BLASTX nr result

ID: Coptis23_contig00025313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025313
         (972 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    76   1e-11
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]    70   6e-10
emb|CCH50966.1| T4.5 [Malus x robusta]                                 62   2e-07
emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera]    59   2e-06
emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]    58   4e-06

>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 52/203 (25%), Positives = 77/203 (37%), Gaps = 1/203 (0%)
 Frame = -3

Query: 922 VNQLKSRLQAITKGSSTIAQYLHCIKQIVDSLTAAGIYVEDVDIVYHILHGLPCEYKPFV 743
           ++ LK +LQ +T+G+ + ++YL   K + D L AAG  V+D D++  +L GL   Y PFV
Sbjct: 122 ISHLKRQLQTLTQGTKSCSEYLESAKTLADQLAAAGKPVDDQDLISFLLGGLQSSYTPFV 181

Query: 742 TSIR-VRHEQXXXXXXXXXXXXXXXXXXXSNRVIQTIEPTSHAFATMTNSGQQSLNQYXX 566
           TS      E                     N  +   +    AFA   +     + +   
Sbjct: 182 TSFNFASRETDFTFEDFQAELLGYENLLDVNHSVHNTDGPHFAFAANKSKAPTYVQK--- 238

Query: 565 XXXXXXXXXXXXXXXXXXXXXFQHNNGYQGHNGFQRYNNHQGNNTFRPTYQICGKKGYVA 386
                                   N     +   Q  +        RP  QICGK G+ A
Sbjct: 239 -------------KGPPLPPTKMQNAASSNYRSQQTRSTPSQLPNNRPVCQICGKSGHTA 285

Query: 385 VDCYHRMSNEFSVRIPPARLAMM 317
           +DC+HR    +  R PP  LA M
Sbjct: 286 IDCFHRFDYSYQGRFPPQDLAAM 308


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 60/232 (25%), Positives = 87/232 (37%), Gaps = 24/232 (10%)
 Frame = -3

Query: 916 QLKSRLQAITKGSSTIAQYLHCIKQIVDSLTAAGIYVEDVDIVYHILHGLPCEYKPFVTS 737
           Q K++LQ   KG STI +YL  IK  VDSL + G+ +   D V  IL GLP +Y+ FVTS
Sbjct: 123 QFKTQLQHTKKGGSTIDEYLAKIKVCVDSLASVGVSLSTKDHVESILDGLPNDYESFVTS 182

Query: 736 IRVRHEQXXXXXXXXXXXXXXXXXXXSNRVIQTIEPTSH-AFATMTNSGQQSLNQYXXXX 560
           + +R++                    +N  + +  P++H A +     G +    Y    
Sbjct: 183 VILRNDDFSVEEIEALLMAHESRVEKNNNSLDS-SPSAHVASSNAVEKGNRFKQDYYAAN 241

Query: 559 XXXXXXXXXXXXXXXXXXXFQHNNGYQGHNGFQ-RYNNHQGNNTFR-------------- 425
                                   G+ G  GF   YN       FR              
Sbjct: 242 SQGSHSGYNGGFGRGGDFG--RRGGFYGGRGFNWNYNGRSNRGGFRGRGNKGSFQARPPW 299

Query: 424 --------PTYQICGKKGYVAVDCYHRMSNEFSVRIPPARLAMMAIKPWCFF 293
                   P  Q+CGK G+V   CY+R  + F V   P  L+     P  ++
Sbjct: 300 NSDNQNEKPACQLCGKIGHVVAQCYYRFDHTFQV---PQNLSSRNSSPRAYY 348


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 31/68 (45%), Positives = 47/68 (69%)
 Frame = -3

Query: 922 VNQLKSRLQAITKGSSTIAQYLHCIKQIVDSLTAAGIYVEDVDIVYHILHGLPCEYKPFV 743
           V+ L+S++Q I KG S++  +L+ IK+I + L AAG  + + D+V +IL GLP EY+ FV
Sbjct: 378 VHSLRSKIQTIHKGDSSMTDFLNSIKEISNKLAAAGEPLSESDLVAYILSGLPDEYESFV 437

Query: 742 TSIRVRHE 719
            SI  R+E
Sbjct: 438 DSIETRNE 445


>emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera]
          Length = 1211

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 31/68 (45%), Positives = 43/68 (63%)
 Frame = -3

Query: 922 VNQLKSRLQAITKGSSTIAQYLHCIKQIVDSLTAAGIYVEDVDIVYHILHGLPCEYKPFV 743
           V Q K++ Q   KG STI +YL  I+  VDSL + G+ +   D V  IL GLP +Y+ FV
Sbjct: 83  VKQFKTQFQHTKKGGSTIDEYLAKIRVCVDSLASIGVSLSTKDHVESILDGLPSDYESFV 142

Query: 742 TSIRVRHE 719
           TSI +R++
Sbjct: 143 TSITLRND 150


>emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]
          Length = 1138

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 31/66 (46%), Positives = 43/66 (65%)
 Frame = -3

Query: 916 QLKSRLQAITKGSSTIAQYLHCIKQIVDSLTAAGIYVEDVDIVYHILHGLPCEYKPFVTS 737
           Q K++LQ   KG STI +YL  IK  VDSL + G+ +   D    IL+GLP +Y+ FVTS
Sbjct: 136 QFKTQLQHTKKGGSTIDEYLVKIKVCVDSLASVGVSLSTKDHFESILNGLPNDYESFVTS 195

Query: 736 IRVRHE 719
           I +R++
Sbjct: 196 ITLRND 201


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