BLASTX nr result

ID: Coptis23_contig00025308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025308
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324414.1| predicted protein [Populus trichocarpa] gi|2...    82   7e-14
ref|XP_002514322.1| conserved hypothetical protein [Ricinus comm...    82   9e-14
ref|XP_002331146.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11
ref|XP_003629642.1| hypothetical protein MTR_8g083460 [Medicago ...    62   7e-08
gb|ABK25772.1| unknown [Picea sitchensis]                              58   1e-06

>ref|XP_002324414.1| predicted protein [Populus trichocarpa] gi|222865848|gb|EEF02979.1|
           predicted protein [Populus trichocarpa]
          Length = 85

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 44/82 (53%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
 Frame = -2

Query: 365 MCHP-GLPFVSYEEKTVQSTWLALRVAAAVDAINRQVGASRQADGGG-VAGSTKQCLCSP 192
           MCHP G+P+VS     V   WL L+   AV+           A G   VAGS K+CLCSP
Sbjct: 1   MCHPPGVPWVS-RNLVVYRRWLVLQ---AVETETGHAPTEVAATGSSAVAGSIKKCLCSP 56

Query: 191 TQHPGSFRCRHHQADYQWGGRI 126
           T+HPGSFRCRHH++DY WGGRI
Sbjct: 57  TRHPGSFRCRHHRSDYVWGGRI 78


>ref|XP_002514322.1| conserved hypothetical protein [Ricinus communis]
           gi|223546778|gb|EEF48276.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 41/90 (45%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
 Frame = -2

Query: 365 MCHPGLPFVSYEEKTVQSTWLALRVAAAVDAINRQVG----------ASRQADGGGVAGS 216
           MC+  +P  S+     +  WL LR   AV  +  Q G          A+  AD GG  GS
Sbjct: 1   MCNQVVPLNSHRALAEEQRWLLLR---AVQLVTEQAGTETANAAAASAAGSADAGGGGGS 57

Query: 215 TKQCLCSPTQHPGSFRCRHHQADYQWGGRI 126
            K C+CSPT+HPGSFRCRHH  DY WG RI
Sbjct: 58  IKMCVCSPTRHPGSFRCRHHHVDYAWGRRI 87


>ref|XP_002331146.1| predicted protein [Populus trichocarpa] gi|222873229|gb|EEF10360.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 38/81 (46%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
 Frame = -2

Query: 365 MCHPGLPFVSYEEKTVQSTWLALRVAAAVDAINRQVGASRQADGGG-VAGSTKQCLCSPT 189
           MCHPG+  VS     V    L L+   AV+           A GG  ++ S  +CLCSPT
Sbjct: 1   MCHPGVLSVSQRNLVVYQRRLVLQ---AVETETSHARTEVAAGGGSAISRSINKCLCSPT 57

Query: 188 QHPGSFRCRHHQADYQWGGRI 126
           +HPGSFRCRHH++DY W GRI
Sbjct: 58  RHPGSFRCRHHRSDYVWSGRI 78


>ref|XP_003629642.1| hypothetical protein MTR_8g083460 [Medicago truncatula]
           gi|357521031|ref|XP_003630804.1| hypothetical protein
           MTR_8g103600 [Medicago truncatula]
           gi|355523664|gb|AET04118.1| hypothetical protein
           MTR_8g083460 [Medicago truncatula]
           gi|355524826|gb|AET05280.1| hypothetical protein
           MTR_8g103600 [Medicago truncatula]
          Length = 83

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
 Frame = -2

Query: 365 MCHPGLPFVSYEEKTVQSTWLALRVAAAVDAINRQVGASRQA-DGGGVAGSTKQCLCSPT 189
           MCH G   +    +  +   + +   A  + +    G +R   D  G  GS KQC+CSP+
Sbjct: 1   MCHEGFFPLYTRCRVFREVQIVVDTVAGEEPVVVVAGQARGGGDRAGEDGSIKQCVCSPS 60

Query: 188 QHPGSFRCRHHQADYQWGGR 129
           +HPGSFRCR HQA Y W  R
Sbjct: 61  KHPGSFRCRQHQAKYVWRNR 80


>gb|ABK25772.1| unknown [Picea sitchensis]
          Length = 88

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
 Frame = -2

Query: 365 MCHPGLPFVSYEEKTVQSTWLALR----VAAAVDAINRQVGASRQADGGGVAGSTKQCLC 198
           MCH   P +  E           R    +  A +A NR +    + +    +G  K CLC
Sbjct: 1   MCHSNWPLIICENSGEDGRNTDYRQHQQLILAEEAGNRLISPRSEEETAEGSGKNKFCLC 60

Query: 197 SPTQHPGSFRCRHHQADYQWGGR 129
           SPT H GSFRCR H++ Y+WG R
Sbjct: 61  SPTNHAGSFRCRLHRSSYKWGRR 83


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