BLASTX nr result
ID: Coptis23_contig00025253
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00025253 (199 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002532105.1| Protein sco1, putative [Ricinus communis] gi... 99 3e-19 gb|ABK24183.1| unknown [Picea sitchensis] 97 1e-18 ref|XP_004169654.1| PREDICTED: protein SCO1 homolog 1, mitochond... 97 1e-18 dbj|BAJ98531.1| predicted protein [Hordeum vulgare subsp. vulgare] 96 2e-18 ref|XP_003529165.1| PREDICTED: protein SCO1 homolog 1, mitochond... 96 3e-18 >ref|XP_002532105.1| Protein sco1, putative [Ricinus communis] gi|223528208|gb|EEF30267.1| Protein sco1, putative [Ricinus communis] Length = 292 Score = 99.4 bits (246), Expect = 3e-19 Identities = 43/65 (66%), Positives = 51/65 (78%) Frame = -3 Query: 197 PFSLVNHEGKYVTDKDFRGKWTVMYFGFTHCPDICPDELQKLVDAVXXXXXXXXXXXIPV 18 PF+L+NH+GK VT+KDF GKWT++YFGFTHCPDICPDELQKLV A+ +PV Sbjct: 132 PFNLINHDGKNVTEKDFMGKWTILYFGFTHCPDICPDELQKLVAAIDKIKEKAGLEVVPV 191 Query: 17 FISVD 3 FISVD Sbjct: 192 FISVD 196 >gb|ABK24183.1| unknown [Picea sitchensis] Length = 331 Score = 97.4 bits (241), Expect = 1e-18 Identities = 43/65 (66%), Positives = 51/65 (78%) Frame = -3 Query: 197 PFSLVNHEGKYVTDKDFRGKWTVMYFGFTHCPDICPDELQKLVDAVXXXXXXXXXXXIPV 18 PF+LVNHEGK VTD+DF GKW+++YFGFTHCPDICPDELQK+V A+ +PV Sbjct: 173 PFNLVNHEGKPVTDRDFTGKWSLIYFGFTHCPDICPDELQKMVAAIDKIKEKAGFEVVPV 232 Query: 17 FISVD 3 FISVD Sbjct: 233 FISVD 237 >ref|XP_004169654.1| PREDICTED: protein SCO1 homolog 1, mitochondrial-like, partial [Cucumis sativus] Length = 162 Score = 97.1 bits (240), Expect = 1e-18 Identities = 44/65 (67%), Positives = 49/65 (75%) Frame = -3 Query: 197 PFSLVNHEGKYVTDKDFRGKWTVMYFGFTHCPDICPDELQKLVDAVXXXXXXXXXXXIPV 18 PF LVNH+GK VT+KDF GKWT++YFGFTHCPDICPDELQKL AV +PV Sbjct: 3 PFKLVNHDGKQVTEKDFFGKWTLLYFGFTHCPDICPDELQKLAAAVDKITEKAGIKIVPV 62 Query: 17 FISVD 3 FISVD Sbjct: 63 FISVD 67 >dbj|BAJ98531.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 326 Score = 96.3 bits (238), Expect = 2e-18 Identities = 42/65 (64%), Positives = 50/65 (76%) Frame = -3 Query: 197 PFSLVNHEGKYVTDKDFRGKWTVMYFGFTHCPDICPDELQKLVDAVXXXXXXXXXXXIPV 18 PFSL+NH+GK VT+KDF GKWT++YFGFTHCPDICPDELQK+ A+ +PV Sbjct: 168 PFSLLNHDGKAVTEKDFLGKWTLLYFGFTHCPDICPDELQKMAAAINKIKEKAKLEIVPV 227 Query: 17 FISVD 3 FISVD Sbjct: 228 FISVD 232 >ref|XP_003529165.1| PREDICTED: protein SCO1 homolog 1, mitochondrial-like [Glycine max] Length = 332 Score = 95.9 bits (237), Expect = 3e-18 Identities = 42/65 (64%), Positives = 49/65 (75%) Frame = -3 Query: 197 PFSLVNHEGKYVTDKDFRGKWTVMYFGFTHCPDICPDELQKLVDAVXXXXXXXXXXXIPV 18 PF L+NH GK+VT+KDF GKWT++YFGFTHCPDICP+ELQKL AV +PV Sbjct: 174 PFCLINHHGKHVTEKDFMGKWTLLYFGFTHCPDICPEELQKLAAAVDKIKEKAGIETVPV 233 Query: 17 FISVD 3 FISVD Sbjct: 234 FISVD 238