BLASTX nr result

ID: Coptis23_contig00025253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025253
         (199 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532105.1| Protein sco1, putative [Ricinus communis] gi...    99   3e-19
gb|ABK24183.1| unknown [Picea sitchensis]                              97   1e-18
ref|XP_004169654.1| PREDICTED: protein SCO1 homolog 1, mitochond...    97   1e-18
dbj|BAJ98531.1| predicted protein [Hordeum vulgare subsp. vulgare]     96   2e-18
ref|XP_003529165.1| PREDICTED: protein SCO1 homolog 1, mitochond...    96   3e-18

>ref|XP_002532105.1| Protein sco1, putative [Ricinus communis]
           gi|223528208|gb|EEF30267.1| Protein sco1, putative
           [Ricinus communis]
          Length = 292

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 43/65 (66%), Positives = 51/65 (78%)
 Frame = -3

Query: 197 PFSLVNHEGKYVTDKDFRGKWTVMYFGFTHCPDICPDELQKLVDAVXXXXXXXXXXXIPV 18
           PF+L+NH+GK VT+KDF GKWT++YFGFTHCPDICPDELQKLV A+           +PV
Sbjct: 132 PFNLINHDGKNVTEKDFMGKWTILYFGFTHCPDICPDELQKLVAAIDKIKEKAGLEVVPV 191

Query: 17  FISVD 3
           FISVD
Sbjct: 192 FISVD 196


>gb|ABK24183.1| unknown [Picea sitchensis]
          Length = 331

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 43/65 (66%), Positives = 51/65 (78%)
 Frame = -3

Query: 197 PFSLVNHEGKYVTDKDFRGKWTVMYFGFTHCPDICPDELQKLVDAVXXXXXXXXXXXIPV 18
           PF+LVNHEGK VTD+DF GKW+++YFGFTHCPDICPDELQK+V A+           +PV
Sbjct: 173 PFNLVNHEGKPVTDRDFTGKWSLIYFGFTHCPDICPDELQKMVAAIDKIKEKAGFEVVPV 232

Query: 17  FISVD 3
           FISVD
Sbjct: 233 FISVD 237


>ref|XP_004169654.1| PREDICTED: protein SCO1 homolog 1, mitochondrial-like, partial
           [Cucumis sativus]
          Length = 162

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/65 (67%), Positives = 49/65 (75%)
 Frame = -3

Query: 197 PFSLVNHEGKYVTDKDFRGKWTVMYFGFTHCPDICPDELQKLVDAVXXXXXXXXXXXIPV 18
           PF LVNH+GK VT+KDF GKWT++YFGFTHCPDICPDELQKL  AV           +PV
Sbjct: 3   PFKLVNHDGKQVTEKDFFGKWTLLYFGFTHCPDICPDELQKLAAAVDKITEKAGIKIVPV 62

Query: 17  FISVD 3
           FISVD
Sbjct: 63  FISVD 67


>dbj|BAJ98531.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 326

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 42/65 (64%), Positives = 50/65 (76%)
 Frame = -3

Query: 197 PFSLVNHEGKYVTDKDFRGKWTVMYFGFTHCPDICPDELQKLVDAVXXXXXXXXXXXIPV 18
           PFSL+NH+GK VT+KDF GKWT++YFGFTHCPDICPDELQK+  A+           +PV
Sbjct: 168 PFSLLNHDGKAVTEKDFLGKWTLLYFGFTHCPDICPDELQKMAAAINKIKEKAKLEIVPV 227

Query: 17  FISVD 3
           FISVD
Sbjct: 228 FISVD 232


>ref|XP_003529165.1| PREDICTED: protein SCO1 homolog 1, mitochondrial-like [Glycine max]
          Length = 332

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 42/65 (64%), Positives = 49/65 (75%)
 Frame = -3

Query: 197 PFSLVNHEGKYVTDKDFRGKWTVMYFGFTHCPDICPDELQKLVDAVXXXXXXXXXXXIPV 18
           PF L+NH GK+VT+KDF GKWT++YFGFTHCPDICP+ELQKL  AV           +PV
Sbjct: 174 PFCLINHHGKHVTEKDFMGKWTLLYFGFTHCPDICPEELQKLAAAVDKIKEKAGIETVPV 233

Query: 17  FISVD 3
           FISVD
Sbjct: 234 FISVD 238


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