BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025246
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Rici...    60   2e-07
ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitoch...    59   3e-07
ref|XP_002310275.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002867017.1| ribosomal protein L12 family protein [Arabid...    58   7e-07
ref|NP_195360.1| Ribosomal protein L12 family protein [Arabidops...    58   7e-07

>ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223539188|gb|EEF40781.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 192

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -2

Query: 238 KDLVEKAPTLLKKGVTKEEAQKIIDKMKEIGAK 140
           KDLVEKAPTLLKKGVTKEEA+KI  KMKE+GAK
Sbjct: 156 KDLVEKAPTLLKKGVTKEEAEKITAKMKEVGAK 188


>ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Cucumis
           sativus] gi|449491404|ref|XP_004158886.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449491408|ref|XP_004158887.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
          Length = 202

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -2

Query: 238 KDLVEKAPTLLKKGVTKEEAQKIIDKMKEIGAK 140
           KDLVEKAPTLLKKGVTKEEA+ II KMKE+GAK
Sbjct: 166 KDLVEKAPTLLKKGVTKEEAETIIAKMKEVGAK 198


>ref|XP_002310275.1| predicted protein [Populus trichocarpa] gi|222853178|gb|EEE90725.1|
           predicted protein [Populus trichocarpa]
          Length = 147

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = -2

Query: 238 KDLVEKAPTLLKKGVTKEEAQKIIDKMKEIGAK 140
           KDLVEKAPTLLKKGVTK+EA+KII+KMK +GAK
Sbjct: 111 KDLVEKAPTLLKKGVTKDEAEKIIEKMKGVGAK 143


>ref|XP_002867017.1| ribosomal protein L12 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297312853|gb|EFH43276.1| ribosomal protein
           L12 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 179

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/33 (81%), Positives = 32/33 (96%)
 Frame = -2

Query: 238 KDLVEKAPTLLKKGVTKEEAQKIIDKMKEIGAK 140
           KDLVEKAPTLLKKGV+KEEA+KII+K+K +GAK
Sbjct: 143 KDLVEKAPTLLKKGVSKEEAEKIIEKLKAVGAK 175


>ref|NP_195360.1| Ribosomal protein L12 family protein [Arabidopsis thaliana]
           gi|13878063|gb|AAK44109.1|AF370294_1 putative ribosomal
           protein [Arabidopsis thaliana]
           gi|4006919|emb|CAB16813.1| ribosomal protein
           [Arabidopsis thaliana] gi|7270590|emb|CAB80308.1|
           ribosomal protein [Arabidopsis thaliana]
           gi|15450415|gb|AAK96501.1| At4g36420/C7A10_940
           [Arabidopsis thaliana] gi|17104653|gb|AAL34215.1|
           putative ribosomal protein [Arabidopsis thaliana]
           gi|332661254|gb|AEE86654.1| Ribosomal protein L12 family
           protein [Arabidopsis thaliana]
          Length = 179

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/33 (81%), Positives = 32/33 (96%)
 Frame = -2

Query: 238 KDLVEKAPTLLKKGVTKEEAQKIIDKMKEIGAK 140
           KDLVEKAPTLLKKGV+KEEA+KII+K+K +GAK
Sbjct: 143 KDLVEKAPTLLKKGVSKEEAEKIIEKLKAVGAK 175