BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025232
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21248.3| unnamed protein product [Vitis vinifera]              252   2e-65
ref|XP_002276313.1| PREDICTED: transcription-repair-coupling fac...   252   2e-65
ref|XP_003548486.1| PREDICTED: transcription-repair-coupling fac...   249   1e-64
ref|XP_002512803.1| dead box ATP-dependent RNA helicase, putativ...   247   8e-64
ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis th...   246   2e-63

>emb|CBI21248.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  252 bits (644), Expect = 2e-65
 Identities = 123/143 (86%), Positives = 135/143 (94%)
 Frame = +1

Query: 1   AKLPVKQAAKMLYRYNLPNEAKRPRTLSKLSDTSVWEKRRIKGKIAIQKMVVDLMELYLH 180
           AKLPVKQA++MLYRYNLP+E+KRPRTLSKLSDTS+WE+RRIKG++AIQKMVVDLMELYLH
Sbjct: 2   AKLPVKQASRMLYRYNLPSESKRPRTLSKLSDTSIWERRRIKGRVAIQKMVVDLMELYLH 61

Query: 181 RLKQKRPLYPKTTAMAEFAAEFPYQPTPDQKQAFIDVEKDLTERETPMDRLICGDVGFGK 360
           RLKQKRP YPK+  MAEF A+F Y+PTPDQKQAFIDVE+DLTERETPMDRLICGDVGFGK
Sbjct: 62  RLKQKRPPYPKSPGMAEFEAQFSYEPTPDQKQAFIDVEEDLTERETPMDRLICGDVGFGK 121

Query: 361 TEVALRAIFSVVSTRKQAMVLAP 429
           TEVALRAIF VVS  KQAMVLAP
Sbjct: 122 TEVALRAIFCVVSAGKQAMVLAP 144


>ref|XP_002276313.1| PREDICTED: transcription-repair-coupling factor-like [Vitis
           vinifera]
          Length = 823

 Score =  252 bits (644), Expect = 2e-65
 Identities = 123/143 (86%), Positives = 135/143 (94%)
 Frame = +1

Query: 1   AKLPVKQAAKMLYRYNLPNEAKRPRTLSKLSDTSVWEKRRIKGKIAIQKMVVDLMELYLH 180
           AKLPVKQA++MLYRYNLP+E+KRPRTLSKLSDTS+WE+RRIKG++AIQKMVVDLMELYLH
Sbjct: 185 AKLPVKQASRMLYRYNLPSESKRPRTLSKLSDTSIWERRRIKGRVAIQKMVVDLMELYLH 244

Query: 181 RLKQKRPLYPKTTAMAEFAAEFPYQPTPDQKQAFIDVEKDLTERETPMDRLICGDVGFGK 360
           RLKQKRP YPK+  MAEF A+F Y+PTPDQKQAFIDVE+DLTERETPMDRLICGDVGFGK
Sbjct: 245 RLKQKRPPYPKSPGMAEFEAQFSYEPTPDQKQAFIDVEEDLTERETPMDRLICGDVGFGK 304

Query: 361 TEVALRAIFSVVSTRKQAMVLAP 429
           TEVALRAIF VVS  KQAMVLAP
Sbjct: 305 TEVALRAIFCVVSAGKQAMVLAP 327


>ref|XP_003548486.1| PREDICTED: transcription-repair-coupling factor-like [Glycine max]
          Length = 826

 Score =  249 bits (637), Expect = 1e-64
 Identities = 121/143 (84%), Positives = 134/143 (93%)
 Frame = +1

Query: 1   AKLPVKQAAKMLYRYNLPNEAKRPRTLSKLSDTSVWEKRRIKGKIAIQKMVVDLMELYLH 180
           AKLPV +AAKMLYRY+LPNE K+P+ LSKLSDTS WEKR++KGK+AIQKMVVDLMELYLH
Sbjct: 188 AKLPVNKAAKMLYRYSLPNETKKPKALSKLSDTSAWEKRKVKGKVAIQKMVVDLMELYLH 247

Query: 181 RLKQKRPLYPKTTAMAEFAAEFPYQPTPDQKQAFIDVEKDLTERETPMDRLICGDVGFGK 360
           RLKQ+RPLYPK+ AMAEFAA FPY+PTPDQK+AFIDVE+DLTERETPMDRLICGDVGFGK
Sbjct: 248 RLKQRRPLYPKSPAMAEFAALFPYEPTPDQKRAFIDVERDLTERETPMDRLICGDVGFGK 307

Query: 361 TEVALRAIFSVVSTRKQAMVLAP 429
           TEVALRAI  VVS +KQAMVLAP
Sbjct: 308 TEVALRAISCVVSAKKQAMVLAP 330


>ref|XP_002512803.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223547814|gb|EEF49306.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 857

 Score =  247 bits (630), Expect = 8e-64
 Identities = 122/143 (85%), Positives = 131/143 (91%)
 Frame = +1

Query: 1   AKLPVKQAAKMLYRYNLPNEAKRPRTLSKLSDTSVWEKRRIKGKIAIQKMVVDLMELYLH 180
           AKLPVKQA+KMLYRY+LPNE KRPRTL+KL+DTS WEKR+ KGKIAIQKMVVDLMELYLH
Sbjct: 187 AKLPVKQASKMLYRYSLPNEKKRPRTLNKLNDTSTWEKRKTKGKIAIQKMVVDLMELYLH 246

Query: 181 RLKQKRPLYPKTTAMAEFAAEFPYQPTPDQKQAFIDVEKDLTERETPMDRLICGDVGFGK 360
           RLKQ+RP YPK+  MAEF A+FPY+PTPDQ QAF DVEKDLTERETPMDRLICGDVGFGK
Sbjct: 247 RLKQRRPPYPKSPVMAEFTAQFPYEPTPDQFQAFNDVEKDLTERETPMDRLICGDVGFGK 306

Query: 361 TEVALRAIFSVVSTRKQAMVLAP 429
           TEVALRAIF VVS  KQAMVLAP
Sbjct: 307 TEVALRAIFCVVSAGKQAMVLAP 329


>ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana]
           gi|332640233|gb|AEE73754.1| putative DEAD/DEAH box
           helicase [Arabidopsis thaliana]
          Length = 823

 Score =  246 bits (627), Expect = 2e-63
 Identities = 120/143 (83%), Positives = 132/143 (92%)
 Frame = +1

Query: 1   AKLPVKQAAKMLYRYNLPNEAKRPRTLSKLSDTSVWEKRRIKGKIAIQKMVVDLMELYLH 180
           AKLP+KQA+++LYRYNLPNE KRPRTLS+LSDTSVWE+R+ KGK+AIQKMVVDLMELYLH
Sbjct: 185 AKLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMVVDLMELYLH 244

Query: 181 RLKQKRPLYPKTTAMAEFAAEFPYQPTPDQKQAFIDVEKDLTERETPMDRLICGDVGFGK 360
           RL+QKR  YPK   MA+FAA+FPY  TPDQKQAF+DVEKDLTERETPMDRLICGDVGFGK
Sbjct: 245 RLRQKRYPYPKNPIMADFAAQFPYNATPDQKQAFLDVEKDLTERETPMDRLICGDVGFGK 304

Query: 361 TEVALRAIFSVVSTRKQAMVLAP 429
           TEVALRAIF VVST KQAMVLAP
Sbjct: 305 TEVALRAIFCVVSTGKQAMVLAP 327