BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025231
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33152.1| Helicase, C-terminal; Haem peroxidase, plant/fung...   116   2e-24
ref|XP_003624531.1| Transcription-repair-coupling factor [Medica...   116   2e-24
dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila]     110   9e-23
gb|AAN72199.1| putative helicase [Arabidopsis thaliana]               108   4e-22
ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis th...   108   4e-22

>gb|ABD33152.1| Helicase, C-terminal; Haem peroxidase, plant/fungal/bacterial
           [Medicago truncatula]
          Length = 494

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/64 (90%), Positives = 60/64 (93%)
 Frame = -3

Query: 257 SERFSQYPHIKVGLLSRFQTRSEKEVYLSMIKNGDLDIIVGTHALLGSRVVYNNLGLLVV 78
           SERFS YP IKVGLLSRFQTRSEKE YL MIKNGDLDIIVGTH+LLG+RVVYNNLGLLVV
Sbjct: 173 SERFSVYPDIKVGLLSRFQTRSEKEAYLEMIKNGDLDIIVGTHSLLGNRVVYNNLGLLVV 232

Query: 77  DEEQ 66
           DEEQ
Sbjct: 233 DEEQ 236


>ref|XP_003624531.1| Transcription-repair-coupling factor [Medicago truncatula]
           gi|355499546|gb|AES80749.1|
           Transcription-repair-coupling factor [Medicago
           truncatula]
          Length = 503

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/64 (90%), Positives = 60/64 (93%)
 Frame = -3

Query: 257 SERFSQYPHIKVGLLSRFQTRSEKEVYLSMIKNGDLDIIVGTHALLGSRVVYNNLGLLVV 78
           SERFS YP IKVGLLSRFQTRSEKE YL MIKNGDLDIIVGTH+LLG+RVVYNNLGLLVV
Sbjct: 157 SERFSVYPDIKVGLLSRFQTRSEKEAYLEMIKNGDLDIIVGTHSLLGNRVVYNNLGLLVV 216

Query: 77  DEEQ 66
           DEEQ
Sbjct: 217 DEEQ 220


>dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila]
          Length = 823

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/64 (85%), Positives = 60/64 (93%)
 Frame = -3

Query: 257 SERFSQYPHIKVGLLSRFQTRSEKEVYLSMIKNGDLDIIVGTHALLGSRVVYNNLGLLVV 78
           SERFS YP IKVGLLSRFQT++EKE YL MIKNGDL+IIVGTH+LLGSRVVY+NLGLLVV
Sbjct: 340 SERFSLYPQIKVGLLSRFQTKAEKEEYLEMIKNGDLNIIVGTHSLLGSRVVYSNLGLLVV 399

Query: 77  DEEQ 66
           DEEQ
Sbjct: 400 DEEQ 403


>gb|AAN72199.1| putative helicase [Arabidopsis thaliana]
          Length = 822

 Score =  108 bits (271), Expect = 4e-22
 Identities = 54/64 (84%), Positives = 59/64 (92%)
 Frame = -3

Query: 257 SERFSQYPHIKVGLLSRFQTRSEKEVYLSMIKNGDLDIIVGTHALLGSRVVYNNLGLLVV 78
           SERFS YPHIKVGLLSRFQT++EKE YL MIK G L+IIVGTH+LLGSRVVY+NLGLLVV
Sbjct: 339 SERFSLYPHIKVGLLSRFQTKAEKEEYLEMIKTGHLNIIVGTHSLLGSRVVYSNLGLLVV 398

Query: 77  DEEQ 66
           DEEQ
Sbjct: 399 DEEQ 402


>ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana]
           gi|332640233|gb|AEE73754.1| putative DEAD/DEAH box
           helicase [Arabidopsis thaliana]
          Length = 823

 Score =  108 bits (271), Expect = 4e-22
 Identities = 54/64 (84%), Positives = 59/64 (92%)
 Frame = -3

Query: 257 SERFSQYPHIKVGLLSRFQTRSEKEVYLSMIKNGDLDIIVGTHALLGSRVVYNNLGLLVV 78
           SERFS YPHIKVGLLSRFQT++EKE YL MIK G L+IIVGTH+LLGSRVVY+NLGLLVV
Sbjct: 340 SERFSLYPHIKVGLLSRFQTKAEKEEYLEMIKTGHLNIIVGTHSLLGSRVVYSNLGLLVV 399

Query: 77  DEEQ 66
           DEEQ
Sbjct: 400 DEEQ 403