BLASTX nr result

ID: Coptis23_contig00025214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025214
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518108.1| DNA binding protein, putative [Ricinus commu...   107   1e-21
ref|XP_002266835.1| PREDICTED: transcription factor FAMA [Vitis ...   106   2e-21
emb|CAN60177.1| hypothetical protein VITISV_027832 [Vitis vinifera]   106   2e-21
emb|CBI17322.3| unnamed protein product [Vitis vinifera]               92   6e-17
ref|XP_003516270.1| PREDICTED: uncharacterized protein LOC100813...    87   1e-15

>ref|XP_002518108.1| DNA binding protein, putative [Ricinus communis]
           gi|223542704|gb|EEF44241.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 411

 Score =  107 bits (266), Expect = 1e-21
 Identities = 54/72 (75%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
 Frame = -2

Query: 214 ENNVEMVDYMFNNPPHQQISTS-FGGSNSLDKLNFAEVMQFADFGPKLALNQTKINAEEN 38
           ++N  M+DYM NNP  Q IS+S F  SNSLDKL+FA+VMQFADFGPKLALNQTKI+ EE 
Sbjct: 48  DSNSGMIDYMLNNPHQQLISSSGFCTSNSLDKLSFADVMQFADFGPKLALNQTKISEEET 107

Query: 37  GIDPVYFLKFPV 2
           GIDPVYFLKFPV
Sbjct: 108 GIDPVYFLKFPV 119


>ref|XP_002266835.1| PREDICTED: transcription factor FAMA [Vitis vinifera]
          Length = 400

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/71 (70%), Positives = 61/71 (85%)
 Frame = -2

Query: 214 ENNVEMVDYMFNNPPHQQISTSFGGSNSLDKLNFAEVMQFADFGPKLALNQTKINAEENG 35
           +NN  +VDYM +NP HQQ+++S   S+S DKL+FA+VMQFADFGPKLALNQTK++ EE G
Sbjct: 45  DNNHGVVDYMLSNPQHQQLTSSGFCSSSFDKLSFADVMQFADFGPKLALNQTKVSEEETG 104

Query: 34  IDPVYFLKFPV 2
           IDPVYFLKFPV
Sbjct: 105 IDPVYFLKFPV 115


>emb|CAN60177.1| hypothetical protein VITISV_027832 [Vitis vinifera]
          Length = 422

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/71 (70%), Positives = 61/71 (85%)
 Frame = -2

Query: 214 ENNVEMVDYMFNNPPHQQISTSFGGSNSLDKLNFAEVMQFADFGPKLALNQTKINAEENG 35
           +NN  +VDYM +NP HQQ+++S   S+S DKL+FA+VMQFADFGPKLALNQTK++ EE G
Sbjct: 45  DNNHGVVDYMLSNPQHQQLTSSGFCSSSFDKLSFADVMQFADFGPKLALNQTKVSEEETG 104

Query: 34  IDPVYFLKFPV 2
           IDPVYFLKFPV
Sbjct: 105 IDPVYFLKFPV 115


>emb|CBI17322.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/65 (66%), Positives = 54/65 (83%)
 Frame = -2

Query: 214 ENNVEMVDYMFNNPPHQQISTSFGGSNSLDKLNFAEVMQFADFGPKLALNQTKINAEENG 35
           +NN  +VDYM +NP HQQ+++S   S+S DKL+FA+VMQFADFGPKLALNQTK++ EE G
Sbjct: 42  DNNHGVVDYMLSNPQHQQLTSSGFCSSSFDKLSFADVMQFADFGPKLALNQTKVSEEETG 101

Query: 34  IDPVY 20
           IDP Y
Sbjct: 102 IDPRY 106


>ref|XP_003516270.1| PREDICTED: uncharacterized protein LOC100813515 [Glycine max]
          Length = 811

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 46/71 (64%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
 Frame = -2

Query: 211 NNVEMVDYM-FNNPPHQQISTSFGGSNSLDKLNFAEVMQFADFGPKLALNQTKINAEENG 35
           NN  MVDYM    PPH     +   + S DKL+FA+VMQFADFGPKLALNQ K N EE+ 
Sbjct: 433 NNGSMVDYMPQTTPPHGFYGATSAATTSYDKLSFADVMQFADFGPKLALNQAK-NCEESA 491

Query: 34  IDPVYFLKFPV 2
           IDPVYFLKFPV
Sbjct: 492 IDPVYFLKFPV 502


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