BLASTX nr result
ID: Coptis23_contig00025210
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00025210
(607 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containi... 327 8e-88
emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera] 327 8e-88
ref|XP_002329666.1| predicted protein [Populus trichocarpa] gi|2... 327 1e-87
ref|NP_179484.1| pentatricopeptide repeat-containing protein [Ar... 320 9e-86
ref|XP_002884184.1| pentatricopeptide repeat-containing protein ... 318 5e-85
>ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera] gi|297735424|emb|CBI17864.3| unnamed
protein product [Vitis vinifera]
Length = 821
Score = 327 bits (839), Expect = 8e-88
Identities = 155/201 (77%), Positives = 174/201 (86%)
Frame = -2
Query: 606 GMLEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTF 427
G+L+EA KFF +KS+GYV GT +YN+LL V+GKAGIY+EAL IL EME+N CPPD VT+
Sbjct: 294 GLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTY 353
Query: 426 NELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKE 247
NELV+AYV+AGF EEGA IDTM KGI PNAITYTTVI+AYGKAGKEDKALS F QMKE
Sbjct: 354 NELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKE 413
Query: 246 LGCVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKY 67
GCVP VCTYNAILGMLGKKSR EEM+ +LCDM+SNGC PN +TWNTMLAMCGNKG KY
Sbjct: 414 SGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKY 473
Query: 66 VNRVFREMKNCGLEPDRDTFN 4
VNRVFREMK+CG EP+RDTFN
Sbjct: 474 VNRVFREMKSCGFEPNRDTFN 494
Score = 112 bits (279), Expect = 7e-23
Identities = 61/195 (31%), Positives = 101/195 (51%)
Frame = -2
Query: 606 GMLEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTF 427
G ++A FF ++K G VP +YNA+L + GK E + +L +M N C P++VT+
Sbjct: 399 GKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTW 458
Query: 426 NELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKE 247
N +++ G + V M S G PN T+ +I AYG+ G + + ++ +M +
Sbjct: 459 NTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIK 518
Query: 246 LGCVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKY 67
G P V TYNA+L L ++ E S++ DMKS G PN +++ ML G +
Sbjct: 519 AGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRG 578
Query: 66 VNRVFREMKNCGLEP 22
+ ++ E+ N + P
Sbjct: 579 IEKIEEEIYNGHIFP 593
Score = 99.4 bits (246), Expect = 4e-19
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
Frame = -2
Query: 591 ASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVS 412
A + DEI + Y ++ +LH Y + G Y A+ + ++M + P VT+N ++
Sbjct: 193 ALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLD 252
Query: 411 AYVKAG-FIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCV 235
Y K G + ++D M S G+ + T +TVI A G+ G D+A F ++K G V
Sbjct: 253 VYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYV 312
Query: 234 PTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKYVNRV 55
TYN++L + GK E +SIL +M+ N C P+ +T+N ++A G +
Sbjct: 313 AGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADF 372
Query: 54 FREMKNCGLEPDRDTFNT 1
M G+ P+ T+ T
Sbjct: 373 IDTMIRKGIMPNAITYTT 390
Score = 83.2 bits (204), Expect = 3e-14
Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Frame = -2
Query: 525 LLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVKAGFIEEGAAVIDTMTSKG 346
++ + G+ ++ AL +LDE+ + D + ++ AY + G E + + M G
Sbjct: 180 MVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTG 239
Query: 345 ITPNAITYTTVIDAYGKAGKE-DKALSLFGQMKELGCVPTVCTYNAILGMLGKKSRSEEM 169
++P +TY ++D YGK G+ +K L L +M+ G T + ++ G++ +E
Sbjct: 240 LSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEA 299
Query: 168 MSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKYVNRVFREMKNCGLEPDRDTFN 4
+KS G V T+N++L + G G + +EM+ PD T+N
Sbjct: 300 RKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYN 354
Score = 83.2 bits (204), Expect = 3e-14
Identities = 42/160 (26%), Positives = 76/160 (47%)
Frame = -2
Query: 579 FDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVK 400
F E GY P V +N++L ++ K +Y A +L + + PD VT+N L+ Y +
Sbjct: 618 FQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYAR 677
Query: 399 AGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCVPTVCT 220
G +G ++ + G P+ ++Y TVI + + G +A+ +M G P + T
Sbjct: 678 GGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVT 737
Query: 219 YNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTML 100
YN + K E+ ++ M + C PN +T+ ++
Sbjct: 738 YNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVV 777
Score = 79.0 bits (193), Expect = 6e-13
Identities = 51/200 (25%), Positives = 90/200 (45%)
Frame = -2
Query: 600 LEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNE 421
LEE +++S G P +V++N +L + G G++ + EM+ P+ TFN
Sbjct: 436 LEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNA 495
Query: 420 LVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELG 241
L+ AY + G + + + M G TP TY +++A + G + A S+ MK G
Sbjct: 496 LIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKG 555
Query: 240 CVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKYVN 61
P +Y+ +L K + I ++ + P+ I T++ + A +
Sbjct: 556 FKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGME 615
Query: 60 RVFREMKNCGLEPDRDTFNT 1
R F+E G +PD FN+
Sbjct: 616 RAFQEFCKHGYKPDLVLFNS 635
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/152 (24%), Positives = 71/152 (46%)
Frame = -2
Query: 603 MLEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFN 424
M + A + I+ G P V+YN+L+ +Y + G + IL ++++ PD V++N
Sbjct: 645 MYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYN 704
Query: 423 ELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKEL 244
++ + + G ++E + MT GI P +TY T + Y G + + M +
Sbjct: 705 TVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQH 764
Query: 243 GCVPTVCTYNAILGMLGKKSRSEEMMSILCDM 148
C P TY ++ K + +E M + ++
Sbjct: 765 DCRPNELTYKIVVDGYCKGKKYKEAMDFVSNI 796
Score = 72.0 bits (175), Expect = 8e-11
Identities = 47/202 (23%), Positives = 88/202 (43%)
Frame = -2
Query: 606 GMLEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTF 427
G E A ++KS+G+ P SY+ +L+ Y K G I +E+ P +
Sbjct: 539 GDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILL 598
Query: 426 NELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKE 247
LV A K + G P+ + + +++ + K D+A + ++E
Sbjct: 599 RTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRE 658
Query: 246 LGCVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKY 67
G P + TYN+++ M + + IL ++ +G P+ +++NT++ +G +
Sbjct: 659 SGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQE 718
Query: 66 VNRVFREMKNCGLEPDRDTFNT 1
R EM G+ P T+NT
Sbjct: 719 AIRTLSEMTISGIRPCIVTYNT 740
Score = 63.2 bits (152), Expect = 4e-08
Identities = 35/109 (32%), Positives = 51/109 (46%)
Frame = -2
Query: 570 IKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVKAGF 391
I+ G P VSYN ++ + + G+ EA+ L EM + P VT+N V+ Y G
Sbjct: 691 IQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGM 750
Query: 390 IEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKEL 244
E VI M PN +TY V+D Y K K +A+ + E+
Sbjct: 751 FSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNITEM 799
>emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 327 bits (839), Expect = 8e-88
Identities = 155/201 (77%), Positives = 174/201 (86%)
Frame = -2
Query: 606 GMLEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTF 427
G+L+EA KFF +KS+GYV GT +YN+LL V+GKAGIY+EAL IL EME+N CPPD VT+
Sbjct: 294 GLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTY 353
Query: 426 NELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKE 247
NELV+AYV+AGF EEGA IDTM KGI PNAITYTTVI+AYGKAGKEDKALS F QMKE
Sbjct: 354 NELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKE 413
Query: 246 LGCVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKY 67
GCVP VCTYNAILGMLGKKSR EEM+ +LCDM+SNGC PN +TWNTMLAMCGNKG KY
Sbjct: 414 SGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKY 473
Query: 66 VNRVFREMKNCGLEPDRDTFN 4
VNRVFREMK+CG EP+RDTFN
Sbjct: 474 VNRVFREMKSCGFEPNRDTFN 494
Score = 112 bits (279), Expect = 7e-23
Identities = 61/195 (31%), Positives = 101/195 (51%)
Frame = -2
Query: 606 GMLEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTF 427
G ++A FF ++K G VP +YNA+L + GK E + +L +M N C P++VT+
Sbjct: 399 GKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTW 458
Query: 426 NELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKE 247
N +++ G + V M S G PN T+ +I AYG+ G + + ++ +M +
Sbjct: 459 NTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIK 518
Query: 246 LGCVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKY 67
G P V TYNA+L L ++ E S++ DMKS G PN +++ ML G +
Sbjct: 519 AGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRG 578
Query: 66 VNRVFREMKNCGLEP 22
+ ++ E+ N + P
Sbjct: 579 IEKIEEEIYNGHIFP 593
Score = 99.4 bits (246), Expect = 4e-19
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
Frame = -2
Query: 591 ASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVS 412
A + DEI + Y ++ +LH Y + G Y A+ + ++M + P VT+N ++
Sbjct: 193 ALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLD 252
Query: 411 AYVKAG-FIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCV 235
Y K G + ++D M S G+ + T +TVI A G+ G D+A F ++K G V
Sbjct: 253 VYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYV 312
Query: 234 PTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKYVNRV 55
TYN++L + GK E +SIL +M+ N C P+ +T+N ++A G +
Sbjct: 313 AGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADF 372
Query: 54 FREMKNCGLEPDRDTFNT 1
M G+ P+ T+ T
Sbjct: 373 IDTMIRKGIMPNAITYTT 390
Score = 83.2 bits (204), Expect = 3e-14
Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Frame = -2
Query: 525 LLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVKAGFIEEGAAVIDTMTSKG 346
++ + G+ ++ AL +LDE+ + D + ++ AY + G E + + M G
Sbjct: 180 MVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTG 239
Query: 345 ITPNAITYTTVIDAYGKAGKE-DKALSLFGQMKELGCVPTVCTYNAILGMLGKKSRSEEM 169
++P +TY ++D YGK G+ +K L L +M+ G T + ++ G++ +E
Sbjct: 240 LSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEA 299
Query: 168 MSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKYVNRVFREMKNCGLEPDRDTFN 4
+KS G V T+N++L + G G + +EM+ PD T+N
Sbjct: 300 RKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYN 354
Score = 83.2 bits (204), Expect = 3e-14
Identities = 42/160 (26%), Positives = 76/160 (47%)
Frame = -2
Query: 579 FDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVK 400
F E GY P V +N++L ++ K +Y A +L + + PD VT+N L+ Y +
Sbjct: 618 FQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYAR 677
Query: 399 AGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCVPTVCT 220
G +G ++ + G P+ ++Y TVI + + G +A+ +M G P + T
Sbjct: 678 GGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVT 737
Query: 219 YNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTML 100
YN + K E+ ++ M + C PN +T+ ++
Sbjct: 738 YNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVV 777
Score = 79.0 bits (193), Expect = 6e-13
Identities = 51/200 (25%), Positives = 90/200 (45%)
Frame = -2
Query: 600 LEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNE 421
LEE +++S G P +V++N +L + G G++ + EM+ P+ TFN
Sbjct: 436 LEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNA 495
Query: 420 LVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELG 241
L+ AY + G + + + M G TP TY +++A + G + A S+ MK G
Sbjct: 496 LIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKG 555
Query: 240 CVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKYVN 61
P +Y+ +L K + I ++ + P+ I T++ + A +
Sbjct: 556 FKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGME 615
Query: 60 RVFREMKNCGLEPDRDTFNT 1
R F+E G +PD FN+
Sbjct: 616 RAFQEFCKHGYKPDLVLFNS 635
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/152 (24%), Positives = 71/152 (46%)
Frame = -2
Query: 603 MLEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFN 424
M + A + I+ G P V+YN+L+ +Y + G + IL ++++ PD V++N
Sbjct: 645 MYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYN 704
Query: 423 ELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKEL 244
++ + + G ++E + MT GI P +TY T + Y G + + M +
Sbjct: 705 TVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQH 764
Query: 243 GCVPTVCTYNAILGMLGKKSRSEEMMSILCDM 148
C P TY ++ K + +E M + ++
Sbjct: 765 DCRPNELTYKIVVDGYCKGKKYKEAMDFVSNI 796
Score = 72.0 bits (175), Expect = 8e-11
Identities = 47/202 (23%), Positives = 88/202 (43%)
Frame = -2
Query: 606 GMLEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTF 427
G E A ++KS+G+ P SY+ +L+ Y K G I +E+ P +
Sbjct: 539 GDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILL 598
Query: 426 NELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKE 247
LV A K + G P+ + + +++ + K D+A + ++E
Sbjct: 599 RTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRE 658
Query: 246 LGCVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKY 67
G P + TYN+++ M + + IL ++ +G P+ +++NT++ +G +
Sbjct: 659 SGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQE 718
Query: 66 VNRVFREMKNCGLEPDRDTFNT 1
R EM G+ P T+NT
Sbjct: 719 AIRTLSEMTISGIRPCIVTYNT 740
Score = 63.2 bits (152), Expect = 4e-08
Identities = 35/109 (32%), Positives = 51/109 (46%)
Frame = -2
Query: 570 IKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVKAGF 391
I+ G P VSYN ++ + + G+ EA+ L EM + P VT+N V+ Y G
Sbjct: 691 IQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGM 750
Query: 390 IEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKEL 244
E VI M PN +TY V+D Y K K +A+ + E+
Sbjct: 751 FSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNITEM 799
>ref|XP_002329666.1| predicted protein [Populus trichocarpa] gi|222870547|gb|EEF07678.1|
predicted protein [Populus trichocarpa]
Length = 821
Score = 327 bits (838), Expect = 1e-87
Identities = 153/202 (75%), Positives = 176/202 (87%)
Frame = -2
Query: 606 GMLEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTF 427
G+L+EA +FF +KSQGY PGTV+YNALL V+GKAGIY+EAL I+ EME N CPPDAVT+
Sbjct: 294 GLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTY 353
Query: 426 NELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKE 247
NELV+AYV+AGF EEGAA+IDTMT GI PNA+TYTT+I+AYG+A + DKALSL+ QMKE
Sbjct: 354 NELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKE 413
Query: 246 LGCVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKY 67
GC P VCTYNAILGMLGKKS+SEEMM ILCDMK +GC PNRITWNTML+MCGNKG KY
Sbjct: 414 SGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKY 473
Query: 66 VNRVFREMKNCGLEPDRDTFNT 1
V RVF+EMK+CG EPDRDTFNT
Sbjct: 474 VKRVFQEMKSCGFEPDRDTFNT 495
Score = 108 bits (270), Expect = 7e-22
Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 1/198 (0%)
Frame = -2
Query: 591 ASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVS 412
ASK FD I Y +Y +LH Y + G Y A+ I ++M + P VT+N ++
Sbjct: 193 ASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLD 252
Query: 411 AYVKAGFI-EEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCV 235
Y K G + ++D M SKG+ + T +TVI A G+ G D+A F +K G
Sbjct: 253 VYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYA 312
Query: 234 PTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKYVNRV 55
P TYNA+L + GK E +SI+ +M+ N C P+ +T+N ++A G + +
Sbjct: 313 PGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAAL 372
Query: 54 FREMKNCGLEPDRDTFNT 1
M G++P+ T+ T
Sbjct: 373 IDTMTENGIKPNAVTYTT 390
Score = 104 bits (259), Expect = 1e-20
Identities = 55/186 (29%), Positives = 99/186 (53%)
Frame = -2
Query: 600 LEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNE 421
+++A +D++K G P +YNA+L + GK E + IL +M+ + C P+ +T+N
Sbjct: 401 VDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNT 460
Query: 420 LVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELG 241
++S G + V M S G P+ T+ T+I A G+ G + A ++ +M E G
Sbjct: 461 MLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAG 520
Query: 240 CVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKYVN 61
P+V TYNA+L L ++ S++ DMK+ G P+ +++ +L G K +N
Sbjct: 521 FTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGIN 580
Query: 60 RVFREM 43
R+ +++
Sbjct: 581 RIEKDI 586
Score = 84.0 bits (206), Expect = 2e-14
Identities = 55/234 (23%), Positives = 97/234 (41%), Gaps = 35/234 (14%)
Frame = -2
Query: 597 EEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNEL 418
EE K ++K G P +++N +L + G G++ + EM+ PD TFN L
Sbjct: 437 EEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTL 496
Query: 417 VSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELGC 238
++A + G + + D M G TP+ TY +++A + G A S+ MK G
Sbjct: 497 ITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGF 556
Query: 237 VPTVCTYNAILGMLGKKSRSEEMMSILCD------------------------------- 151
P+ +Y+ IL K + + I D
Sbjct: 557 KPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMER 616
Query: 150 ----MKSNGCVPNRITWNTMLAMCGNKGAQKYVNRVFREMKNCGLEPDRDTFNT 1
++ +G P+ + +N+ML+M K + + ++ CGL+PD T+N+
Sbjct: 617 AFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNS 670
Score = 81.3 bits (199), Expect = 1e-13
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
Frame = -2
Query: 525 LLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVKAGFIEEGAAVIDTMTSKG 346
+ + G+ ++ A + D + + D + ++ +Y + G E A+ + M G
Sbjct: 180 MARILGRESQHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESG 239
Query: 345 ITPNAITYTTVIDAYGKAGKE-DKALSLFGQMKELGCVPTVCTYNAILGMLGKKSRSEEM 169
++P +TY ++D YGK G+ +K L L +M+ G T + ++ G++ +E
Sbjct: 240 LSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEA 299
Query: 168 MSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKYVNRVFREMKNCGLEPDRDTFN 4
+KS G P +T+N +L + G G + +EM++ PD T+N
Sbjct: 300 KEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYN 354
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/160 (25%), Positives = 77/160 (48%)
Frame = -2
Query: 579 FDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVK 400
F ++ GY P V +N++L ++ + ++ A I+ ++ PD VT+N L+ Y +
Sbjct: 618 FQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYAR 677
Query: 399 AGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCVPTVCT 220
G + ++ + + G + I+Y TVI + + G +AL +M G P + T
Sbjct: 678 GGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVT 737
Query: 219 YNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTML 100
YN +G K E+ +L M + C PN +T+ ++
Sbjct: 738 YNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVV 777
Score = 74.7 bits (182), Expect = 1e-11
Identities = 44/233 (18%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Frame = -2
Query: 594 EASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELV 415
+A K +DE+ G+ P +YNALL+ + G + A ++ +M+ P +++ ++
Sbjct: 508 DAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLIL 567
Query: 414 SAYVKAGFIE----------EG-------------------------AAVIDTMTSKGIT 340
++Y K G+++ +G + G
Sbjct: 568 NSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYK 627
Query: 339 PNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCVPTVCTYNAILGMLGKKSRSEEMMSI 160
P+ + + +++ + + D+A + ++E G P + TYN+++ + + + I
Sbjct: 628 PDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEI 687
Query: 159 LCDMKSNGCVPNRITWNTMLAMCGNKGAQKYVNRVFREMKNCGLEPDRDTFNT 1
L +++++G + I++NT++ +G R EM + G+ P T+NT
Sbjct: 688 LRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNT 740
Score = 70.1 bits (170), Expect = 3e-10
Identities = 37/149 (24%), Positives = 69/149 (46%)
Frame = -2
Query: 603 MLEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFN 424
M + A + I+ G P V+YN+L+ +Y + G +A IL E++ + D +++N
Sbjct: 645 MHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYN 704
Query: 423 ELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKEL 244
++ + + G + E + M S+GI P +TY T + Y G + + M +
Sbjct: 705 TVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKH 764
Query: 243 GCVPTVCTYNAILGMLGKKSRSEEMMSIL 157
C P TY ++ K + +E M +
Sbjct: 765 DCRPNELTYKIVVDGYCKAKKFKEAMDFV 793
Score = 67.4 bits (163), Expect = 2e-09
Identities = 44/231 (19%), Positives = 97/231 (41%), Gaps = 36/231 (15%)
Frame = -2
Query: 591 ASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDE------------------ 466
A ++K++G+ P SY+ +L+ Y K G Y + ++ +++
Sbjct: 544 AESVIKDMKNKGFKPSETSYSLILNSYAKGG-YVKGINRIEKDIYDGHIFPSWMLLRTLI 602
Query: 465 ------------------MERNKCPPDAVTFNELVSAYVKAGFIEEGAAVIDTMTSKGIT 340
++++ PD V FN ++S + + + ++ + G+
Sbjct: 603 LANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQ 662
Query: 339 PNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCVPTVCTYNAILGMLGKKSRSEEMMSI 160
P+ +TY +++D Y + G+ KA + +++ G + +YN ++ ++ E +
Sbjct: 663 PDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRT 722
Query: 159 LCDMKSNGCVPNRITWNTMLAMCGNKGAQKYVNRVFREMKNCGLEPDRDTF 7
L +M S G P +T+NT + KG ++ V M P+ T+
Sbjct: 723 LSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTY 773
Score = 63.5 bits (153), Expect = 3e-08
Identities = 35/117 (29%), Positives = 55/117 (47%)
Frame = -2
Query: 594 EASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELV 415
+A + E+++ G +SYN ++ + + G+ EAL L EM P VT+N V
Sbjct: 683 KAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFV 742
Query: 414 SAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKEL 244
Y G E V+ MT PN +TY V+D Y KA K +A+ + ++
Sbjct: 743 GGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEAMDFVSTITDI 799
>ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g18940 gi|3004555|gb|AAC09028.1| putative
salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14
[Arabidopsis thaliana] gi|38564280|gb|AAR23719.1|
At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 320 bits (821), Expect = 9e-86
Identities = 149/202 (73%), Positives = 171/202 (84%)
Frame = -2
Query: 606 GMLEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTF 427
G+L EA +FF E+KS GY PGTV+YNALL V+GKAG+YTEAL +L EME N CP D+VT+
Sbjct: 295 GLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTY 354
Query: 426 NELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKE 247
NELV+AYV+AGF +E A VI+ MT KG+ PNAITYTTVIDAYGKAGKED+AL LF MKE
Sbjct: 355 NELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKE 414
Query: 246 LGCVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKY 67
GCVP CTYNA+L +LGKKSRS EM+ +LCDMKSNGC PNR TWNTMLA+CGNKG K+
Sbjct: 415 AGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKF 474
Query: 66 VNRVFREMKNCGLEPDRDTFNT 1
VNRVFREMK+CG EPDRDTFNT
Sbjct: 475 VNRVFREMKSCGFEPDRDTFNT 496
Score = 106 bits (265), Expect = 3e-21
Identities = 62/195 (31%), Positives = 96/195 (49%)
Frame = -2
Query: 606 GMLEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTF 427
G +EA K F +K G VP T +YNA+L + GK E + +L +M+ N C P+ T+
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATW 459
Query: 426 NELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKE 247
N +++ G + V M S G P+ T+ T+I AYG+ G E A ++G+M
Sbjct: 460 NTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR 519
Query: 246 LGCVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKY 67
G V TYNA+L L +K +++ DMKS G P +++ ML G
Sbjct: 520 AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLG 579
Query: 66 VNRVFREMKNCGLEP 22
+ R+ +K + P
Sbjct: 580 IERIENRIKEGQIFP 594
Score = 103 bits (258), Expect = 2e-20
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 1/198 (0%)
Frame = -2
Query: 591 ASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVS 412
A+K D+I Q Y+ +Y +LH Y + G Y +A+ + + M+ P VT+N ++
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 411 AYVKAGFI-EEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCV 235
+ K G + V+D M SKG+ + T +TV+ A + G +A F ++K G
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYE 313
Query: 234 PTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKYVNRV 55
P TYNA+L + GK E +S+L +M+ N C + +T+N ++A G K V
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 54 FREMKNCGLEPDRDTFNT 1
M G+ P+ T+ T
Sbjct: 374 IEMMTKKGVMPNAITYTT 391
Score = 89.0 bits (219), Expect = 6e-16
Identities = 44/167 (26%), Positives = 83/167 (49%)
Frame = -2
Query: 600 LEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNE 421
L + + F K GY P V +N++L ++ + +Y +A IL+ + + PD VT+N
Sbjct: 612 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 420 LVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELG 241
L+ YV+ G + ++ T+ + P+ ++Y TVI + + G +A+ + +M E G
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 240 CVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTML 100
P + TYN + E+ ++ M N C PN +T+ ++
Sbjct: 732 IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVV 778
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/154 (24%), Positives = 75/154 (48%)
Frame = -2
Query: 603 MLEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFN 424
M ++A + I+ G P V+YN+L+ +Y + G +A IL +E+++ PD V++N
Sbjct: 646 MYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYN 705
Query: 423 ELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKEL 244
++ + + G ++E ++ MT +GI P TY T + Y G + + M +
Sbjct: 706 TVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKN 765
Query: 243 GCVPTVCTYNAILGMLGKKSRSEEMMSILCDMKS 142
C P T+ ++ + + E M + +K+
Sbjct: 766 DCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT 799
Score = 71.6 bits (174), Expect = 1e-10
Identities = 41/191 (21%), Positives = 87/191 (45%)
Frame = -2
Query: 573 EIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVKAG 394
++KS+G+ P SY+ +L Y K G Y I + ++ + P + L+ A K
Sbjct: 551 DMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCR 610
Query: 393 FIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCVPTVCTYN 214
+ G P+ + + +++ + + D+A + ++E G P + TYN
Sbjct: 611 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYN 670
Query: 213 AILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKYVNRVFREMKNC 34
+++ M ++ + IL ++ + P+ +++NT++ +G + R+ EM
Sbjct: 671 SLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTER 730
Query: 33 GLEPDRDTFNT 1
G+ P T+NT
Sbjct: 731 GIRPCIFTYNT 741
>ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330024|gb|EFH60443.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 829
Score = 318 bits (815), Expect = 5e-85
Identities = 148/202 (73%), Positives = 169/202 (83%)
Frame = -2
Query: 606 GMLEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTF 427
G+L EA FF E+KS GY PGTV+YNALL V+GKAG+YTEAL +L EME N CP D+VT+
Sbjct: 302 GLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTY 361
Query: 426 NELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKE 247
NELV+AY +AGF +E A VI+ MT KG+ PNAITYTTVIDAYGKAGKED+AL LF MKE
Sbjct: 362 NELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKE 421
Query: 246 LGCVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKY 67
GCVP CTYNA+L MLGKKSRS EM+ +LCDMKSNGC PNR TWNT+LA+CGNKG K+
Sbjct: 422 AGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKF 481
Query: 66 VNRVFREMKNCGLEPDRDTFNT 1
VNRVFREMK+CG EPDRDTFNT
Sbjct: 482 VNRVFREMKSCGFEPDRDTFNT 503
Score = 104 bits (259), Expect = 1e-20
Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 1/198 (0%)
Frame = -2
Query: 591 ASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVS 412
A+K D+I Q Y+ +Y +LH Y + G Y +A+++ + M+ P VT+N ++
Sbjct: 201 AAKLLDKIPLQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILD 260
Query: 411 AYVKAGFI-EEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCV 235
+ K G + V++ M SKG+ + T +TV+ A + G +A F ++K G
Sbjct: 261 VFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYE 320
Query: 234 PTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKYVNRV 55
P TYNA+L + GK E +S+L +M+ N C + +T+N ++A G K V
Sbjct: 321 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVV 380
Query: 54 FREMKNCGLEPDRDTFNT 1
M G+ P+ T+ T
Sbjct: 381 IEMMTQKGVMPNAITYTT 398
Score = 103 bits (258), Expect = 2e-20
Identities = 61/176 (34%), Positives = 91/176 (51%)
Frame = -2
Query: 606 GMLEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTF 427
G +EA K F +K G VP T +YNA+L + GK E + +L +M+ N C P+ T+
Sbjct: 407 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATW 466
Query: 426 NELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKE 247
N +++ G + V M S G P+ T+ T+I AYG+ G E A ++G+M
Sbjct: 467 NTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR 526
Query: 246 LGCVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKG 79
G V TYNA+L L +K +++ DMKS G P +++ ML C KG
Sbjct: 527 AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML-QCYAKG 581
Score = 87.4 bits (215), Expect = 2e-15
Identities = 44/167 (26%), Positives = 82/167 (49%)
Frame = -2
Query: 600 LEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNE 421
L + + F K GY P V +N++L ++ + +Y +A IL + + PD VT+N
Sbjct: 619 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNS 678
Query: 420 LVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELG 241
L+ YV+ G + ++ T+ + P+ ++Y TVI + + G +A+ + +M E G
Sbjct: 679 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERG 738
Query: 240 CVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTML 100
P + TYN + E+ ++ M N C PN +T+ ++
Sbjct: 739 IRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTFKMVV 785
Score = 80.9 bits (198), Expect = 2e-13
Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 38/240 (15%)
Frame = -2
Query: 606 GMLEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTF 427
GM + ++ F E+KS G+ P ++N L+ YG+ G +A + EM R T+
Sbjct: 477 GMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTY 536
Query: 426 NELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGK------------- 286
N L++A + G G VI M SKG P +Y+ ++ Y K G
Sbjct: 537 NALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINE 596
Query: 285 -------------------------EDKALSLFGQMKELGCVPTVCTYNAILGMLGKKSR 181
++A +LF K+ G P + +N++L + + +
Sbjct: 597 GQIFPSWMLLRTLLLANFKCRALAGSERAFTLF---KKHGYKPDMVIFNSMLSIFTRNNM 653
Query: 180 SEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKYVNRVFREMKNCGLEPDRDTFNT 1
++ IL + +G P+ +T+N+++ M +G + + ++ L+PD ++NT
Sbjct: 654 YDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNT 713
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/154 (24%), Positives = 73/154 (47%)
Frame = -2
Query: 603 MLEEASKFFDEIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFN 424
M ++A I G P V+YN+L+ +Y + G +A IL +E+++ PD V++N
Sbjct: 653 MYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYN 712
Query: 423 ELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKEL 244
++ + + G ++E ++ MT +GI P TY T + Y G + + M +
Sbjct: 713 TVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKN 772
Query: 243 GCVPTVCTYNAILGMLGKKSRSEEMMSILCDMKS 142
C P T+ ++ + + E M + +K+
Sbjct: 773 DCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT 806
Score = 70.5 bits (171), Expect = 2e-10
Identities = 42/191 (21%), Positives = 85/191 (44%)
Frame = -2
Query: 573 EIKSQGYVPGTVSYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVKAG 394
++KS+G+ P SY+ +L Y K G Y I + + + P + L+ A K
Sbjct: 558 DMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCR 617
Query: 393 FIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCVPTVCTYN 214
+ G P+ + + +++ + + D+A + + E G P + TYN
Sbjct: 618 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYN 677
Query: 213 AILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQKYVNRVFREMKNC 34
+++ M ++ + IL ++ + P+ +++NT++ KG + R+ EM
Sbjct: 678 SLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTER 737
Query: 33 GLEPDRDTFNT 1
G+ P T+NT
Sbjct: 738 GIRPCIFTYNT 748