BLASTX nr result

ID: Coptis23_contig00025193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025193
         (1033 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273892.2| PREDICTED: uncharacterized protein LOC100257...   229   1e-57
emb|CAN68197.1| hypothetical protein VITISV_039761 [Vitis vinifera]   229   1e-57
ref|XP_002306281.1| predicted protein [Populus trichocarpa] gi|2...   213   5e-53
ref|XP_002873382.1| hypothetical protein ARALYDRAFT_908857 [Arab...   207   3e-51
ref|NP_680159.1| uncharacterized protein [Arabidopsis thaliana] ...   201   3e-49

>ref|XP_002273892.2| PREDICTED: uncharacterized protein LOC100257607 [Vitis vinifera]
          Length = 313

 Score =  229 bits (583), Expect = 1e-57
 Identities = 132/254 (51%), Positives = 156/254 (61%), Gaps = 14/254 (5%)
 Frame = -2

Query: 1023 DAKTKTIPFLIFLPTSEVIKDTYRLCTIARDMGMNLHPNPSLSHIIFXXXXXXXXXXXXX 844
            + K KT P L F+PT EV++DTYRL T+ARDMGM+LHP PSLSHIIF             
Sbjct: 62   NCKPKT-PVLFFIPTKEVVQDTYRLATLARDMGMDLHPTPSLSHIIFSCPSFSSSSSSPS 120

Query: 843  XXXXXXXXXXS------------MSNDFVPLPFPSFANASLTHLSSFVNISRGFFKLVFC 700
                                   + N  VPLPFPS + A LTHL SFV +SRG FK+VF 
Sbjct: 121  PLSSKSLPSSWSWSWSSSSSSWPLPNYAVPLPFPSLSQAPLTHLHSFVTLSRGLFKVVFV 180

Query: 699  KLK--KNESVNENINIWDCSSLSLFSRVSGDRINSMERFSSVLVGRGWTMFKTKNGPSLV 526
              +   NE  +   + WDCSSLSLFSR+SGDRI +ME F   L G GW++FKTK  PSL 
Sbjct: 181  THRGDSNEGNDGRASNWDCSSLSLFSRISGDRIQTMEGFCRALTGVGWSLFKTKKNPSLD 240

Query: 525  TGNFGSTYPVSVYLYRKVDSSRVEIVDLNCNVSSSENGKFRIRELRLPSLDFRNAPLRIL 346
            +G        S YL+RKV+S+RV    L        +G+ R+RELRLP LDFRNAPLRIL
Sbjct: 241  SGGRRIRGCNSAYLFRKVESNRVR-ARLGNGDGGEASGECRVRELRLPPLDFRNAPLRIL 299

Query: 345  QYILLMTDDIFYLA 304
            QYILLMTDDIFYLA
Sbjct: 300  QYILLMTDDIFYLA 313


>emb|CAN68197.1| hypothetical protein VITISV_039761 [Vitis vinifera]
          Length = 313

 Score =  229 bits (583), Expect = 1e-57
 Identities = 133/254 (52%), Positives = 157/254 (61%), Gaps = 14/254 (5%)
 Frame = -2

Query: 1023 DAKTKTIPFLIFLPTSEVIKDTYRLCTIARDMGMNLHPNPSLSHIIFXXXXXXXXXXXXX 844
            + K KT P L F+PT EV++DTYRL T+ARDMGM+LHP PSLSHIIF             
Sbjct: 62   NCKPKT-PVLFFIPTKEVVQDTYRLATLARDMGMDLHPTPSLSHIIFSCPSFSSXSSSPS 120

Query: 843  XXXXXXXXXXS------------MSNDFVPLPFPSFANASLTHLSSFVNISRGFFKLVFC 700
                                   + N  VPLPFPS + A LTHL SFV +SRG FK+VF 
Sbjct: 121  PLSSKSLPSSWSWSWSSSSSSWPLPNYAVPLPFPSLSQAPLTHLHSFVTLSRGLFKVVFV 180

Query: 699  KLK--KNESVNENINIWDCSSLSLFSRVSGDRINSMERFSSVLVGRGWTMFKTKNGPSLV 526
              +   NE  +   + WDCSSLSLFSR+SGDRI +ME F   L G GW++FKTK  PSL 
Sbjct: 181  THRGDSNEGNDGRASNWDCSSLSLFSRISGDRIQTMEGFCRALTGVGWSLFKTKKNPSLD 240

Query: 525  TGNFGSTYPVSVYLYRKVDSSRVEIVDLNCNVSSSENGKFRIRELRLPSLDFRNAPLRIL 346
            +G        S YL+RKV+S+RV    L        +G+ R+RELRLP LDFRNAPLRIL
Sbjct: 241  SGGRRIRGCNSAYLFRKVESNRVR-ARLGNGDGGEASGECRVRELRLPPLDFRNAPLRIL 299

Query: 345  QYILLMTDDIFYLA 304
            QYILLMTDDIFYLA
Sbjct: 300  QYILLMTDDIFYLA 313


>ref|XP_002306281.1| predicted protein [Populus trichocarpa] gi|222855730|gb|EEE93277.1|
            predicted protein [Populus trichocarpa]
          Length = 304

 Score =  213 bits (543), Expect = 5e-53
 Identities = 127/258 (49%), Positives = 153/258 (59%), Gaps = 16/258 (6%)
 Frame = -2

Query: 1029 KLDAKTKTIPFLIFLPTSEVIKDTYRLCTIARDMGMNLHPNPSLSHIIFXXXXXXXXXXX 850
            K   KTKT P L+FLP  E++ DTYRL  IARDMGM+L+P PSLSHIIF           
Sbjct: 57   KTKTKTKT-PLLLFLPNKELVTDTYRLTKIARDMGMDLYPTPSLSHIIFSYPSSCTSPST 115

Query: 849  XXXXXXXXXXXXS---------MSNDFVPLPFPSFANASLTHLSSFVNISRGFFKLVFCK 697
                        S         + N+ +PLPFPS  ++SLTHL SFV++S+G FKL F  
Sbjct: 116  STSTPCTSSVSLSWTSTSSLLHLPNNAIPLPFPSLYSSSLTHLRSFVSLSKGLFKLAFIN 175

Query: 696  LKKNESVNENINI-------WDCSSLSLFSRVSGDRINSMERFSSVLVGRGWTMFKTKNG 538
             K  + V             WDC S SLF R++GDRI+SM++FS  L G GWT+FKTK  
Sbjct: 176  SKHTKKVMGGYESDSLYDSNWDCCSFSLFWRLTGDRIDSMDKFSRALAGVGWTLFKTKEN 235

Query: 537  PSLVTGNFGSTYPVSVYLYRKVDSSRVEIVDLNCNVSSSENGKFRIRELRLPSLDFRNAP 358
             +   G  GS     VYL+RKVDS  V +V      S    G+ RIRELRLP+LDFRN P
Sbjct: 236  NTPSDGIGGSKM---VYLFRKVDSKPVYVV------SRGNGGECRIRELRLPALDFRNTP 286

Query: 357  LRILQYILLMTDDIFYLA 304
            LRIL YILLMTDDIFYL+
Sbjct: 287  LRILHYILLMTDDIFYLS 304


>ref|XP_002873382.1| hypothetical protein ARALYDRAFT_908857 [Arabidopsis lyrata subsp.
            lyrata] gi|297319219|gb|EFH49641.1| hypothetical protein
            ARALYDRAFT_908857 [Arabidopsis lyrata subsp. lyrata]
          Length = 296

 Score =  207 bits (527), Expect = 3e-51
 Identities = 122/258 (47%), Positives = 155/258 (60%), Gaps = 15/258 (5%)
 Frame = -2

Query: 1032 RKLDAKTKTIPFLIFLPTSEVIKDTYRLCTIARDMGMNLHPNPSLSHIIFXXXXXXXXXX 853
            R  + +   IP L F+PT E+I DTYRL TIARD+GM+L+P PSLSHIIF          
Sbjct: 51   RSDNKRNSKIPLLYFVPTRELISDTYRLATIARDLGMDLYPTPSLSHIIFSFPSRESKSP 110

Query: 852  XXXXXXXXXXXXXS-----------MSNDFVPLPFPSFANASLTHLSSFVNISRGFFKLV 706
                         S           + ND V L FPS + +SL+HL SFV++S G FKLV
Sbjct: 111  SPFSSSSHPSTWSSSASLSSSLSWSLPNDAVMLSFPSLSASSLSHLRSFVSLSNGLFKLV 170

Query: 705  FCKLKKNESVNEN---INIWDCSSLSLFSRVSGDRINSMERFSSVLVGRGWTMFKTKNGP 535
            F       S + +   ++ WDC S+SLFSR++  RI SME FS+ L  +GWT++KTK  P
Sbjct: 171  FSATTVETSSSSSPGSVSNWDCCSVSLFSRIANKRIGSMESFSNALASKGWTIYKTKENP 230

Query: 534  SLV-TGNFGSTYPVSVYLYRKVDSSRVEIVDLNCNVSSSENGKFRIRELRLPSLDFRNAP 358
            S   T N GS    SVYL+RKV + R+        ++   NG  R+RELRLP LDFRNAP
Sbjct: 231  SPESTSNGGS----SVYLFRKVYTGRI--------MAREGNGSCRVRELRLPQLDFRNAP 278

Query: 357  LRILQYILLMTDDIFYLA 304
            LRILQY++LMTDDIF+LA
Sbjct: 279  LRILQYLMLMTDDIFFLA 296


>ref|NP_680159.1| uncharacterized protein [Arabidopsis thaliana]
            gi|332003965|gb|AED91348.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 297

 Score =  201 bits (510), Expect = 3e-49
 Identities = 113/246 (45%), Positives = 152/246 (61%), Gaps = 13/246 (5%)
 Frame = -2

Query: 1002 PFLIFLPTSEVIKDTYRLCTIARDMGMNLHPNPSLSHIIFXXXXXXXXXXXXXXXXXXXX 823
            P L F+PT E+I DTYRL TI RD+GM+++P PSLSHIIF                    
Sbjct: 63   PLLYFVPTRELISDTYRLATIGRDLGMDMYPTPSLSHIIFSFPSPESKSPSPFSSSSHPS 122

Query: 822  XXXS-----------MSNDFVPLPFPSFANASLTHLSSFVNISRGFFKLVFCK--LKKNE 682
               S           + ND V L FPS + +SL+HL SFV++S G FKLVF    ++ + 
Sbjct: 123  TWSSSASLSSSLSWSLPNDAVMLSFPSLSASSLSHLRSFVSLSNGLFKLVFSATTVETSP 182

Query: 681  SVNENINIWDCSSLSLFSRVSGDRINSMERFSSVLVGRGWTMFKTKNGPSLVTGNFGSTY 502
            S + +++ WDC S+SLFS+++  RI SME FS+ L  +GWT++KTK  P+  +   G + 
Sbjct: 183  SSSGSVSNWDCCSVSLFSKIANKRIGSMESFSNALASKGWTIYKTKENPTPESTTNGVS- 241

Query: 501  PVSVYLYRKVDSSRVEIVDLNCNVSSSENGKFRIRELRLPSLDFRNAPLRILQYILLMTD 322
              SVYL+RKV + R+        ++   NG  R+RELRLP LDFRNAPLRILQY++LMTD
Sbjct: 242  --SVYLFRKVYTGRI--------MTREGNGSCRVRELRLPQLDFRNAPLRILQYLMLMTD 291

Query: 321  DIFYLA 304
            DIF+LA
Sbjct: 292  DIFFLA 297


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