BLASTX nr result

ID: Coptis23_contig00025173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025173
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helica...   190   9e-47
emb|CBI16803.3| unnamed protein product [Vitis vinifera]              190   9e-47
dbj|BAD35264.1| putative RNA helicase [Oryza sativa Japonica Gro...   185   3e-45
gb|EAZ36111.1| hypothetical protein OsJ_20423 [Oryza sativa Japo...   185   3e-45
gb|EAY99985.1| hypothetical protein OsI_21989 [Oryza sativa Indi...   185   3e-45

>ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helicase DHX33-like [Vitis
           vinifera]
          Length = 713

 Score =  190 bits (483), Expect = 9e-47
 Identities = 93/130 (71%), Positives = 110/130 (84%)
 Frame = -2

Query: 390 FLLGALTDDNKLSCPVGHQMARLPLDPIYAKTLIVASEFGCLEEMLIAVAMLSVDSIFYS 211
           FLLGA+TDD+KLS P+GHQMARLPLDP+Y+K LI+AS+F CLEEMLIAVAMLSV+SIFY+
Sbjct: 475 FLLGAITDDSKLSDPIGHQMARLPLDPVYSKALILASQFNCLEEMLIAVAMLSVESIFYT 534

Query: 210 PRAKFEEARNARKSFSSLEGDHLTLVNVFWSSAEFLEKRKMSGSKDKTAERSLSKWCKDN 31
           PR K EEAR A K FSS EGDH+TL+NV+ +S EF+EK K    K+KT E+ L KWCK+N
Sbjct: 535 PREKLEEARTAMKCFSSPEGDHITLINVYRASDEFVEKIKQGNDKEKT-EKKLRKWCKEN 593

Query: 30  FINGRSLRHA 1
           FIN RSLRHA
Sbjct: 594 FINSRSLRHA 603


>emb|CBI16803.3| unnamed protein product [Vitis vinifera]
          Length = 1408

 Score =  190 bits (483), Expect = 9e-47
 Identities = 93/130 (71%), Positives = 110/130 (84%)
 Frame = -2

Query: 390  FLLGALTDDNKLSCPVGHQMARLPLDPIYAKTLIVASEFGCLEEMLIAVAMLSVDSIFYS 211
            FLLGA+TDD+KLS P+GHQMARLPLDP+Y+K LI+AS+F CLEEMLIAVAMLSV+SIFY+
Sbjct: 1170 FLLGAITDDSKLSDPIGHQMARLPLDPVYSKALILASQFNCLEEMLIAVAMLSVESIFYT 1229

Query: 210  PRAKFEEARNARKSFSSLEGDHLTLVNVFWSSAEFLEKRKMSGSKDKTAERSLSKWCKDN 31
            PR K EEAR A K FSS EGDH+TL+NV+ +S EF+EK K    K+KT E+ L KWCK+N
Sbjct: 1230 PREKLEEARTAMKCFSSPEGDHITLINVYRASDEFVEKIKQGNDKEKT-EKKLRKWCKEN 1288

Query: 30   FINGRSLRHA 1
            FIN RSLRHA
Sbjct: 1289 FINSRSLRHA 1298


>dbj|BAD35264.1| putative RNA helicase [Oryza sativa Japonica Group]
           gi|51091123|dbj|BAD35820.1| putative RNA helicase [Oryza
           sativa Japonica Group]
          Length = 698

 Score =  185 bits (470), Expect = 3e-45
 Identities = 92/129 (71%), Positives = 110/129 (85%)
 Frame = -2

Query: 387 LLGALTDDNKLSCPVGHQMARLPLDPIYAKTLIVASEFGCLEEMLIAVAMLSVDSIFYSP 208
           LLGALTDD KLS PVG QMARLPLDP+Y+K LIVASEF CLEEMLI V+MLSV+SIF+SP
Sbjct: 460 LLGALTDDYKLSDPVGRQMARLPLDPMYSKALIVASEFKCLEEMLIVVSMLSVESIFFSP 519

Query: 207 RAKFEEARNARKSFSSLEGDHLTLVNVFWSSAEFLEKRKMSGSKDKTAERSLSKWCKDNF 28
           R K EEAR ARKSF S EGDH+TLVNV+ ++ E LEK K + +K+KT E++L++WC++NF
Sbjct: 520 REKLEEARAARKSFESSEGDHITLVNVYRAAKECLEKSKNANAKEKTMEKALNRWCRENF 579

Query: 27  INGRSLRHA 1
           IN RSLRHA
Sbjct: 580 INYRSLRHA 588


>gb|EAZ36111.1| hypothetical protein OsJ_20423 [Oryza sativa Japonica Group]
          Length = 330

 Score =  185 bits (470), Expect = 3e-45
 Identities = 92/129 (71%), Positives = 110/129 (85%)
 Frame = -2

Query: 387 LLGALTDDNKLSCPVGHQMARLPLDPIYAKTLIVASEFGCLEEMLIAVAMLSVDSIFYSP 208
           LLGALTDD KLS PVG QMARLPLDP+Y+K LIVASEF CLEEMLI V+MLSV+SIF+SP
Sbjct: 92  LLGALTDDYKLSDPVGRQMARLPLDPMYSKALIVASEFKCLEEMLIVVSMLSVESIFFSP 151

Query: 207 RAKFEEARNARKSFSSLEGDHLTLVNVFWSSAEFLEKRKMSGSKDKTAERSLSKWCKDNF 28
           R K EEAR ARKSF S EGDH+TLVNV+ ++ E LEK K + +K+KT E++L++WC++NF
Sbjct: 152 REKLEEARAARKSFESSEGDHITLVNVYRAAKECLEKSKNANAKEKTMEKALNRWCRENF 211

Query: 27  INGRSLRHA 1
           IN RSLRHA
Sbjct: 212 INYRSLRHA 220


>gb|EAY99985.1| hypothetical protein OsI_21989 [Oryza sativa Indica Group]
          Length = 698

 Score =  185 bits (470), Expect = 3e-45
 Identities = 92/129 (71%), Positives = 110/129 (85%)
 Frame = -2

Query: 387 LLGALTDDNKLSCPVGHQMARLPLDPIYAKTLIVASEFGCLEEMLIAVAMLSVDSIFYSP 208
           LLGALTDD KLS PVG QMARLPLDP+Y+K LIVASEF CLEEMLI V+MLSV+SIF+SP
Sbjct: 460 LLGALTDDYKLSDPVGRQMARLPLDPMYSKALIVASEFKCLEEMLIVVSMLSVESIFFSP 519

Query: 207 RAKFEEARNARKSFSSLEGDHLTLVNVFWSSAEFLEKRKMSGSKDKTAERSLSKWCKDNF 28
           R K EEAR ARKSF S EGDH+TLVNV+ ++ E LEK K + +K+KT E++L++WC++NF
Sbjct: 520 REKLEEARAARKSFESSEGDHITLVNVYRAAKECLEKSKNANAKEKTMEKALNRWCRENF 579

Query: 27  INGRSLRHA 1
           IN RSLRHA
Sbjct: 580 INYRSLRHA 588


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