BLASTX nr result

ID: Coptis23_contig00025164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025164
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent tra...   241   4e-62
emb|CBI16521.3| unnamed protein product [Vitis vinifera]              232   3e-59
ref|XP_004170632.1| PREDICTED: protochlorophyllide-dependent tra...   228   6e-58
ref|XP_004144089.1| PREDICTED: protochlorophyllide-dependent tra...   228   6e-58
ref|XP_003531241.1| PREDICTED: pheophorbide a oxygenase, chlorop...   224   5e-57

>ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent translocon component 52,
           chloroplastic-like [Vitis vinifera]
          Length = 532

 Score =  241 bits (616), Expect = 4e-62
 Identities = 112/178 (62%), Positives = 138/178 (77%), Gaps = 2/178 (1%)
 Frame = +2

Query: 2   CKFIPQAPPDGPQIHTSKKACASAYPSFEQNKILWFWPRSEPQYKDIGAKEKPPCVPELD 181
           CKFIPQAPPDGP +HT KKAC S YPS  QN I+WFWP ++PQYKDI  K KPP +PELD
Sbjct: 157 CKFIPQAPPDGPPVHTFKKACVSVYPSTVQNDIVWFWPNTDPQYKDILMKNKPPYIPELD 216

Query: 182 DPSFTSLLMSRDLPYGYEVLIENLMDPAHVPYAHYGILT-PSRTPSVKADREGGMPLEIN 358
           DPS+T L+ +R++PYGYEVLIENLMDPAHVPYAHYGI+T PS+   VKADREGG PLE+ 
Sbjct: 217 DPSYTRLMGNREIPYGYEVLIENLMDPAHVPYAHYGIMTVPSQKKRVKADREGGRPLEMK 276

Query: 359 ITKLDKDGFLAKQDNGFNKFVAPCLFYYFSSLSSDGEPSKSGSIK-KKTSQKQILLVF 529
           I KLD+ GF+ KQ+ G +KF+ PC+FY  S L  D     + S++ KK  Q+++LL+F
Sbjct: 277 IQKLDRSGFIGKQEGGTSKFIPPCVFYVSSDLFIDKTNGSASSVETKKEVQRRMLLIF 334


>emb|CBI16521.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score =  232 bits (591), Expect = 3e-59
 Identities = 108/177 (61%), Positives = 133/177 (75%), Gaps = 1/177 (0%)
 Frame = +2

Query: 2   CKFIPQAPPDGPQIHTSKKACASAYPSFEQNKILWFWPRSEPQYKDIGAKEKPPCVPELD 181
           CKFIPQAPPDGP +HT KKAC S YPS  QN I+WFWP ++PQYKDI  K KPP +PELD
Sbjct: 35  CKFIPQAPPDGPPVHTFKKACVSVYPSTVQNDIVWFWPNTDPQYKDILMKNKPPYIPELD 94

Query: 182 DPSFTSLLMSRDLPYGYEVLIENLMDPAHVPYAHYGILTPSRTPSVKADREGGMPLEINI 361
           DPS+T L+ +R++PYGYEVLIENLMDPAHVPYAHYGI+T        ADREGG PLE+ I
Sbjct: 95  DPSYTRLMGNREIPYGYEVLIENLMDPAHVPYAHYGIMT--------ADREGGRPLEMKI 146

Query: 362 TKLDKDGFLAKQDNGFNKFVAPCLFYYFSSLSSDGEPSKSGSIK-KKTSQKQILLVF 529
            KLD+ GF+ KQ+ G +KF+ PC+FY  S L  D     + S++ KK  Q+++LL+F
Sbjct: 147 QKLDRSGFIGKQEGGTSKFIPPCVFYVSSDLFIDKTNGSASSVETKKEVQRRMLLIF 203


>ref|XP_004170632.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
           chloroplastic-like [Cucumis sativus]
          Length = 538

 Score =  228 bits (580), Expect = 6e-58
 Identities = 106/187 (56%), Positives = 136/187 (72%), Gaps = 11/187 (5%)
 Frame = +2

Query: 2   CKFIPQAPPDGPQIHTSKKACASAYPSFEQNKILWFWPRSEPQYKDIGAKEKPPCVPELD 181
           CKFIPQAPPDGP +HTSK+AC S YPS  QN ILWFWP S+PQYKDI AK+ PP +PE+D
Sbjct: 154 CKFIPQAPPDGPPVHTSKRACVSVYPSVVQNDILWFWPNSDPQYKDIMAKKTPPYIPEID 213

Query: 182 DPSFTSLLMSRDLPYGYEVLIENLMDPAHVPYAHYGILTPSRTPSVKADREGGMPLEINI 361
           DPS+  L++SRDLPYGYE+L ENLMDPAHVPYAHYG++   +T + KAD EGG P++I +
Sbjct: 214 DPSYAKLIISRDLPYGYEILTENLMDPAHVPYAHYGLIRRQQTKNKKADEEGGQPIDIVV 273

Query: 362 TKLDKDGFLAKQDNGFNKFVAPCLFYYFSSLSS---------DGEPS--KSGSIKKKTSQ 508
             LD  GF++ Q  G  KFVAPC+ Y   +L S         +G PS  ++ ++  KTSQ
Sbjct: 274 RDLDVHGFISNQGLGHGKFVAPCVTYTSLNLPSKERNAKHQDNGTPSLDENNTVAPKTSQ 333

Query: 509 KQILLVF 529
           ++ ++VF
Sbjct: 334 RKTMVVF 340


>ref|XP_004144089.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
           chloroplastic-like [Cucumis sativus]
          Length = 538

 Score =  228 bits (580), Expect = 6e-58
 Identities = 106/187 (56%), Positives = 136/187 (72%), Gaps = 11/187 (5%)
 Frame = +2

Query: 2   CKFIPQAPPDGPQIHTSKKACASAYPSFEQNKILWFWPRSEPQYKDIGAKEKPPCVPELD 181
           CKFIPQAPPDGP +HTSK+AC S YPS  QN ILWFWP S+PQYKDI AK+ PP +PE+D
Sbjct: 154 CKFIPQAPPDGPPVHTSKRACVSVYPSVVQNDILWFWPNSDPQYKDIMAKKTPPYIPEID 213

Query: 182 DPSFTSLLMSRDLPYGYEVLIENLMDPAHVPYAHYGILTPSRTPSVKADREGGMPLEINI 361
           DPS+  L++SRDLPYGYE+L ENLMDPAHVPYAHYG++   +T + KAD EGG P++I +
Sbjct: 214 DPSYAKLIISRDLPYGYEILTENLMDPAHVPYAHYGLIRRQQTKNKKADEEGGQPIDIVV 273

Query: 362 TKLDKDGFLAKQDNGFNKFVAPCLFYYFSSLSS---------DGEPS--KSGSIKKKTSQ 508
             LD  GF++ Q  G  KFVAPC+ Y   +L S         +G PS  ++ ++  KTSQ
Sbjct: 274 RDLDVHGFISNQGLGHGKFVAPCVTYTSLNLPSKERNAKHQDNGTPSLDENNTVAPKTSQ 333

Query: 509 KQILLVF 529
           ++ ++VF
Sbjct: 334 RKTMVVF 340


>ref|XP_003531241.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
           max]
          Length = 531

 Score =  224 bits (572), Expect = 5e-57
 Identities = 104/177 (58%), Positives = 133/177 (75%), Gaps = 1/177 (0%)
 Frame = +2

Query: 2   CKFIPQAPPDGPQIHTSKKACASAYPSFEQNKILWFWPRSEPQYKDIGAKEKPPCVPELD 181
           CK IPQAPPDGP +HTSKKAC +AYPS  QN ILWFWP ++PQYKDI  +++PP +PELD
Sbjct: 162 CKLIPQAPPDGPPVHTSKKACVAAYPSTVQNDILWFWPNTDPQYKDIITRKRPPYIPELD 221

Query: 182 DPSFTSLLMSRDLPYGYEVLIENLMDPAHVPYAHYGIL-TPSRTPSVKADREGGMPLEIN 358
           DPS+T L+ +RD+ YGYEVLIENLMDPAHVPYAHYG++ TP   P VK DREGG PLE++
Sbjct: 222 DPSYTKLMGNRDISYGYEVLIENLMDPAHVPYAHYGLMRTPK--PKVKVDREGGRPLELS 279

Query: 359 ITKLDKDGFLAKQDNGFNKFVAPCLFYYFSSLSSDGEPSKSGSIKKKTSQKQILLVF 529
           I  LD +GF A Q    +KF+ PC+FY +   +   +P+ S   +K ++QK+  L+F
Sbjct: 280 IETLDINGFTANQGWSKSKFMPPCIFYVY---TDSDQPASSAETQKSSAQKKFALIF 333


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