BLASTX nr result
ID: Coptis23_contig00025156
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00025156
(502 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL24106.1| unknown protein [Arabidopsis thaliana] 81 6e-17
ref|NP_565452.1| uncharacterized protein [Arabidopsis thaliana] ... 81 6e-17
ref|XP_002883995.1| hypothetical protein ARALYDRAFT_480532 [Arab... 78 8e-17
ref|NP_194708.1| uncharacterized protein [Arabidopsis thaliana] ... 74 2e-13
ref|XP_002514096.1| hypothetical protein RCOM_1046470 [Ricinus c... 73 3e-13
>gb|AAL24106.1| unknown protein [Arabidopsis thaliana]
Length = 1211
Score = 80.9 bits (198), Expect(2) = 6e-17
Identities = 56/137 (40%), Positives = 75/137 (54%), Gaps = 16/137 (11%)
Frame = -2
Query: 441 QWANQRPQKIPCVSRKSNFVSPVSGQ**CIETPKALDS*CSPASY--------------I 304
QWA+QRPQKI ++R++N V VS Q + D CS + +
Sbjct: 458 QWASQRPQKISRIARRTNLVPIVSSQDEVPYSDNISDVGCSETGFGFHKRSPAASPQLKL 517
Query: 303 KRWPIFSSYVISESEESGDAEIKSEDKVKKSNERGERGEQNVDKVATQVLPSRKN*AP-- 130
K FS+ +SESEESG EIKS+DK K+S+E + QN+ +V+ L SRK+ P
Sbjct: 518 KGESSFSTAALSESEESGHPEIKSKDKGKQSDEVDGKAAQNIPRVSIPALQSRKSNKPAA 577
Query: 129 HEELGHKDGVRRQGH*G 79
EE+G DGVRRQG G
Sbjct: 578 GEEIG--DGVRRQGRTG 592
Score = 31.2 bits (69), Expect(2) = 6e-17
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1
Query: 103 RSETRTLRGFIDMGSGNPTSLEKQDNAGTTKQLR 2
R + RT RGF S NP + K N GT K LR
Sbjct: 586 RRQGRTGRGFSSTRSLNPNGVNKLKNVGTAKHLR 619
>ref|NP_565452.1| uncharacterized protein [Arabidopsis thaliana]
gi|20197016|gb|AAC16469.2| expressed protein
[Arabidopsis thaliana] gi|330251782|gb|AEC06876.1|
uncharacterized protein [Arabidopsis thaliana]
Length = 1211
Score = 80.9 bits (198), Expect(2) = 6e-17
Identities = 56/137 (40%), Positives = 75/137 (54%), Gaps = 16/137 (11%)
Frame = -2
Query: 441 QWANQRPQKIPCVSRKSNFVSPVSGQ**CIETPKALDS*CSPASY--------------I 304
QWA+QRPQKI ++R++N V VS Q + D CS + +
Sbjct: 458 QWASQRPQKISRIARRTNLVPIVSSQDEVPYSDNISDVGCSETGFGFHKRSPAASPQLKL 517
Query: 303 KRWPIFSSYVISESEESGDAEIKSEDKVKKSNERGERGEQNVDKVATQVLPSRKN*AP-- 130
K FS+ +SESEESG EIKS+DK K+S+E + QN+ +V+ L SRK+ P
Sbjct: 518 KGESSFSTAALSESEESGHPEIKSKDKGKQSDEVDGKAAQNIPRVSIPALQSRKSNKPAA 577
Query: 129 HEELGHKDGVRRQGH*G 79
EE+G DGVRRQG G
Sbjct: 578 GEEIG--DGVRRQGRTG 592
Score = 31.2 bits (69), Expect(2) = 6e-17
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1
Query: 103 RSETRTLRGFIDMGSGNPTSLEKQDNAGTTKQLR 2
R + RT RGF S NP + K N GT K LR
Sbjct: 586 RRQGRTGRGFSSTRSLNPNGVNKLKNVGTAKHLR 619
>ref|XP_002883995.1| hypothetical protein ARALYDRAFT_480532 [Arabidopsis lyrata subsp.
lyrata] gi|297329835|gb|EFH60254.1| hypothetical protein
ARALYDRAFT_480532 [Arabidopsis lyrata subsp. lyrata]
Length = 1212
Score = 77.8 bits (190), Expect(2) = 8e-17
Identities = 54/137 (39%), Positives = 74/137 (54%), Gaps = 16/137 (11%)
Frame = -2
Query: 441 QWANQRPQKIPCVSRKSNFVSPVSGQ**CIETPKALDS*CSPASY--------------I 304
QWA+QRPQKI ++R++ V VS + D+ CS + +
Sbjct: 454 QWASQRPQKISRIARRTTLVPIVSSNDEVPYSDNISDAGCSETGFGFHKRSPAASPQLKL 513
Query: 303 KRWPIFSSYVISESEESGDAEIKSEDKVKKSNERGERGEQNVDKVATQVLPSRKN*AP-- 130
K FS+ +SESEESG EIKS+DK K+S+E + QN+ +V+ L SRK+ P
Sbjct: 514 KGESSFSTAALSESEESGPPEIKSKDKGKQSDEVDGKAAQNIPRVSIPALQSRKSNKPAA 573
Query: 129 HEELGHKDGVRRQGH*G 79
EE+G DGVRRQG G
Sbjct: 574 GEEIG--DGVRRQGRTG 588
Score = 33.9 bits (76), Expect(2) = 8e-17
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -1
Query: 103 RSETRTLRGFIDMGSGNPTSLEKQDNAGTTKQLR 2
R + RT RGF S NP ++K N GT KQLR
Sbjct: 582 RRQGRTGRGFSSTRSLNPNGVDKLKNVGTAKQLR 615
>ref|NP_194708.1| uncharacterized protein [Arabidopsis thaliana]
gi|4914403|emb|CAB43654.1| putative protein [Arabidopsis
thaliana] gi|7269878|emb|CAB79737.1| putative protein
[Arabidopsis thaliana] gi|15810173|gb|AAL06988.1|
AT4g29790/F27B13_30 [Arabidopsis thaliana]
gi|27363444|gb|AAO11641.1| At4g29790/F27B13_30
[Arabidopsis thaliana] gi|332660276|gb|AEE85676.1|
uncharacterized protein [Arabidopsis thaliana]
Length = 1211
Score = 73.9 bits (180), Expect(2) = 2e-13
Identities = 58/136 (42%), Positives = 72/136 (52%), Gaps = 15/136 (11%)
Frame = -2
Query: 441 QWANQRPQKIPCVSRKSNFVSPVSGQ**CIETPKALDS*CSPASY--IKRWPI------- 289
QWA+QRPQKI V+R++N V VS + D CS S+ +R P
Sbjct: 457 QWASQRPQKISRVARRTNLVPIVSSNDDIPSSDNMSDVGCSETSFGFYRRSPAASPQMKM 516
Query: 288 -----FSSYVISESEESGDAEIKSEDKVKKSNERGERGEQNVDKVATQVLPSRKN-*APH 127
S+ +S SEE EIKS+DK K+S+E + QNV KV+ L SRKN A
Sbjct: 517 KGENSLSTTALSGSEEFSPPEIKSKDKGKQSDEVNGKTSQNVPKVSIPGLQSRKNKLASG 576
Query: 126 EELGHKDGVRRQGH*G 79
EELG DGVRRQG G
Sbjct: 577 EELG--DGVRRQGRTG 590
Score = 26.2 bits (56), Expect(2) = 2e-13
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1
Query: 103 RSETRTLRGFIDMGSGNPTSLEKQDNAGTTKQLR 2
R + RT RGF S NP + K GT KQLR
Sbjct: 584 RRQGRTGRGFASTRSVNPMGVMKH---GTAKQLR 614
>ref|XP_002514096.1| hypothetical protein RCOM_1046470 [Ricinus communis]
gi|223546552|gb|EEF48050.1| hypothetical protein
RCOM_1046470 [Ricinus communis]
Length = 1291
Score = 73.2 bits (178), Expect(2) = 3e-13
Identities = 60/138 (43%), Positives = 72/138 (52%), Gaps = 16/138 (11%)
Frame = -2
Query: 444 AQWANQRPQKIPCVSRKSNF---------------VSPVSGQ**CIETPKALDS*CSPAS 310
A WA QRPQKI +R++N VS VSG + K L
Sbjct: 466 AHWAGQRPQKISRAARRTNLIPIVPNNDESPALDTVSDVSGSELGLGFAKRLTGNSPQQV 525
Query: 309 YIKRWPIFSSYVISESEESGDAEIKSEDKVKKSNERGERGEQNVDKVATQVLPSRKN-*A 133
+K P SS +SESEESG EIKS+DK K+S+E E+ NV KV+T L SRKN
Sbjct: 526 KLKSEPA-SSAALSESEESGAPEIKSKDKGKRSDEIDEKAGLNVLKVSTLGLQSRKNKLV 584
Query: 132 PHEELGHKDGVRRQGH*G 79
E+LG DGVRRQG G
Sbjct: 585 TGEDLG--DGVRRQGRTG 600
Score = 26.2 bits (56), Expect(2) = 3e-13
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -1
Query: 103 RSETRTLRGFIDMGSGNPTSLEKQDNAGTTKQLR 2
R + RT RG S P S+EK N GT KQLR
Sbjct: 594 RRQGRTGRGSTTR-SLMPMSVEKVGNVGTAKQLR 626