BLASTX nr result

ID: Coptis23_contig00025110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025110
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001050777.2| Os03g0648200 [Oryza sativa Japonica Group] g...   132   1e-28
gb|ABF97896.1| transposon protein, putative, Mutator sub-class [...   132   1e-28
emb|CAH67772.1| H0322F07.9 [Oryza sativa Indica Group] gi|903991...   132   1e-28
gb|AAU89193.1| transposon protein, putative, mutator sub-class [...   132   1e-28
gb|AAT77288.1| putative polyprotein [Oryza sativa Japonica Group]     131   2e-28

>ref|NP_001050777.2| Os03g0648200 [Oryza sativa Japonica Group]
            gi|255674744|dbj|BAF12691.2| Os03g0648200 [Oryza sativa
            Japonica Group]
          Length = 1015

 Score =  132 bits (331), Expect = 1e-28
 Identities = 71/212 (33%), Positives = 117/212 (55%), Gaps = 1/212 (0%)
 Frame = -1

Query: 766  LDGYFLKGKYGRCCLTAIRLDAMNGIFPLGIYICKAENKDTWRQFLCEMKSHLDMHKD-K 590
            LDG  +K KYG   LTA+ +D  + I+P+   + + E+  TW+ FL  +K+ L +     
Sbjct: 499  LDGCHIKTKYGGQLLTAVGMDPNDCIYPIAFAVVEVESLATWKWFLETLKNDLGIENTYP 558

Query: 589  LTSMSDRQKGLLASVAEYFPDSNHRNCFRHMYHNFKKTFRGELWENLA*GAAEAYKVQEF 410
             T M+D+QKGL+ +V + FP+S HR C RH+Y NF+  F+GE+ +N     A +  VQE+
Sbjct: 559  WTIMTDKQKGLIPAVQQVFPESEHRFCVRHLYSNFQLQFKGEVLKNQLWACARSSSVQEW 618

Query: 409  TRILGVINKTDSKALDWLDRKPRSC*ARAHFDWTTKSDQLTNNFSESFNSWILHIRDKPC 230
             + + V+   +  A +WL++ P +   RA F    K D L NN  E FN +IL  R+ P 
Sbjct: 619  NKNMDVMRNLNKSAYEWLEKLPPNTWVRAFFSEFPKCDILLNNNCEVFNKYILEARELPI 678

Query: 229  VHFIDQYNLDLLNLMYT*RELSMDLLEGDVVP 134
            +  +++    L+   +  ++   D  +G + P
Sbjct: 679  LTMLEKIKGQLMTRHFNKQKELADQFQGLICP 710


>gb|ABF97896.1| transposon protein, putative, Mutator sub-class [Oryza sativa
            Japonica Group]
          Length = 983

 Score =  132 bits (331), Expect = 1e-28
 Identities = 71/212 (33%), Positives = 117/212 (55%), Gaps = 1/212 (0%)
 Frame = -1

Query: 766  LDGYFLKGKYGRCCLTAIRLDAMNGIFPLGIYICKAENKDTWRQFLCEMKSHLDMHKD-K 590
            LDG  +K KYG   LTA+ +D  + I+P+   + + E+  TW+ FL  +K+ L +     
Sbjct: 480  LDGCHIKTKYGGQLLTAVGMDPNDCIYPIAFAVVEVESLATWKWFLETLKNDLGIENTYP 539

Query: 589  LTSMSDRQKGLLASVAEYFPDSNHRNCFRHMYHNFKKTFRGELWENLA*GAAEAYKVQEF 410
             T M+D+QKGL+ +V + FP+S HR C RH+Y NF+  F+GE+ +N     A +  VQE+
Sbjct: 540  WTIMTDKQKGLIPAVQQVFPESEHRFCVRHLYSNFQLQFKGEVLKNQLWACARSSSVQEW 599

Query: 409  TRILGVINKTDSKALDWLDRKPRSC*ARAHFDWTTKSDQLTNNFSESFNSWILHIRDKPC 230
             + + V+   +  A +WL++ P +   RA F    K D L NN  E FN +IL  R+ P 
Sbjct: 600  NKNMDVMRNLNKSAYEWLEKLPPNTWVRAFFSEFPKCDILLNNNCEVFNKYILEARELPI 659

Query: 229  VHFIDQYNLDLLNLMYT*RELSMDLLEGDVVP 134
            +  +++    L+   +  ++   D  +G + P
Sbjct: 660  LTMLEKIKGQLMTRHFNKQKELADQFQGLICP 691


>emb|CAH67772.1| H0322F07.9 [Oryza sativa Indica Group] gi|90399190|emb|CAH68177.1|
            H0403D02.5 [Oryza sativa Indica Group]
          Length = 1030

 Score =  132 bits (331), Expect = 1e-28
 Identities = 70/212 (33%), Positives = 118/212 (55%), Gaps = 1/212 (0%)
 Frame = -1

Query: 766  LDGYFLKGKYGRCCLTAIRLDAMNGIFPLGIYICKAENKDTWRQFLCEMKSHLDMHKD-K 590
            LDG  +K KYG   LTA+ +D  + I+P+   + + E+  TW+ FL  +K+ L +     
Sbjct: 514  LDGCHIKTKYGGQLLTAVGMDPNDCIYPIAFAVVEVESLATWKWFLETLKNDLGIENTYP 573

Query: 589  LTSMSDRQKGLLASVAEYFPDSNHRNCFRHMYHNFKKTFRGELWENLA*GAAEAYKVQEF 410
             T M+D+QKGL+ +V + FP+S HR C RH+Y NF+  F+GE+ +N     A +  VQE+
Sbjct: 574  WTIMTDKQKGLIPAVQQVFPESEHRFCVRHLYSNFQLQFKGEVLKNQLWACARSSSVQEW 633

Query: 409  TRILGVINKTDSKALDWLDRKPRSC*ARAHFDWTTKSDQLTNNFSESFNSWILHIRDKPC 230
             + + V+   +  A +W+++ P +   RA F    K D L NN  E FN +IL  R+ P 
Sbjct: 634  NKNMDVMRNLNKSAYEWIEKLPPNTWVRAFFSEFPKCDILLNNNCEVFNKYILEARELPI 693

Query: 229  VHFIDQYNLDLLNLMYT*RELSMDLLEGDVVP 134
            +  +++    L+   +  ++  +D  +G + P
Sbjct: 694  LTMLEKIKGQLMTRHFNKQKELVDQFQGLICP 725


>gb|AAU89193.1| transposon protein, putative, mutator sub-class [Oryza sativa
            Japonica Group]
          Length = 1030

 Score =  132 bits (331), Expect = 1e-28
 Identities = 71/212 (33%), Positives = 117/212 (55%), Gaps = 1/212 (0%)
 Frame = -1

Query: 766  LDGYFLKGKYGRCCLTAIRLDAMNGIFPLGIYICKAENKDTWRQFLCEMKSHLDMHKD-K 590
            LDG  +K KYG   LTA+ +D  + I+P+   + + E+  TW+ FL  +K+ L +     
Sbjct: 514  LDGCHIKTKYGGQLLTAVGMDPNDCIYPIAFAVVEVESLATWKWFLETLKNDLGIENTYP 573

Query: 589  LTSMSDRQKGLLASVAEYFPDSNHRNCFRHMYHNFKKTFRGELWENLA*GAAEAYKVQEF 410
             T M+D+QKGL+ +V + FP+S HR C RH+Y NF+  F+GE+ +N     A +  VQE+
Sbjct: 574  WTIMTDKQKGLIPAVQQVFPESEHRFCVRHLYSNFQLQFKGEVLKNQLWACARSSSVQEW 633

Query: 409  TRILGVINKTDSKALDWLDRKPRSC*ARAHFDWTTKSDQLTNNFSESFNSWILHIRDKPC 230
             + + V+   +  A +WL++ P +   RA F    K D L NN  E FN +IL  R+ P 
Sbjct: 634  NKNMDVMRNLNKSAYEWLEKLPPNTWVRAFFSEFPKCDILLNNNCEVFNKYILEARELPI 693

Query: 229  VHFIDQYNLDLLNLMYT*RELSMDLLEGDVVP 134
            +  +++    L+   +  ++   D  +G + P
Sbjct: 694  LTMLEKIKGQLMTRHFNKQKELADQFQGLICP 725


>gb|AAT77288.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1006

 Score =  131 bits (329), Expect = 2e-28
 Identities = 71/212 (33%), Positives = 117/212 (55%), Gaps = 1/212 (0%)
 Frame = -1

Query: 766  LDGYFLKGKYGRCCLTAIRLDAMNGIFPLGIYICKAENKDTWRQFLCEMKSHLDMHKD-K 590
            LDG  +K KYG   LTA+ +D  + I+P+   + + E+  TW+ FL  +K+ L +     
Sbjct: 490  LDGCHIKTKYGGQLLTAVGMDPNDCIYPIAFAVVEVESLATWKWFLETLKNDLGIENTYP 549

Query: 589  LTSMSDRQKGLLASVAEYFPDSNHRNCFRHMYHNFKKTFRGELWENLA*GAAEAYKVQEF 410
             T M+D+QKGL+ +V + FP+S HR C RH+Y NF+  F+GE+ +N     A +  VQE+
Sbjct: 550  WTIMTDKQKGLIPAVQQVFPESEHRFCVRHLYSNFQLQFKGEVPKNQLWACARSSSVQEW 609

Query: 409  TRILGVINKTDSKALDWLDRKPRSC*ARAHFDWTTKSDQLTNNFSESFNSWILHIRDKPC 230
             + + V+   +  A +WL++ P +   RA F    K D L NN  E FN +IL  R+ P 
Sbjct: 610  NKNMDVMRNLNKSAYEWLEKLPPNTWVRAFFSEFPKCDILLNNNCEVFNKYILEARELPI 669

Query: 229  VHFIDQYNLDLLNLMYT*RELSMDLLEGDVVP 134
            +  +++    L+   +  ++   D  +G + P
Sbjct: 670  LTMLEKIKGQLMTRHFNKQKELADQFQGLICP 701


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