BLASTX nr result

ID: Coptis23_contig00025108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025108
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266382.1| PREDICTED: vesicle transport protein USE1 [V...   149   2e-34
emb|CAN68312.1| hypothetical protein VITISV_028548 [Vitis vinifera]   149   2e-34
ref|XP_002324665.1| Ca2+ antiporter/cation exchanger [Populus tr...   142   3e-32
ref|NP_001148426.1| cation cation antiporter [Zea mays] gi|19561...   142   4e-32
dbj|BAJ85964.1| predicted protein [Hordeum vulgare subsp. vulgare]    141   6e-32

>ref|XP_002266382.1| PREDICTED: vesicle transport protein USE1 [Vitis vinifera]
           gi|297735435|emb|CBI17875.3| unnamed protein product
           [Vitis vinifera]
          Length = 240

 Score =  149 bits (376), Expect = 2e-34
 Identities = 73/90 (81%), Positives = 83/90 (92%)
 Frame = +3

Query: 3   LQEDLTDEMVGLARQLKESSLMMNQSLQDTEKLLDSTEKAVEHSLASTGHANARAMETYS 182
           LQEDLTDEMVGLA+QLK+SSL+M+QS+Q+TEK+LDSTEKAVEHSLASTGH N RAM+ YS
Sbjct: 151 LQEDLTDEMVGLAKQLKQSSLLMSQSIQNTEKILDSTEKAVEHSLASTGHVNTRAMDIYS 210

Query: 183 *SFKTTCFTWLITFFMTCIVIMVVLLIRVT 272
            SFKTTCFTW++ F MTCI IMVVLLIRVT
Sbjct: 211 NSFKTTCFTWIMIFVMTCIFIMVVLLIRVT 240


>emb|CAN68312.1| hypothetical protein VITISV_028548 [Vitis vinifera]
          Length = 240

 Score =  149 bits (376), Expect = 2e-34
 Identities = 73/90 (81%), Positives = 83/90 (92%)
 Frame = +3

Query: 3   LQEDLTDEMVGLARQLKESSLMMNQSLQDTEKLLDSTEKAVEHSLASTGHANARAMETYS 182
           LQEDLTDEMVGLA+QLK+SSL+M+QS+Q+TEK+LDSTEKAVEHSLASTGH N RAM+ YS
Sbjct: 151 LQEDLTDEMVGLAKQLKQSSLLMSQSIQNTEKILDSTEKAVEHSLASTGHVNTRAMDIYS 210

Query: 183 *SFKTTCFTWLITFFMTCIVIMVVLLIRVT 272
            SFKTTCFTW++ F MTCI IMVVLLIRVT
Sbjct: 211 NSFKTTCFTWIMIFVMTCIFIMVVLLIRVT 240


>ref|XP_002324665.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa]
           gi|222866099|gb|EEF03230.1| Ca2+ antiporter/cation
           exchanger [Populus trichocarpa]
          Length = 239

 Score =  142 bits (358), Expect = 3e-32
 Identities = 71/90 (78%), Positives = 81/90 (90%)
 Frame = +3

Query: 3   LQEDLTDEMVGLARQLKESSLMMNQSLQDTEKLLDSTEKAVEHSLASTGHANARAMETYS 182
           LQ+DLTDEMVGLA+QLKESSL+M+QSLQ+TEK+LDSTE+AVE SLASTGHAN R M+ YS
Sbjct: 150 LQDDLTDEMVGLAQQLKESSLLMSQSLQNTEKILDSTEQAVEQSLASTGHANVRTMDIYS 209

Query: 183 *SFKTTCFTWLITFFMTCIVIMVVLLIRVT 272
            + KTTCFTWL+ F MTCI IMVVLLIRVT
Sbjct: 210 KTSKTTCFTWLLMFLMTCIFIMVVLLIRVT 239


>ref|NP_001148426.1| cation cation antiporter [Zea mays] gi|195619202|gb|ACG31431.1|
           cation cation antiporter [Zea mays]
           gi|413938463|gb|AFW73014.1| cation cation antiporter
           [Zea mays]
          Length = 236

 Score =  142 bits (357), Expect = 4e-32
 Identities = 70/90 (77%), Positives = 80/90 (88%)
 Frame = +3

Query: 3   LQEDLTDEMVGLARQLKESSLMMNQSLQDTEKLLDSTEKAVEHSLASTGHANARAMETYS 182
           LQEDLTDEMV LARQLKESSLMMNQS+Q+TEK+LDSTE+AVEHSLASTGHA +RA E YS
Sbjct: 147 LQEDLTDEMVELARQLKESSLMMNQSVQETEKILDSTERAVEHSLASTGHATSRAAEVYS 206

Query: 183 *SFKTTCFTWLITFFMTCIVIMVVLLIRVT 272
            + KTTCF WL+ F MTC+ +MVVLLIR+T
Sbjct: 207 LASKTTCFQWLLMFVMTCMFVMVVLLIRIT 236


>dbj|BAJ85964.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 238

 Score =  141 bits (355), Expect = 6e-32
 Identities = 70/90 (77%), Positives = 79/90 (87%)
 Frame = +3

Query: 3   LQEDLTDEMVGLARQLKESSLMMNQSLQDTEKLLDSTEKAVEHSLASTGHANARAMETYS 182
           LQEDLTDEMV LARQLKESSL+MNQS+QDTEK+LDSTE+AVEHSLASTG A ARA E YS
Sbjct: 149 LQEDLTDEMVDLARQLKESSLLMNQSVQDTEKILDSTERAVEHSLASTGRATARASEVYS 208

Query: 183 *SFKTTCFTWLITFFMTCIVIMVVLLIRVT 272
            + KTTCF WL+ F MTC+ +MVVLLIR+T
Sbjct: 209 VASKTTCFQWLLIFLMTCMFVMVVLLIRIT 238


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