BLASTX nr result

ID: Coptis23_contig00025099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025099
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518500.1| hypothetical protein RCOM_0905090 [Ricinus c...   174   9e-42
ref|XP_003542873.1| PREDICTED: uncharacterized protein LOC100802...   168   4e-40
ref|XP_002266891.1| PREDICTED: uncharacterized protein LOC100252...   168   4e-40
ref|XP_002965893.1| hypothetical protein SELMODRAFT_439335 [Sela...   132   2e-29
ref|NP_177172.6| zinc ion binding protein [Arabidopsis thaliana]...    71   8e-11

>ref|XP_002518500.1| hypothetical protein RCOM_0905090 [Ricinus communis]
           gi|223542345|gb|EEF43887.1| hypothetical protein
           RCOM_0905090 [Ricinus communis]
          Length = 632

 Score =  174 bits (440), Expect = 9e-42
 Identities = 85/119 (71%), Positives = 96/119 (80%)
 Frame = -2

Query: 359 RDGVSSPIILSGWSEYYNLRYLPLTSPVAAILSYPLTVYYVTMALSISSKNLLLSGREVI 180
           RDG+SSPI+LSGWSEYYNLR LPL+SPVA ILS+PLTVYY+   L+ISSKNLLL G+EVI
Sbjct: 412 RDGISSPILLSGWSEYYNLRSLPLSSPVADILSHPLTVYYILTTLNISSKNLLLKGKEVI 471

Query: 179 VHYLGPEGELDWMIAFTEIGHLLNGLGNMQIIMVGPEVPTNLXXXXXXXXXXXXVNLIR 3
           +HYLGPEGELDWM AF EI HLLNG GN+ I+MVGPEVPTNL            VNL+R
Sbjct: 472 LHYLGPEGELDWMPAFAEISHLLNGSGNIHIVMVGPEVPTNLSGTTSGVSSRVRVNLVR 530


>ref|XP_003542873.1| PREDICTED: uncharacterized protein LOC100802088 [Glycine max]
          Length = 631

 Score =  168 bits (426), Expect = 4e-40
 Identities = 81/116 (69%), Positives = 94/116 (81%)
 Frame = -2

Query: 350 VSSPIILSGWSEYYNLRYLPLTSPVAAILSYPLTVYYVTMALSISSKNLLLSGREVIVHY 171
           +SSP +LSGW EYYNLR LPL+SPVA ILS+PLTVY++   L+ISSKNL+L G+EVIVHY
Sbjct: 414 ISSPFLLSGWPEYYNLRSLPLSSPVADILSHPLTVYHILTTLNISSKNLILKGKEVIVHY 473

Query: 170 LGPEGELDWMIAFTEIGHLLNGLGNMQIIMVGPEVPTNLXXXXXXXXXXXXVNLIR 3
           LGPEGELDWM AF E+GHLLNGLGN+QI+MVGPEVPTNL            VNL+R
Sbjct: 474 LGPEGELDWMPAFAEVGHLLNGLGNVQIVMVGPEVPTNLSGTTSGIGSRVRVNLVR 529


>ref|XP_002266891.1| PREDICTED: uncharacterized protein LOC100252085 [Vitis vinifera]
          Length = 633

 Score =  168 bits (426), Expect = 4e-40
 Identities = 83/119 (69%), Positives = 95/119 (79%)
 Frame = -2

Query: 359 RDGVSSPIILSGWSEYYNLRYLPLTSPVAAILSYPLTVYYVTMALSISSKNLLLSGREVI 180
           R+G+SSPI+LS WSEYYNLR L L+SPVA ILS+ LTVYY+   LS SSKNLLL G+EVI
Sbjct: 413 REGMSSPILLSSWSEYYNLRSLSLSSPVADILSHALTVYYILTTLSTSSKNLLLKGKEVI 472

Query: 179 VHYLGPEGELDWMIAFTEIGHLLNGLGNMQIIMVGPEVPTNLXXXXXXXXXXXXVNLIR 3
           +HYLGPEGELDWM AF E+GHLLNGLGN+QI+MVGPEVPTNL            VNL+R
Sbjct: 473 LHYLGPEGELDWMPAFAEVGHLLNGLGNIQIVMVGPEVPTNLSGTTSGISSRVRVNLVR 531


>ref|XP_002965893.1| hypothetical protein SELMODRAFT_439335 [Selaginella moellendorffii]
           gi|300166707|gb|EFJ33313.1| hypothetical protein
           SELMODRAFT_439335 [Selaginella moellendorffii]
          Length = 626

 Score =  132 bits (333), Expect = 2e-29
 Identities = 61/100 (61%), Positives = 80/100 (80%)
 Frame = -2

Query: 353 GVSSPIILSGWSEYYNLRYLPLTSPVAAILSYPLTVYYVTMALSISSKNLLLSGREVIVH 174
           G +  ++LS W++YY+LR LP  SPVAA+LS+PLTVY++  ALS  +KNLL   +EV++H
Sbjct: 408 GSAGMVVLSNWADYYDLRGLPAESPVAALLSHPLTVYHIVTALSPFTKNLLAKNKEVVLH 467

Query: 173 YLGPEGELDWMIAFTEIGHLLNGLGNMQIIMVGPEVPTNL 54
           Y+GPE ELDWM AFTEI HLL+G G++ IIMVGPEVP +L
Sbjct: 468 YIGPEPELDWMPAFTEISHLLSGAGSLHIIMVGPEVPGSL 507


>ref|NP_177172.6| zinc ion binding protein [Arabidopsis thaliana]
           gi|332196904|gb|AEE35025.1| zinc ion binding protein
           [Arabidopsis thaliana]
          Length = 374

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
 Frame = -2

Query: 353 GVSSPII--LSGWSEYYNLRYLPLTSPVAAILSYPLTVYYVTMALSISSKNLLLSGREVI 180
           G  SPI   L  W +Y+  R LPL SPVA +L +PLT+Y+   A+ + +    +S  E+ 
Sbjct: 125 GPLSPITKQLCTWKDYFEWRKLPLDSPVALLLHWPLTIYHAVQAIGMGNLTPQISD-ELR 183

Query: 179 VHYLGPEGELDWMIAFTEIGHLLNGLGNMQIIMVGPEVPTNL 54
           +HYLGP+ EL  +  F E+  L  GL  + + ++GP+VP ++
Sbjct: 184 IHYLGPQKELGQLGVFAELQALFPGL-RIYVDLIGPDVPQHM 224


Top