BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025089
         (1333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]   308   3e-81
ref|XP_002305447.1| chromatin remodeling complex subunit [Populu...   306   1e-80
ref|XP_002273814.1| PREDICTED: DNA repair and recombination prot...   305   2e-80
ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated...   303   7e-80
ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated...   303   7e-80

>emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]
          Length = 1187

 Score =  308 bits (788), Expect = 3e-81
 Identities = 164/304 (53%), Positives = 209/304 (68%), Gaps = 3/304 (0%)
 Frame = +2

Query: 2    ELPGLVDCTVLLNLSPKQRHIIESLKKLEM-FKKTSIGAAVYLHPLLKEFKE--VSEGAG 172
            ELPGLVD TVLLNLS +Q+  + +L K E  FKK S+G+AVYLHP LK F E   +  + 
Sbjct: 853  ELPGLVDFTVLLNLSARQKKEVGNLNKFERKFKKNSVGSAVYLHPQLKYFAEKLAANESK 912

Query: 173  MGDKGCRFNEEKLEKLLSKMDIREGVKAKFFXXXXXXXXXXXXXXXXXXXXXXXXXRILG 352
              +  C   ++K++++L ++D+R+GVKAKFF                          +L 
Sbjct: 913  TDEMTC---QKKMDEILEQLDVRDGVKAKFFL------------------------NVLA 945

Query: 353  LCETSGEKLLVFSQYRLPLKFMERLVVHSKGWRVGKEIFMITGXXXXXXXXXXXXCFNSS 532
            LC++SGEKLLVFSQY LPL+F+E+L +  KGW  GKEIF I+G             FN+S
Sbjct: 946  LCQSSGEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKEIFAISGESSSEQREWSMERFNTS 1005

Query: 533  ADAKVFFGSIKACGEGISLVGASRILIMDVHLNPSVTRQAIGRAFRPGQVRKVFTYRLVA 712
             DA+VFFGSIKACGEGISLVGASR+LI+DVHLNPSVTRQAIGRAFRPGQ +KV  Y+LVA
Sbjct: 1006 PDARVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQKKKVHVYKLVA 1065

Query: 713  SDSPEEENYNTSCRKELVSKMWFEWRELSGSPNFEMEAIDLNQSGDDFWGNHSLREDVKD 892
            +DSPEEE++N+  +KEL+SKMWFEW E  G   FE E +D++ SGD F  +  LRED+K 
Sbjct: 1066 ADSPEEEDHNSCFKKELISKMWFEWNEYCGHHEFEAETVDVSDSGDIFLESPLLREDIKV 1125

Query: 893  VYRR 904
            +YRR
Sbjct: 1126 LYRR 1129


>ref|XP_002305447.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222848411|gb|EEE85958.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 630

 Score =  306 bits (783), Expect = 1e-80
 Identities = 162/302 (53%), Positives = 206/302 (68%), Gaps = 1/302 (0%)
 Frame = +2

Query: 2    ELPGLVDCTVLLNLSPKQRHIIESLKKLEM-FKKTSIGAAVYLHPLLKEFKEVSEGAGMG 178
            ELPGLVD T++LNLS +Q+H ++ LKKL M FK++S+G+AVYLHP L  F          
Sbjct: 363  ELPGLVDFTLMLNLSSRQKHEVKKLKKLAMKFKRSSVGSAVYLHPKLNSFS--------- 413

Query: 179  DKGCRFNEEKLEKLLSKMDIREGVKAKFFXXXXXXXXXXXXXXXXXXXXXXXXXRILGLC 358
             K     ++ ++ LL  +D+R+GVKAKFF                          IL LC
Sbjct: 414  -KNSAITDDMMDDLLETVDVRDGVKAKFFL------------------------NILSLC 448

Query: 359  ETSGEKLLVFSQYRLPLKFMERLVVHSKGWRVGKEIFMITGXXXXXXXXXXXXCFNSSAD 538
            E++GEKLLVFSQY  PLKF+ERLV+  KGW +GKEIF+I+G             FN+S D
Sbjct: 449  ESAGEKLLVFSQYLTPLKFLERLVMKVKGWILGKEIFVISGESSSDHREWSMERFNNSMD 508

Query: 539  AKVFFGSIKACGEGISLVGASRILIMDVHLNPSVTRQAIGRAFRPGQVRKVFTYRLVASD 718
            AKVFFGSIKACGEGISLVGASRI+I+DVHLNPSVT QAIGRAFRPGQ +KV+ YRLVA+D
Sbjct: 509  AKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTCQAIGRAFRPGQTKKVYAYRLVAAD 568

Query: 719  SPEEENYNTSCRKELVSKMWFEWRELSGSPNFEMEAIDLNQSGDDFWGNHSLREDVKDVY 898
            SPEEE++ T  RKE ++KMWFEW E  G  +FE+  ++L+ SGD F  +  +REDV+ +Y
Sbjct: 569  SPEEEDHTTCFRKEAIAKMWFEWNEYCGYQDFEVGTVELDDSGDRFLESLLVREDVRVLY 628

Query: 899  RR 904
            +R
Sbjct: 629  KR 630


>ref|XP_002273814.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 903

 Score =  305 bits (781), Expect = 2e-80
 Identities = 163/304 (53%), Positives = 208/304 (68%), Gaps = 3/304 (0%)
 Frame = +2

Query: 2    ELPGLVDCTVLLNLSPKQRHIIESLKKLEM-FKKTSIGAAVYLHPLLKEFKE--VSEGAG 172
            ELPGLVD TVLLNLS +Q+  + +L K E  FKK S+G+AVYLHP LK F E   +  + 
Sbjct: 627  ELPGLVDFTVLLNLSARQKKEVGNLNKFERKFKKNSVGSAVYLHPQLKYFAEKLAANESK 686

Query: 173  MGDKGCRFNEEKLEKLLSKMDIREGVKAKFFXXXXXXXXXXXXXXXXXXXXXXXXXRILG 352
              +  C   ++K++++L ++D+R+GVKAKFF                          +L 
Sbjct: 687  TDEMTC---QKKMDEILEQLDVRDGVKAKFFL------------------------NVLA 719

Query: 353  LCETSGEKLLVFSQYRLPLKFMERLVVHSKGWRVGKEIFMITGXXXXXXXXXXXXCFNSS 532
            LC++SGEKLLVFSQY LPL+F+E+L +  KGW  GKEIF I+G             FN+S
Sbjct: 720  LCQSSGEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKEIFAISGESSSEQREWSMERFNTS 779

Query: 533  ADAKVFFGSIKACGEGISLVGASRILIMDVHLNPSVTRQAIGRAFRPGQVRKVFTYRLVA 712
             DA+VFFGSIKACGEGISLVGASR+LI+DVHLNPSVTRQAIGRAFRPGQ +KV  Y+LVA
Sbjct: 780  PDARVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQKKKVHVYKLVA 839

Query: 713  SDSPEEENYNTSCRKELVSKMWFEWRELSGSPNFEMEAIDLNQSGDDFWGNHSLREDVKD 892
            +DSPEEE++N+  +KEL+SKMWFEW E  G   FE E +D++ SGD F  +  LRED+  
Sbjct: 840  ADSPEEEDHNSCFKKELISKMWFEWNEYCGHHEFEAETVDVSDSGDLFLESPLLREDITV 899

Query: 893  VYRR 904
            +YRR
Sbjct: 900  LYRR 903


>ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A containing DEAD/H box
            1B-like [Cucumis sativus]
          Length = 903

 Score =  303 bits (776), Expect = 7e-80
 Identities = 165/302 (54%), Positives = 203/302 (67%), Gaps = 1/302 (0%)
 Frame = +2

Query: 2    ELPGLVDCTVLLNLSPKQRHIIESLKKLEM-FKKTSIGAAVYLHPLLKEFKEVSEGAGMG 178
            ELPGLVD TV+LNL+ KQ+H  E +KK    FK +S G+AVYLHP L  F   S  A + 
Sbjct: 636  ELPGLVDFTVVLNLTSKQKHEGEKVKKFNRKFKISSAGSAVYLHPKLNVF---SVNAAVT 692

Query: 179  DKGCRFNEEKLEKLLSKMDIREGVKAKFFXXXXXXXXXXXXXXXXXXXXXXXXXRILGLC 358
            D       +K+++++ KMD+++GVK KFF                          +L LC
Sbjct: 693  D-------DKIDEVIDKMDVKDGVKTKFFL------------------------NLLNLC 721

Query: 359  ETSGEKLLVFSQYRLPLKFMERLVVHSKGWRVGKEIFMITGXXXXXXXXXXXXCFNSSAD 538
             T+GEKLLVFSQY LPLKFMERLVV  KGW  G+E FMI+G             FN+S D
Sbjct: 722  ATTGEKLLVFSQYLLPLKFMERLVVQKKGWSPGRETFMISGETTPEQREWSMERFNNSPD 781

Query: 539  AKVFFGSIKACGEGISLVGASRILIMDVHLNPSVTRQAIGRAFRPGQVRKVFTYRLVASD 718
            A+VFFGSIKACGEGISLVGASRI+I+DVHLNPSVTRQAIGRAFRPGQ +KVF YRLVA D
Sbjct: 782  ARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQTKKVFAYRLVAGD 841

Query: 719  SPEEENYNTSCRKELVSKMWFEWRELSGSPNFEMEAIDLNQSGDDFWGNHSLREDVKDVY 898
            SPEE +++T  +KEL++KMWFEW E  G  +FE+E +D+ Q GD+F     L +DVK +Y
Sbjct: 842  SPEEGDHSTCFKKELIAKMWFEWNEYCGYHDFEVETVDVKQCGDNFLETPLLGQDVKVLY 901

Query: 899  RR 904
            RR
Sbjct: 902  RR 903


>ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A containing DEAD/H box
            1B-like [Cucumis sativus]
          Length = 903

 Score =  303 bits (776), Expect = 7e-80
 Identities = 165/302 (54%), Positives = 203/302 (67%), Gaps = 1/302 (0%)
 Frame = +2

Query: 2    ELPGLVDCTVLLNLSPKQRHIIESLKKLEM-FKKTSIGAAVYLHPLLKEFKEVSEGAGMG 178
            ELPGLVD TV+LNL+ KQ+H  E +KK    FK +S G+AVYLHP L  F   S  A + 
Sbjct: 636  ELPGLVDFTVVLNLTSKQKHEGEKVKKFNRKFKISSAGSAVYLHPKLNVF---SVNAAVT 692

Query: 179  DKGCRFNEEKLEKLLSKMDIREGVKAKFFXXXXXXXXXXXXXXXXXXXXXXXXXRILGLC 358
            D       +K+++++ KMD+++GVK KFF                          +L LC
Sbjct: 693  D-------DKIDEVIDKMDVKDGVKTKFFL------------------------NLLNLC 721

Query: 359  ETSGEKLLVFSQYRLPLKFMERLVVHSKGWRVGKEIFMITGXXXXXXXXXXXXCFNSSAD 538
             T+GEKLLVFSQY LPLKFMERLVV  KGW  G+E FMI+G             FN+S D
Sbjct: 722  ATTGEKLLVFSQYLLPLKFMERLVVQKKGWSPGRETFMISGETTPEQREWSMERFNNSPD 781

Query: 539  AKVFFGSIKACGEGISLVGASRILIMDVHLNPSVTRQAIGRAFRPGQVRKVFTYRLVASD 718
            A+VFFGSIKACGEGISLVGASRI+I+DVHLNPSVTRQAIGRAFRPGQ +KVF YRLVA D
Sbjct: 782  ARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQTKKVFAYRLVAGD 841

Query: 719  SPEEENYNTSCRKELVSKMWFEWRELSGSPNFEMEAIDLNQSGDDFWGNHSLREDVKDVY 898
            SPEE +++T  +KEL++KMWFEW E  G  +FE+E +D+ Q GD+F     L +DVK +Y
Sbjct: 842  SPEEGDHSTCFKKELIAKMWFEWNEYCGYHDFEVETVDVKQCGDNFLETPLLGQDVKVLY 901

Query: 899  RR 904
            RR
Sbjct: 902  RR 903