BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025078
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEE36479.1| TBP-associated factor 13 [Solanum melongena]           188   3e-46
gb|ADU56179.1| transcription initiation factor TFIID subunit [Ja...   188   4e-46
ref|XP_002275358.1| PREDICTED: transcription initiation factor T...   187   8e-46
ref|XP_002515305.1| Transcription initiation factor TFIID subuni...   187   8e-46
gb|AFL48184.1| TBP-associated factor 13 protein [Capsicum annuum]     187   1e-45

>gb|AEE36479.1| TBP-associated factor 13 [Solanum melongena]
          Length = 128

 Score =  188 bits (478), Expect = 3e-46
 Identities = 89/112 (79%), Positives = 105/112 (93%)
 Frame = +2

Query: 50  NSSNTGPTPKQKVGSSQPSDVSLKRKRGVFQKDLQHMMYGYGDDANPLPETVGLVEDIVV 229
           N+++ GP+ K +VG+SQPS+ SLKRKRG+FQKDLQHMMYG+GDD+NPLPETV LVEDIVV
Sbjct: 2   NNTSAGPSSKARVGASQPSESSLKRKRGMFQKDLQHMMYGFGDDSNPLPETVALVEDIVV 61

Query: 230 EYITDMVNKAQDVGSKRGKLLTEDFLYLIRKDMPKLRRCTELLSMHEELKQA 385
           +Y+TDMV+KAQDV SKRGKLLTEDFL+LIRKD+PKL RCTELLSM+EELKQA
Sbjct: 62  DYVTDMVHKAQDVASKRGKLLTEDFLFLIRKDLPKLNRCTELLSMNEELKQA 113


>gb|ADU56179.1| transcription initiation factor TFIID subunit [Jatropha curcas]
          Length = 128

 Score =  188 bits (477), Expect = 4e-46
 Identities = 89/112 (79%), Positives = 100/112 (89%)
 Frame = +2

Query: 50  NSSNTGPTPKQKVGSSQPSDVSLKRKRGVFQKDLQHMMYGYGDDANPLPETVGLVEDIVV 229
           N+ + GP+ K KVG+SQPS+ S KRKRGVFQKDLQHMMYG+GDD NPLPETV LVEDIVV
Sbjct: 2   NNLSAGPSSKSKVGTSQPSETSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVV 61

Query: 230 EYITDMVNKAQDVGSKRGKLLTEDFLYLIRKDMPKLRRCTELLSMHEELKQA 385
           EY+TD+ +KAQD+GSKRGKLL EDFLYLIRKD+PKL RCTELLSM EELKQA
Sbjct: 62  EYVTDLAHKAQDIGSKRGKLLVEDFLYLIRKDLPKLNRCTELLSMQEELKQA 113


>ref|XP_002275358.1| PREDICTED: transcription initiation factor TFIID subunit 13-like
           isoform 3 [Vitis vinifera]
           gi|225437519|ref|XP_002275335.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 2 [Vitis vinifera]
           gi|225437521|ref|XP_002275286.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 1 [Vitis vinifera]
           gi|359480146|ref|XP_003632408.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           [Vitis vinifera]
          Length = 128

 Score =  187 bits (475), Expect = 8e-46
 Identities = 89/112 (79%), Positives = 102/112 (91%)
 Frame = +2

Query: 50  NSSNTGPTPKQKVGSSQPSDVSLKRKRGVFQKDLQHMMYGYGDDANPLPETVGLVEDIVV 229
           NSS+ GP+ K + GSSQPSD S KRKRGVFQKDLQHMMYG+GDDANPLPETV L+EDIVV
Sbjct: 2   NSSSAGPSSKPRAGSSQPSDSSFKRKRGVFQKDLQHMMYGFGDDANPLPETVALLEDIVV 61

Query: 230 EYITDMVNKAQDVGSKRGKLLTEDFLYLIRKDMPKLRRCTELLSMHEELKQA 385
           EY+TD+V+KAQ+  SKRGKLLTEDFL+L+RKD+PKL RCTELLSM+EELKQA
Sbjct: 62  EYVTDLVHKAQETASKRGKLLTEDFLFLMRKDLPKLNRCTELLSMNEELKQA 113


>ref|XP_002515305.1| Transcription initiation factor TFIID subunit, putative [Ricinus
           communis] gi|223545785|gb|EEF47289.1| Transcription
           initiation factor TFIID subunit, putative [Ricinus
           communis]
          Length = 128

 Score =  187 bits (475), Expect = 8e-46
 Identities = 90/112 (80%), Positives = 100/112 (89%)
 Frame = +2

Query: 50  NSSNTGPTPKQKVGSSQPSDVSLKRKRGVFQKDLQHMMYGYGDDANPLPETVGLVEDIVV 229
           +SS TGP+ K KVGSSQPS+ S KRKRGVFQKDLQHMMYG+GDD NPLPE+V LVEDIVV
Sbjct: 2   SSSFTGPSSKSKVGSSQPSETSFKRKRGVFQKDLQHMMYGFGDDPNPLPESVALVEDIVV 61

Query: 230 EYITDMVNKAQDVGSKRGKLLTEDFLYLIRKDMPKLRRCTELLSMHEELKQA 385
           EY+TD+ +KAQD+GSKRGKL  EDFLYLIRKD+PKL RCTELLSM EELKQA
Sbjct: 62  EYVTDLAHKAQDIGSKRGKLSVEDFLYLIRKDLPKLNRCTELLSMQEELKQA 113


>gb|AFL48184.1| TBP-associated factor 13 protein [Capsicum annuum]
          Length = 130

 Score =  187 bits (474), Expect = 1e-45
 Identities = 88/112 (78%), Positives = 104/112 (92%)
 Frame = +2

Query: 50  NSSNTGPTPKQKVGSSQPSDVSLKRKRGVFQKDLQHMMYGYGDDANPLPETVGLVEDIVV 229
           N+S+ GP+ K + G+SQPS+ SLKRKRG+FQKDLQHMMYG+GDD+NPLPETV LVEDIVV
Sbjct: 2   NNSSAGPSSKARAGASQPSESSLKRKRGMFQKDLQHMMYGFGDDSNPLPETVALVEDIVV 61

Query: 230 EYITDMVNKAQDVGSKRGKLLTEDFLYLIRKDMPKLRRCTELLSMHEELKQA 385
           +Y+TDMV+KAQDV +KRGKLLTEDFL+LIRKD+PKL RCTELLSM+EELKQA
Sbjct: 62  DYVTDMVHKAQDVATKRGKLLTEDFLFLIRKDLPKLNRCTELLSMNEELKQA 113