BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025058
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331405.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ...    74   1e-11
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik...    72   4e-11
ref|XP_003532450.1| PREDICTED: tRNA pseudouridine synthase A-lik...    72   4e-11
emb|CBI33811.3| unnamed protein product [Vitis vinifera]               72   4e-11

>ref|XP_002331405.1| predicted protein [Populus trichocarpa] gi|222873619|gb|EEF10750.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/79 (50%), Positives = 48/79 (60%)
 Frame = +1

Query: 19  QGHVLMCVELVGNRFLHRMA*VLVSTSIRXXXXXXXXXXLLKLMDXXXXXXXXXXXXXDG 198
           +G  +MCVEL+ NRFL +M  VLV+TS+R          LLKLMD             DG
Sbjct: 350 KGIRVMCVELIANRFLRKMVRVLVATSVREAAAGAQEDALLKLMDATCRRATAPPAPPDG 409

Query: 199 LCLLDVGYAEFNPENCLIP 255
           LCL+DVGY EF+P NCLIP
Sbjct: 410 LCLVDVGYTEFDPRNCLIP 428


>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 443

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 38/79 (48%), Positives = 46/79 (58%)
 Frame = +1

Query: 19  QGHVLMCVELVGNRFLHRMA*VLVSTSIRXXXXXXXXXXLLKLMDXXXXXXXXXXXXXDG 198
           +G  +MCVELV NRFL +M  VLV+TSIR          LLKLMD             DG
Sbjct: 365 EGRKVMCVELVANRFLRKMVRVLVATSIREAAAGAEDDALLKLMDASCRRASAPPAPPDG 424

Query: 199 LCLLDVGYAEFNPENCLIP 255
           LCL DVGY EF+ + C++P
Sbjct: 425 LCLFDVGYTEFDAQICIVP 443


>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
          Length = 433

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/78 (47%), Positives = 46/78 (58%)
 Frame = +1

Query: 19  QGHVLMCVELVGNRFLHRMA*VLVSTSIRXXXXXXXXXXLLKLMDXXXXXXXXXXXXXDG 198
           +G  +MC+ELV NRFL +M  VLV+TSIR          LLKLMD             DG
Sbjct: 355 EGTKVMCIELVANRFLRKMVRVLVATSIREAAAGAEQDALLKLMDATCRRATAPPAPPDG 414

Query: 199 LCLLDVGYAEFNPENCLI 252
           LCL+DVG+ EF+P+ C I
Sbjct: 415 LCLIDVGFTEFDPQICFI 432


>ref|XP_003532450.1| PREDICTED: tRNA pseudouridine synthase A-like [Glycine max]
          Length = 404

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/74 (50%), Positives = 43/74 (58%)
 Frame = +1

Query: 31  LMCVELVGNRFLHRMA*VLVSTSIRXXXXXXXXXXLLKLMDXXXXXXXXXXXXXDGLCLL 210
           +MCVELV NRFL +M  VLV+TSIR          L+KLMD             DGLCL+
Sbjct: 328 VMCVELVANRFLRKMVRVLVATSIREAAAGAEDDALIKLMDATCRRATAPPAPPDGLCLV 387

Query: 211 DVGYAEFNPENCLI 252
           DVGY EF P+ C I
Sbjct: 388 DVGYTEFEPQKCFI 401


>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/78 (47%), Positives = 46/78 (58%)
 Frame = +1

Query: 19  QGHVLMCVELVGNRFLHRMA*VLVSTSIRXXXXXXXXXXLLKLMDXXXXXXXXXXXXXDG 198
           +G  +MC+ELV NRFL +M  VLV+TSIR          LLKLMD             DG
Sbjct: 324 EGTKVMCIELVANRFLRKMVRVLVATSIREAAAGAEQDALLKLMDATCRRATAPPAPPDG 383

Query: 199 LCLLDVGYAEFNPENCLI 252
           LCL+DVG+ EF+P+ C I
Sbjct: 384 LCLIDVGFTEFDPQICFI 401