BLASTX nr result

ID: Coptis23_contig00025051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025051
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002336811.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002335943.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10

>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
 Frame = -1

Query: 375 FTWSNNSDGGSRIMSKIDRCLVNDKWLVAFGFAEAEFLPHDISDHSPVLITWV-DYKKRA 199
           +TWSN     + IM K+DR LVN+KW + F  +EA FLP  +SDHSP+++  + + + + 
Sbjct: 561 YTWSNQCPE-NLIMRKLDRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVKVIGNDQNKK 619

Query: 198 SPFRFYNNWVYHCEFQDLLGK 136
            PFRF++ W+ H EF  L+ K
Sbjct: 620 KPFRFFDMWMDHDEFMPLVKK 640


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
 Frame = -1

Query: 375 FTWSNNSDGGSRIMSKIDRCLVNDKWLVAFGFAEAEFLPHDISDHSPVLITWVDYKKR-A 199
           +TWSN     + IM K+DR LVN+KW + F  +EA FLP  +SDHSP+++  +   +   
Sbjct: 708 YTWSNQCPE-NLIMQKLDRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVKVIGNDQNIK 766

Query: 198 SPFRFYNNWVYHCEFQDLLGKPEVRKCIQTLC 103
            PFRF++ W+ H EF  L+ K  +   I +LC
Sbjct: 767 KPFRFFDMWMDHDEFMPLV-KKYLYATIMSLC 797


>ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|222874137|gb|EEF11268.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = -1

Query: 375 FTWSNNSDGGSRIMSKIDRCLVNDKWLVAFGFAEAEFLPHDISDHSPVLITWVDYKKR-A 199
           +TWSN     + IM K+DR LVN+KW + F  +E  FLP  +SDHSP+++  +   +   
Sbjct: 465 YTWSNQCPE-NLIMRKLDRVLVNEKWNLNFPLSETRFLPSGMSDHSPMVVKVIGNDQNIK 523

Query: 198 SPFRFYNNWVYHCEFQDLLGKP 133
            PFRF++ W+ H EF  L+ KP
Sbjct: 524 KPFRFFDMWMDHDEFMPLVKKP 545


>ref|XP_002336811.1| predicted protein [Populus trichocarpa] gi|222836943|gb|EEE75336.1|
           predicted protein [Populus trichocarpa]
          Length = 598

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = -1

Query: 375 FTWSNNSDGGSRIMSKIDRCLVNDKWLVAFGFAEAEFLPHDISDHSPVLITWVDYKKR-A 199
           +TWSN     + IM K+DR LVN+KW + F  +EA FLP  +SDHSP+++  +   +   
Sbjct: 519 YTWSNQCPE-NLIMRKLDRVLVNEKWNLKFPLSEARFLPSGMSDHSPIVVKVIGNDQNIK 577

Query: 198 SPFRFYNNWVYHCEFQDLLGK 136
            PFRF++ W+ H EF  L+ K
Sbjct: 578 KPFRFFDMWMDHDEFMPLVKK 598


>ref|XP_002335943.1| predicted protein [Populus trichocarpa] gi|222836494|gb|EEE74901.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = -1

Query: 375 FTWSNNSDGGSRIMSKIDRCLVNDKWLVAFGFAEAEFLPHDISDHSPVLITWVDYKKR-A 199
           +TWSN     + IM K+DR LVN+KW + F  +EA FLP  +SDHSP+++  +   +   
Sbjct: 242 YTWSNQCPE-NLIMRKLDRVLVNEKWNLNFPLSEARFLPSGMSDHSPMVVKVIGNDQNIK 300

Query: 198 SPFRFYNNWVYHCEFQDLLGK 136
            PFRF++ W+ H EF  L+ K
Sbjct: 301 KPFRFFDMWIDHDEFMPLVKK 321


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