BLASTX nr result
ID: Coptis23_contig00025023
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00025023
(815 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 62 3e-13
dbj|BAA78427.1| polyprotein [Arabidopsis thaliana] 59 6e-13
dbj|BAM44531.1| polyprotein [Arabidopsis thaliana] 59 6e-13
dbj|BAM44530.1| polyprotein [Arabidopsis thaliana] 59 7e-13
dbj|BAM44529.1| polyprotein [Arabidopsis thaliana] 59 7e-13
>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
Length = 1171
Score = 61.6 bits (148), Expect(4) = 3e-13
Identities = 32/85 (37%), Positives = 43/85 (50%)
Frame = -1
Query: 635 FCNGCALGKFTCLPLTHDADCLTATFHDIQSDVWISPVKSVYGYRYYVLYTDDLVRNSWI 456
FC+ C LGK LP + + I SDVW+SPV+S G YYVL+ DD R SW+
Sbjct: 492 FCSACQLGKAKQLPFPESSRQSSVPLALIHSDVWVSPVQSTGGCSYYVLFIDDYSRYSWL 551
Query: 455 HLYAL*SEVITHFCTFIAFVKKFLT 381
+ S+V F F +K +
Sbjct: 552 YPLHRKSDVFATFVKFKTIAEKLFS 576
Score = 28.9 bits (63), Expect(4) = 3e-13
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 294 QQNGLAECNHLHIADMAHTLLTTS 223
QQNG+ E H HI +M TLL S
Sbjct: 615 QQNGIVERKHRHIQEMGLTLLAQS 638
Score = 27.7 bits (60), Expect(4) = 3e-13
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 163 LLSNGHPHFPSSGAGPPHTMILCTFGCACYCPLGEYIGHRI 41
+L N P+F P + M L FGCACY L Y H++
Sbjct: 663 VLDNLTPYFLLHKTEPTY-MDLRVFGCACYPLLRPYNDHKL 702
Score = 21.6 bits (44), Expect(4) = 3e-13
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -3
Query: 699 HNRLGHPSA 673
H+RLGHPS+
Sbjct: 461 HSRLGHPSS 469
>dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 58.9 bits (141), Expect(3) = 6e-13
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Frame = -1
Query: 812 LQTGTPLFCGSCRDSLY---LIHLHGPPTYPINIT*ILHCDT-TALG--TLLLRNYLGSN 651
L TG PL G +D LY + + + HC + LG +L + N + SN
Sbjct: 424 LNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHCSWHSRLGHPSLAILNSVISN 483
Query: 650 ----MLSPTF----CNGCALGKFTCLPLTHDADCLTATFHDIQSDVWISPVKSVYGYRYY 495
+L+P+ C+ C + K +P ++ + I SDVW SP+ S+ YRYY
Sbjct: 484 HSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPILSIDNYRYY 543
Query: 494 VLYTDDLVRNSWIHLYAL*SEVITHFCTFIAFVK-KFLTNL 375
V++ D R +W++ S+V F F + V+ +F T +
Sbjct: 544 VIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRI 584
Score = 30.8 bits (68), Expect(3) = 6e-13
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -2
Query: 211 YFTAEAAYTLSTAFLPLLSNGHPHFPSSGAGPPHTMILCTFGCACYCPLGEYIGHRI 41
Y + A Y ++ PLL P F PP+ L FGCACY L Y H++
Sbjct: 650 YAFSVAVYLINRLPTPLLQLQSP-FQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKL 705
Score = 30.0 bits (66), Expect(3) = 6e-13
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 294 QQNGLAECNHLHIADMAHTLLTTSHAPLTLQL 199
+ NGL+E H HI +M TLL+ + P T L
Sbjct: 618 EHNGLSERKHRHIVEMGLTLLSHASVPKTYWL 649
>dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 58.9 bits (141), Expect(3) = 6e-13
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Frame = -1
Query: 812 LQTGTPLFCGSCRDSLY---LIHLHGPPTYPINIT*ILHCDT-TALG--TLLLRNYLGSN 651
L TG PL G +D LY + + + HC + LG +L + N + SN
Sbjct: 424 LNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHCSWHSRLGHPSLAILNSVISN 483
Query: 650 ----MLSPTF----CNGCALGKFTCLPLTHDADCLTATFHDIQSDVWISPVKSVYGYRYY 495
+L+P+ C+ C + K +P ++ + I SDVW SP+ S+ YRYY
Sbjct: 484 HSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPILSIDNYRYY 543
Query: 494 VLYTDDLVRNSWIHLYAL*SEVITHFCTFIAFVK-KFLTNL 375
V++ D R +W++ S+V F F + V+ +F T +
Sbjct: 544 VIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRI 584
Score = 30.8 bits (68), Expect(3) = 6e-13
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -2
Query: 211 YFTAEAAYTLSTAFLPLLSNGHPHFPSSGAGPPHTMILCTFGCACYCPLGEYIGHRI 41
Y + A Y ++ PLL P F PP+ L FGCACY L Y H++
Sbjct: 650 YAFSVAVYLINRLPTPLLQLQSP-FQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKL 705
Score = 30.0 bits (66), Expect(3) = 6e-13
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 294 QQNGLAECNHLHIADMAHTLLTTSHAPLTLQL 199
+ NGL+E H HI +M TLL+ + P T L
Sbjct: 618 EHNGLSERKHRHIVEMGLTLLSHASVPKTYWL 649
>dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 58.9 bits (141), Expect(3) = 7e-13
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Frame = -1
Query: 812 LQTGTPLFCGSCRDSLY---LIHLHGPPTYPINIT*ILHCDT-TALG--TLLLRNYLGSN 651
L TG PL G +D LY + + + HC + LG +L + N + SN
Sbjct: 424 LNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHCSWHSRLGHPSLAILNSVISN 483
Query: 650 ----MLSPTF----CNGCALGKFTCLPLTHDADCLTATFHDIQSDVWISPVKSVYGYRYY 495
+L+P+ C+ C + K +P ++ + I SDVW SP+ S+ YRYY
Sbjct: 484 HSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPILSIDNYRYY 543
Query: 494 VLYTDDLVRNSWIHLYAL*SEVITHFCTFIAFVK-KFLTNL 375
V++ D R +W++ S+V F F + V+ +F T +
Sbjct: 544 VIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRI 584
Score = 30.8 bits (68), Expect(3) = 7e-13
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -2
Query: 211 YFTAEAAYTLSTAFLPLLSNGHPHFPSSGAGPPHTMILCTFGCACYCPLGEYIGHRI 41
Y + A Y ++ PLL P F PP+ L FGCACY L Y H++
Sbjct: 650 YAFSVAVYLINRLPTPLLQLQSP-FQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKL 705
Score = 29.6 bits (65), Expect(3) = 7e-13
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 294 QQNGLAECNHLHIADMAHTLLTTSHAPLT 208
+ NGL+E H HI +M TLL+ + P T
Sbjct: 618 EHNGLSERKHRHIVEMGLTLLSHASVPKT 646
>dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 58.9 bits (141), Expect(3) = 7e-13
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Frame = -1
Query: 812 LQTGTPLFCGSCRDSLY---LIHLHGPPTYPINIT*ILHCDT-TALG--TLLLRNYLGSN 651
L TG PL G +D LY + + + HC + LG +L + N + SN
Sbjct: 424 LNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHCSWHSRLGHPSLAILNSVISN 483
Query: 650 ----MLSPTF----CNGCALGKFTCLPLTHDADCLTATFHDIQSDVWISPVKSVYGYRYY 495
+L+P+ C+ C + K +P ++ + I SDVW SP+ S+ YRYY
Sbjct: 484 HSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPILSIDNYRYY 543
Query: 494 VLYTDDLVRNSWIHLYAL*SEVITHFCTFIAFVK-KFLTNL 375
V++ D R +W++ S+V F F + V+ +F T +
Sbjct: 544 VIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRI 584
Score = 30.8 bits (68), Expect(3) = 7e-13
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -2
Query: 211 YFTAEAAYTLSTAFLPLLSNGHPHFPSSGAGPPHTMILCTFGCACYCPLGEYIGHRI 41
Y + A Y ++ PLL P F PP+ L FGCACY L Y H++
Sbjct: 650 YAFSVAVYLINRLPTPLLQLQSP-FQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKL 705
Score = 29.6 bits (65), Expect(3) = 7e-13
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 294 QQNGLAECNHLHIADMAHTLLTTSHAPLT 208
+ NGL+E H HI +M TLL+ + P T
Sbjct: 618 EHNGLSERKHRHIVEMGLTLLSHASVPKT 646