BLASTX nr result

ID: Coptis23_contig00024970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024970
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305504.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
emb|CAN71285.1| hypothetical protein VITISV_007002 [Vitis vinifera]    62   4e-08
tpg|DAA39253.1| TPA: hypothetical protein ZEAMMB73_547579 [Zea m...    62   5e-08
emb|CAN62201.1| hypothetical protein VITISV_004238 [Vitis vinifera]    62   5e-08
emb|CBI37967.3| unnamed protein product [Vitis vinifera]               62   6e-08

>ref|XP_002305504.1| predicted protein [Populus trichocarpa] gi|222848468|gb|EEE86015.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/125 (27%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
 Frame = -1

Query: 365 TKPPVARQKQVRWYPLMDEILIEVLLEKTLNGLGKKSGNGWKPKTLKEVVEAVNQRLNMS 186
           T+  +  + +  W P  D  L+E+ +++  +  G+ + N +K + ++ V    N+R +M+
Sbjct: 4   TQDVILGRPKAEWTPTRDAYLVELFIDQ--HNCGRTAYNEFKNEMIRSVTRDFNKRFSMN 61

Query: 185 IGSENVRSRLKTMKKDYLTAMTVVEASGFGFSYNQQTKGIDADHVAWEEY----CKQGPY 18
           +    V++R   MKKDY    T++  SGFG+  ++Q   + AD   W+ Y    C+  P+
Sbjct: 62  LEESQVKNRYNVMKKDYGVVKTLLTHSGFGWDESRQM--VVADDKVWDSYIAVKCEARPF 119

Query: 17  ERRCF 3
            R+ F
Sbjct: 120 RRKSF 124


>emb|CAN71285.1| hypothetical protein VITISV_007002 [Vitis vinifera]
          Length = 641

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/111 (28%), Positives = 59/111 (53%)
 Frame = -1

Query: 353 VARQKQVRWYPLMDEILIEVLLEKTLNGLGKKSGNGWKPKTLKEVVEAVNQRLNMSIGSE 174
           V+ ++ + W   MD  L++ L+E+   G  +K G  +       V   + +   +S  SE
Sbjct: 345 VSEKRNLTWIDEMDNFLVDRLMEQMHKG--QKIGEVFTKTAYAMVAREIGENFELSCNSE 402

Query: 173 NVRSRLKTMKKDYLTAMTVVEASGFGFSYNQQTKGIDADHVAWEEYCKQGP 21
           ++++R+KT KK++  A  V++ +G GF +N+ T+ I+A    W  Y K  P
Sbjct: 403 HIKNRMKTFKKNFYAAQEVLQ-NGSGFGFNESTQMIEATTEVWTTYTKAHP 452


>tpg|DAA39253.1| TPA: hypothetical protein ZEAMMB73_547579 [Zea mays]
          Length = 261

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/103 (32%), Positives = 56/103 (54%)
 Frame = -1

Query: 335 VRWYPLMDEILIEVLLEKTLNGLGKKSGNGWKPKTLKEVVEAVNQRLNMSIGSENVRSRL 156
           V W   MD++L++  ++      G +  NGWK      VV+ V ++ N++I  EN+ SR 
Sbjct: 12  VPWNDEMDKVLLDTFVD--YYNKGDRCQNGWKSHVYTAVVKNVCEKCNVTITKENISSRS 69

Query: 155 KTMKKDYLTAMTVVEASGFGFSYNQQTKGIDADHVAWEEYCKQ 27
           KT  K Y     ++  SGFG+ + +    +D+D V W+EY ++
Sbjct: 70  KTFDKHYNIINGLLSTSGFGWDWEKNKLKVDSDTV-WDEYIER 111


>emb|CAN62201.1| hypothetical protein VITISV_004238 [Vitis vinifera]
          Length = 696

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/111 (28%), Positives = 59/111 (53%)
 Frame = -1

Query: 353 VARQKQVRWYPLMDEILIEVLLEKTLNGLGKKSGNGWKPKTLKEVVEAVNQRLNMSIGSE 174
           V+ ++ + W   MD  L++ L+E+   G  +K G  +       V   + +   +S  SE
Sbjct: 406 VSEKRNLTWIDEMDNFLVDRLMEQMHKG--QKIGGVFTKTAYAIVAREIGENFELSCNSE 463

Query: 173 NVRSRLKTMKKDYLTAMTVVEASGFGFSYNQQTKGIDADHVAWEEYCKQGP 21
           ++++R+K +KK++  A  V++ SG GF +N+ T+ I+A    W  Y K  P
Sbjct: 464 HIKNRMKALKKNFYVAQEVLQ-SGSGFGFNESTQMIEATTEVWTTYTKAHP 513


>emb|CBI37967.3| unnamed protein product [Vitis vinifera]
          Length = 2102

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/108 (28%), Positives = 59/108 (54%)
 Frame = -1

Query: 353  VARQKQVRWYPLMDEILIEVLLEKTLNGLGKKSGNGWKPKTLKEVVEAVNQRLNMSIGSE 174
            V+ ++ + W   MD  L++ L+E+   G  +K G  +       V   + +   +S  SE
Sbjct: 1979 VSEKRNLTWIDEMDNFLVDRLMEQMHKG--QKIGGVFTKTAYAMVAREIGENFELSCNSE 2036

Query: 173  NVRSRLKTMKKDYLTAMTVVEASGFGFSYNQQTKGIDADHVAWEEYCK 30
            ++++R+KT+KK++  A  V++ +G GF +N+ T+ I+A    W  Y K
Sbjct: 2037 HIKNRMKTLKKNFYAAQEVLQ-NGSGFGFNESTQMIEATTEVWTTYTK 2083


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