BLASTX nr result
ID: Coptis23_contig00024968
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00024968 (289 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003618898.1| GPI-anchored protein [Medicago truncatula] g... 63 2e-08 ref|XP_002330629.1| predicted protein [Populus trichocarpa] gi|2... 63 2e-08 ref|XP_002325596.1| predicted protein [Populus trichocarpa] gi|2... 62 5e-08 gb|AFK37390.1| unknown [Lotus japonicus] 61 1e-07 ref|XP_003598311.1| GPI-anchored protein LORELEI [Medicago trunc... 61 1e-07 >ref|XP_003618898.1| GPI-anchored protein [Medicago truncatula] gi|355493913|gb|AES75116.1| GPI-anchored protein [Medicago truncatula] Length = 156 Score = 63.2 bits (152), Expect = 2e-08 Identities = 32/62 (51%), Positives = 44/62 (70%) Frame = +2 Query: 2 SYINLYGRYPPGLFASQCREGKNGLDCAEFDNLKLEKNTGYTVRSLSSYLVAAICFVLLI 181 SYINLYG+YPPGLFA+QC+EGK GLDC +N+K+ T + SS VAA ++L++ Sbjct: 91 SYINLYGKYPPGLFANQCKEGKEGLDC---ENVKITNTTNPS----SSVHVAAPHYMLIV 143 Query: 182 QM 187 + Sbjct: 144 SI 145 >ref|XP_002330629.1| predicted protein [Populus trichocarpa] gi|222872233|gb|EEF09364.1| predicted protein [Populus trichocarpa] Length = 164 Score = 63.2 bits (152), Expect = 2e-08 Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Frame = +2 Query: 2 SYINLYGRYPPGLFASQCREGKNGLDCAEFDNLKLEKNTGYTVRSL-SSYLVAAICFVLL 178 S+INLYG+YPPGLFA++CRE KNGLDC + K K+ G + + SS L+ ++L Sbjct: 103 SFINLYGKYPPGLFANECREDKNGLDCQNVEQSK--KSGGVQIAATQSSLLMLTAGLIVL 160 Query: 179 IQMF 190 +Q+F Sbjct: 161 LQLF 164 >ref|XP_002325596.1| predicted protein [Populus trichocarpa] gi|222862471|gb|EEE99977.1| predicted protein [Populus trichocarpa] Length = 123 Score = 62.0 bits (149), Expect = 5e-08 Identities = 29/60 (48%), Positives = 39/60 (65%) Frame = +2 Query: 2 SYINLYGRYPPGLFASQCREGKNGLDCAEFDNLKLEKNTGYTVRSLSSYLVAAICFVLLI 181 SYINLYG+YPPGLFA++CRE KNGLDC D K K G + + S L+ ++++ Sbjct: 66 SYINLYGKYPPGLFANECREDKNGLDCQNVDQSK--KGGGVQIAATQSSLLTLTAGLIVL 123 >gb|AFK37390.1| unknown [Lotus japonicus] Length = 171 Score = 60.8 bits (146), Expect = 1e-07 Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Frame = +2 Query: 2 SYINLYGRYPPGLFASQCREGKNGLDCAEFDNLKLEKNT-GYTVRSLSSYLVAAICFVLL 178 SYINLYG+YPPGLFA +CREGK GL C L +T V S LV CF++L Sbjct: 110 SYINLYGKYPPGLFAHECREGKEGLACPALPPSALADDTSSQVVHFPSLVLVLTACFLIL 169 Query: 179 I 181 + Sbjct: 170 L 170 >ref|XP_003598311.1| GPI-anchored protein LORELEI [Medicago truncatula] gi|355487359|gb|AES68562.1| GPI-anchored protein LORELEI [Medicago truncatula] gi|388514375|gb|AFK45249.1| unknown [Medicago truncatula] Length = 170 Score = 60.8 bits (146), Expect = 1e-07 Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 1/61 (1%) Frame = +2 Query: 2 SYINLYGRYPPGLFASQCREGKNGLDC-AEFDNLKLEKNTGYTVRSLSSYLVAAICFVLL 178 SYINLYGRYPPGLFAS+CREGK GL C A ++ + V + S LV C L+ Sbjct: 108 SYINLYGRYPPGLFASECREGKEGLACDALPPSVSADDTANQIVHTPSLVLVLTACIFLI 167 Query: 179 I 181 + Sbjct: 168 L 168