BLASTX nr result

ID: Coptis23_contig00024968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024968
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618898.1| GPI-anchored protein [Medicago truncatula] g...    63   2e-08
ref|XP_002330629.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002325596.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
gb|AFK37390.1| unknown [Lotus japonicus]                               61   1e-07
ref|XP_003598311.1| GPI-anchored protein LORELEI [Medicago trunc...    61   1e-07

>ref|XP_003618898.1| GPI-anchored protein [Medicago truncatula]
           gi|355493913|gb|AES75116.1| GPI-anchored protein
           [Medicago truncatula]
          Length = 156

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/62 (51%), Positives = 44/62 (70%)
 Frame = +2

Query: 2   SYINLYGRYPPGLFASQCREGKNGLDCAEFDNLKLEKNTGYTVRSLSSYLVAAICFVLLI 181
           SYINLYG+YPPGLFA+QC+EGK GLDC   +N+K+   T  +    SS  VAA  ++L++
Sbjct: 91  SYINLYGKYPPGLFANQCKEGKEGLDC---ENVKITNTTNPS----SSVHVAAPHYMLIV 143

Query: 182 QM 187
            +
Sbjct: 144 SI 145


>ref|XP_002330629.1| predicted protein [Populus trichocarpa] gi|222872233|gb|EEF09364.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = +2

Query: 2   SYINLYGRYPPGLFASQCREGKNGLDCAEFDNLKLEKNTGYTVRSL-SSYLVAAICFVLL 178
           S+INLYG+YPPGLFA++CRE KNGLDC   +  K  K+ G  + +  SS L+     ++L
Sbjct: 103 SFINLYGKYPPGLFANECREDKNGLDCQNVEQSK--KSGGVQIAATQSSLLMLTAGLIVL 160

Query: 179 IQMF 190
           +Q+F
Sbjct: 161 LQLF 164


>ref|XP_002325596.1| predicted protein [Populus trichocarpa] gi|222862471|gb|EEE99977.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/60 (48%), Positives = 39/60 (65%)
 Frame = +2

Query: 2   SYINLYGRYPPGLFASQCREGKNGLDCAEFDNLKLEKNTGYTVRSLSSYLVAAICFVLLI 181
           SYINLYG+YPPGLFA++CRE KNGLDC   D  K  K  G  + +  S L+     ++++
Sbjct: 66  SYINLYGKYPPGLFANECREDKNGLDCQNVDQSK--KGGGVQIAATQSSLLTLTAGLIVL 123


>gb|AFK37390.1| unknown [Lotus japonicus]
          Length = 171

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
 Frame = +2

Query: 2   SYINLYGRYPPGLFASQCREGKNGLDCAEFDNLKLEKNT-GYTVRSLSSYLVAAICFVLL 178
           SYINLYG+YPPGLFA +CREGK GL C       L  +T    V   S  LV   CF++L
Sbjct: 110 SYINLYGKYPPGLFAHECREGKEGLACPALPPSALADDTSSQVVHFPSLVLVLTACFLIL 169

Query: 179 I 181
           +
Sbjct: 170 L 170


>ref|XP_003598311.1| GPI-anchored protein LORELEI [Medicago truncatula]
           gi|355487359|gb|AES68562.1| GPI-anchored protein LORELEI
           [Medicago truncatula] gi|388514375|gb|AFK45249.1|
           unknown [Medicago truncatula]
          Length = 170

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
 Frame = +2

Query: 2   SYINLYGRYPPGLFASQCREGKNGLDC-AEFDNLKLEKNTGYTVRSLSSYLVAAICFVLL 178
           SYINLYGRYPPGLFAS+CREGK GL C A   ++  +      V + S  LV   C  L+
Sbjct: 108 SYINLYGRYPPGLFASECREGKEGLACDALPPSVSADDTANQIVHTPSLVLVLTACIFLI 167

Query: 179 I 181
           +
Sbjct: 168 L 168


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