BLASTX nr result

ID: Coptis23_contig00024956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024956
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276755.2| PREDICTED: uncharacterized protein LOC100263...   220   2e-55
emb|CAN76813.1| hypothetical protein VITISV_044114 [Vitis vinifera]   218   8e-55
ref|XP_002273303.1| PREDICTED: uncharacterized protein LOC100265...   213   3e-53
emb|CAN70903.1| hypothetical protein VITISV_028215 [Vitis vinifera]   213   3e-53
ref|XP_002301401.1| predicted protein [Populus trichocarpa] gi|2...   208   8e-52

>ref|XP_002276755.2| PREDICTED: uncharacterized protein LOC100263682 [Vitis vinifera]
          Length = 450

 Score =  220 bits (560), Expect = 2e-55
 Identities = 116/194 (59%), Positives = 138/194 (71%), Gaps = 17/194 (8%)
 Frame = +2

Query: 113 MVKKMRFEWNPCSSVNKNNHVIAKFAVTFFLMGLAFRLLYSHSIGYLPISVEQVEKP--- 283
           MV++MRFE NP S ++++NH   K A+ F LMGLA RL +S SI +   +V+ VE P   
Sbjct: 1   MVQEMRFEMNPFS-LHQHNHTFVKCALCFVLMGLAVRLWFSDSIRFSS-AVDSVETPPEG 58

Query: 284 SVESLV------------LPAPTLVSSEILQTGYQNAQKE--KCDIFTGDWIPNPSGPIY 421
             ESL             LP  T VS +      Q +QK+  KCDIFTGDWIP+PSGP+Y
Sbjct: 59  KTESLAPEEQKAESLEDSLPIQTPVSVDFPGNDNQTSQKDSAKCDIFTGDWIPDPSGPVY 118

Query: 422 TNETCHVIQEPQNCMRNGRPDSGYLYWRWKPRDCELSQFDAERFLVVMRNKSWAFIGDSI 601
           TNE+CH I+  QNCMRNGRPDSGYLYWRW PRDCEL +F+ ERFL +MRNKSWAFIGDSI
Sbjct: 119 TNESCHAIENHQNCMRNGRPDSGYLYWRWNPRDCELPRFNPERFLDLMRNKSWAFIGDSI 178

Query: 602 SRNHVQSLLCILSK 643
           SRNHVQSLLCILS+
Sbjct: 179 SRNHVQSLLCILSQ 192


>emb|CAN76813.1| hypothetical protein VITISV_044114 [Vitis vinifera]
          Length = 486

 Score =  218 bits (555), Expect = 8e-55
 Identities = 115/193 (59%), Positives = 137/193 (70%), Gaps = 17/193 (8%)
 Frame = +2

Query: 116 VKKMRFEWNPCSSVNKNNHVIAKFAVTFFLMGLAFRLLYSHSIGYLPISVEQVEKP---S 286
           V++MRFE NP S ++++NH   K A+ F LMGLA RL +S SI +   +V+ VE P    
Sbjct: 39  VREMRFEMNPFS-LHQHNHTFVKCALCFVLMGLAVRLWFSDSIRFSS-AVDSVETPPEGK 96

Query: 287 VESLV------------LPAPTLVSSEILQTGYQNAQKE--KCDIFTGDWIPNPSGPIYT 424
            ESL             LP  T VS +      Q +QK+  KCDIFTGDWIP+PSGP+YT
Sbjct: 97  TESLAPEEQKAESLEDSLPIQTPVSVDFPGNDNQTSQKDSAKCDIFTGDWIPDPSGPVYT 156

Query: 425 NETCHVIQEPQNCMRNGRPDSGYLYWRWKPRDCELSQFDAERFLVVMRNKSWAFIGDSIS 604
           NE+CH I+  QNCMRNGRPDSGYLYWRW PRDCEL +F+ ERFL +MRNKSWAFIGDSIS
Sbjct: 157 NESCHXIENHQNCMRNGRPDSGYLYWRWNPRDCELPRFNPERFLDLMRNKSWAFIGDSIS 216

Query: 605 RNHVQSLLCILSK 643
           RNHVQSLLCILS+
Sbjct: 217 RNHVQSLLCILSQ 229


>ref|XP_002273303.1| PREDICTED: uncharacterized protein LOC100265666 [Vitis vinifera]
           gi|297742310|emb|CBI34459.3| unnamed protein product
           [Vitis vinifera]
          Length = 427

 Score =  213 bits (541), Expect = 3e-53
 Identities = 107/179 (59%), Positives = 127/179 (70%), Gaps = 2/179 (1%)
 Frame = +2

Query: 113 MVKKMRFEWNPCSSVNKNNHVIAKFAVTFFLMGLAFRLLYSHSIGYLPISVEQVEKPSVE 292
           MVK M   W    S++K+NH++ K AV+  LMGLAFRLL+ HS   +P      E P VE
Sbjct: 1   MVKNMGLNWR-LWSLHKHNHLLVKVAVSILLMGLAFRLLFVHST--VP------ETPFVE 51

Query: 293 SLVLPAPTLVSS--EILQTGYQNAQKEKCDIFTGDWIPNPSGPIYTNETCHVIQEPQNCM 466
             V+P P +     EI     +    EKCD+FTGDWIPNPSGP+YTNE+C +I+  QNCM
Sbjct: 52  KPVIPNPPVSEDVPEIRDPIPEKVVAEKCDLFTGDWIPNPSGPVYTNESCQLIETHQNCM 111

Query: 467 RNGRPDSGYLYWRWKPRDCELSQFDAERFLVVMRNKSWAFIGDSISRNHVQSLLCILSK 643
           +NGRPDS YLYWRW PRDCEL QFD  RFL +MRNK+WA IGDSI+RNHVQSLLCILSK
Sbjct: 112 KNGRPDSAYLYWRWSPRDCELPQFDPYRFLELMRNKAWALIGDSITRNHVQSLLCILSK 170


>emb|CAN70903.1| hypothetical protein VITISV_028215 [Vitis vinifera]
          Length = 420

 Score =  213 bits (541), Expect = 3e-53
 Identities = 103/164 (62%), Positives = 125/164 (76%)
 Frame = +2

Query: 152 SVNKNNHVIAKFAVTFFLMGLAFRLLYSHSIGYLPISVEQVEKPSVESLVLPAPTLVSSE 331
           S++K+NH++ K AV+  LMGLAFRLL+ HS   +P      E P VE  V+P P  VS +
Sbjct: 9   SLHKHNHLLVKVAVSILLMGLAFRLLFVHST--VP------ETPFVEKPVIPNPP-VSED 59

Query: 332 ILQTGYQNAQKEKCDIFTGDWIPNPSGPIYTNETCHVIQEPQNCMRNGRPDSGYLYWRWK 511
           + +      +KEKCD+FTGDWIPNPSGP+YTNE+C +I+  QNCM+NGRPDS YLYWRW 
Sbjct: 60  VPEIRDPIPEKEKCDLFTGDWIPNPSGPVYTNESCQLIETHQNCMKNGRPDSAYLYWRWS 119

Query: 512 PRDCELSQFDAERFLVVMRNKSWAFIGDSISRNHVQSLLCILSK 643
           PRDCEL QFD  RFL +MRNK+WA IGDSI+RNHVQSLLCILSK
Sbjct: 120 PRDCELPQFDPYRFLELMRNKAWALIGDSITRNHVQSLLCILSK 163


>ref|XP_002301401.1| predicted protein [Populus trichocarpa] gi|222843127|gb|EEE80674.1|
           predicted protein [Populus trichocarpa]
          Length = 441

 Score =  208 bits (529), Expect = 8e-52
 Identities = 106/181 (58%), Positives = 133/181 (73%), Gaps = 4/181 (2%)
 Frame = +2

Query: 113 MVKKMRFEWNPCSSVNKNNHVIAKFAVTFFLMGLAFRLLYSHSIGYLPI---SVEQVEKP 283
           MVK+MR + NP S ++K+N VI KFAV+F L+GLAFRLL S S  +  +   SV   E+ 
Sbjct: 1   MVKEMRSDLNPFS-LSKHNSVIIKFAVSFLLVGLAFRLLISGSFRFSSVVETSVPANEET 59

Query: 284 SVESLVLPAPTLVSSEILQTGY-QNAQKEKCDIFTGDWIPNPSGPIYTNETCHVIQEPQN 460
             ESL+   P   +S   +    QN+Q  KCD+FTG+WIP+PSGP YTN++C  I+  QN
Sbjct: 60  KPESLMASLPEEPASNDFEANKSQNSQSGKCDLFTGEWIPDPSGPFYTNQSCLQIEGHQN 119

Query: 461 CMRNGRPDSGYLYWRWKPRDCELSQFDAERFLVVMRNKSWAFIGDSISRNHVQSLLCILS 640
           CM+NGRPDSGYLYWRW PR C L +F+ ++FL +MRNKSWAFIGDSISRNHVQSLLCILS
Sbjct: 120 CMKNGRPDSGYLYWRWSPRGCSLPKFNPKKFLHLMRNKSWAFIGDSISRNHVQSLLCILS 179

Query: 641 K 643
           +
Sbjct: 180 Q 180


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