BLASTX nr result

ID: Coptis23_contig00024952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024952
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149348.1| PREDICTED: small ubiquitin-related modifier ...    75   8e-12
ref|XP_002321284.1| predicted protein [Populus trichocarpa] gi|1...    75   8e-12
ref|XP_002521079.1| conserved hypothetical protein [Ricinus comm...    75   1e-11
gb|ABK23000.1| unknown [Picea sitchensis] gi|116784220|gb|ABK232...    75   1e-11
ref|XP_002301600.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>ref|XP_004149348.1| PREDICTED: small ubiquitin-related modifier 2-like [Cucumis
           sativus] gi|449503205|ref|XP_004161886.1| PREDICTED:
           small ubiquitin-related modifier 2-like [Cucumis
           sativus]
          Length = 100

 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 39/81 (48%), Positives = 53/81 (65%)
 Frame = -2

Query: 376 KSAPIRLCLKNQEDYRVYFTIKRSDKLQKIIDDYGLSQSVQLNMVRFFFDGDRLRGERTP 197
           +SA I L +K Q+   V+F IKRS +L+K+++ Y   QSV LN + F FDG RLR E+TP
Sbjct: 16  QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP 75

Query: 196 KDYYMEEGDMIDVFGEQIDGG 134
           ++  ME+GD ID    Q  GG
Sbjct: 76  EELEMEDGDEIDAMLHQTGGG 96


>ref|XP_002321284.1| predicted protein [Populus trichocarpa] gi|118487404|gb|ABK95530.1|
           unknown [Populus trichocarpa]
           gi|222862057|gb|EEE99599.1| predicted protein [Populus
           trichocarpa]
          Length = 108

 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 39/82 (47%), Positives = 53/82 (64%)
 Frame = -2

Query: 376 KSAPIRLCLKNQEDYRVYFTIKRSDKLQKIIDDYGLSQSVQLNMVRFFFDGDRLRGERTP 197
           +SA I L +K Q+   V+F IKRS +L+K++  Y   QSV+ N + F FDG RLRGE+TP
Sbjct: 23  QSAHINLKVKGQDGNEVFFRIKRSTQLRKLMTAYCDRQSVEFNSIAFLFDGRRLRGEQTP 82

Query: 196 KDYYMEEGDMIDVFGEQIDGGN 131
            +  ME+GD ID    Q  GG+
Sbjct: 83  DELDMEDGDEIDAMLHQTGGGH 104


>ref|XP_002521079.1| conserved hypothetical protein [Ricinus communis]
           gi|223539648|gb|EEF41230.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 108

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 38/84 (45%), Positives = 54/84 (64%)
 Frame = -2

Query: 382 LTKSAPIRLCLKNQEDYRVYFTIKRSDKLQKIIDDYGLSQSVQLNMVRFFFDGDRLRGER 203
           + ++A I L +K Q+   ++F IKRS +L+K+I  Y   QSV+ N + F FDG RLRGE+
Sbjct: 22  MDQTAHINLKVKGQDGNEMFFRIKRSTQLRKLITAYCDRQSVEFNSIAFLFDGRRLRGEQ 81

Query: 202 TPKDYYMEEGDMIDVFGEQIDGGN 131
           TP +  ME+GD ID    Q  GG+
Sbjct: 82  TPDELEMEDGDEIDAMLHQTGGGD 105


>gb|ABK23000.1| unknown [Picea sitchensis] gi|116784220|gb|ABK23261.1| unknown
           [Picea sitchensis]
          Length = 102

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 39/89 (43%), Positives = 54/89 (60%)
 Frame = -2

Query: 403 RKRRRSLLTKSAPIRLCLKNQEDYRVYFTIKRSDKLQKIIDDYGLSQSVQLNMVRFFFDG 224
           ++  R  L + A I L +K Q+   V+F IKRS +L+K+++ Y   QS+  N + F FDG
Sbjct: 12  QEEERKPLDQGAHINLKVKGQDGNEVFFRIKRSTQLRKLMNAYCDRQSIDFNSIAFLFDG 71

Query: 223 DRLRGERTPKDYYMEEGDMIDVFGEQIDG 137
            RLRGE+TP +  MEEGD ID    Q  G
Sbjct: 72  RRLRGEQTPDELEMEEGDEIDAMLHQTGG 100


>ref|XP_002301600.1| predicted protein [Populus trichocarpa] gi|222843326|gb|EEE80873.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 38/80 (47%), Positives = 53/80 (66%)
 Frame = -2

Query: 376 KSAPIRLCLKNQEDYRVYFTIKRSDKLQKIIDDYGLSQSVQLNMVRFFFDGDRLRGERTP 197
           +SA I L +K Q+   V+F IKRS +L+K+++ Y   QSV++N + F FDG RLRGE+TP
Sbjct: 18  QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVEINSIAFLFDGRRLRGEQTP 77

Query: 196 KDYYMEEGDMIDVFGEQIDG 137
            +  ME+GD ID    Q  G
Sbjct: 78  DELDMEDGDEIDAMLHQTGG 97


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