BLASTX nr result

ID: Coptis23_contig00024942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024942
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ06702.1| unnamed protein product [Solanum lycopersicum]         97   3e-18
gb|AAR10861.1| putative transposase [Oryza sativa Japonica Group]      96   3e-18
gb|EEE59391.1| hypothetical protein OsJ_11516 [Oryza sativa Japo...    96   3e-18
ref|NP_001050533.1| Os03g0576100 [Oryza sativa Japonica Group] g...    96   3e-18
gb|ABA96391.1| transposon protein, putative, unclassified [Oryza...    96   6e-18

>dbj|BAJ06702.1| unnamed protein product [Solanum lycopersicum]
          Length = 718

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 48/124 (38%), Positives = 75/124 (60%)
 Frame = -2

Query: 541 VEHNHNLATPSKRHKLLSLRKVSKEQEQRLGNMQVAGVKVNLMLRYMGVEAKGIRNIGYT 362
           + HNH LA+P+ +  L S RK S+ Q+  +  +  +G++ + +   +  +A GI N+  T
Sbjct: 112 LNHNHELASPNSQKFLRSKRKKSEAQKNLIDLLNNSGIRPSKIASVLTTQAGGIENLNIT 171

Query: 361 ERDARNVLGKVRSHEL*LGDVKADLEFFERQQVDSPSFFYSIQMDPEGQTKNFFWADARS 182
            RD +N L   R + L  GD +  L++F+++Q DSP  FY+IQMD EG   N FW DARS
Sbjct: 172 GRDIQNYLSTKRQNCLEKGDAQLMLKYFQKRQSDSPGLFYAIQMDVEGHLANCFWVDARS 231

Query: 181 KMDY 170
           ++ Y
Sbjct: 232 RIAY 235


>gb|AAR10861.1| putative transposase [Oryza sativa Japonica Group]
          Length = 813

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 48/125 (38%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
 Frame = -2

Query: 541 VEHNHNLATPSKRHKLLSLRKVSKEQEQRLGNMQVAGVKVNLMLRYMGVEAKGIRNIGYT 362
           +EHNH+L +P+K HKL S R+V +   Q +G ++ AG+K   +  +M     G   + ++
Sbjct: 172 LEHNHDLVSPNKSHKLRSQRRVIEADRQLIGQIREAGMKPAQVYGFMKEWYGGADKVPFS 231

Query: 361 ERDARNVLGKVRSHEL*LGDVKADLEFFERQQVDSPSFFYSIQMDPE-GQTKNFFWADAR 185
           + D  N +G+ R   L   D +  LE+   +Q++ P+FFY+IQ+D E G+  NFFWAD +
Sbjct: 232 KMDCNNEIGRERKKYLESNDTQTLLEYLRNKQLEDPTFFYAIQVDKEDGRIANFFWADGQ 291

Query: 184 SKMDY 170
           S MDY
Sbjct: 292 SIMDY 296


>gb|EEE59391.1| hypothetical protein OsJ_11516 [Oryza sativa Japonica Group]
          Length = 790

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 48/125 (38%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
 Frame = -2

Query: 541 VEHNHNLATPSKRHKLLSLRKVSKEQEQRLGNMQVAGVKVNLMLRYMGVEAKGIRNIGYT 362
           +EHNH+L +P+K HKL S R+V +   Q +G ++ AG+K   +  +M     G   + ++
Sbjct: 118 LEHNHDLVSPNKSHKLRSQRRVIEADRQLIGQIREAGMKPAQVYGFMKEWYGGADKVPFS 177

Query: 361 ERDARNVLGKVRSHEL*LGDVKADLEFFERQQVDSPSFFYSIQMDPE-GQTKNFFWADAR 185
           + D  N +G+ R   L   D +  LE+   +Q++ P+FFY+IQ+D E G+  NFFWAD +
Sbjct: 178 KMDCNNEIGRERKKYLESNDTQTLLEYLRNKQLEDPTFFYAIQVDKEDGRIANFFWADGQ 237

Query: 184 SKMDY 170
           S MDY
Sbjct: 238 SIMDY 242


>ref|NP_001050533.1| Os03g0576100 [Oryza sativa Japonica Group]
           gi|108709452|gb|ABF97247.1| transposon protein,
           putative, unclassified, expressed [Oryza sativa Japonica
           Group] gi|113549004|dbj|BAF12447.1| Os03g0576100 [Oryza
           sativa Japonica Group] gi|215713603|dbj|BAG94740.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 777

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 48/125 (38%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
 Frame = -2

Query: 541 VEHNHNLATPSKRHKLLSLRKVSKEQEQRLGNMQVAGVKVNLMLRYMGVEAKGIRNIGYT 362
           +EHNH+L +P+K HKL S R+V +   Q +G ++ AG+K   +  +M     G   + ++
Sbjct: 172 LEHNHDLVSPNKSHKLRSQRRVIEADRQLIGQIREAGMKPAQVYGFMKEWYGGADKVPFS 231

Query: 361 ERDARNVLGKVRSHEL*LGDVKADLEFFERQQVDSPSFFYSIQMDPE-GQTKNFFWADAR 185
           + D  N +G+ R   L   D +  LE+   +Q++ P+FFY+IQ+D E G+  NFFWAD +
Sbjct: 232 KMDCNNEIGRERKKYLESNDTQTLLEYLRNKQLEDPTFFYAIQVDKEDGRIANFFWADGQ 291

Query: 184 SKMDY 170
           S MDY
Sbjct: 292 SIMDY 296


>gb|ABA96391.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 773

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 48/132 (36%), Positives = 74/132 (56%)
 Frame = -2

Query: 541 VEHNHNLATPSKRHKLLSLRKVSKEQEQRLGNMQVAGVKVNLMLRYMGVEAKGIRNIGYT 362
           VEHNH L TP   H + S R +SK Q   +     +G+       ++G    G  N+GYT
Sbjct: 118 VEHNHLLQTPQTSHLMPSQRNISKHQAVEIEVAYDSGITPKAAHEFLGRHVGGSANLGYT 177

Query: 361 ERDARNVLGKVRSHEL*LGDVKADLEFFERQQVDSPSFFYSIQMDPEGQTKNFFWADARS 182
           +RD +N L   R  +L  G+  + L++F+ + V++PSF Y++Q+D E Q  N FWADAR 
Sbjct: 178 QRDHKNYLRSRRQRDLLYGEAGSLLKYFQDKIVENPSFHYAVQLDCEEQIANIFWADARM 237

Query: 181 KMDYHYILEIFS 146
             DY +  ++ +
Sbjct: 238 IADYAHFGDVIT 249


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