BLASTX nr result

ID: Coptis23_contig00024927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024927
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310724.1| predicted protein [Populus trichocarpa] gi|2...   101   5e-20
ref|XP_002523586.1| conserved hypothetical protein [Ricinus comm...   100   1e-19
ref|XP_003611744.1| hypothetical protein MTR_5g017410 [Medicago ...    99   4e-19
ref|XP_002877740.1| hypothetical protein ARALYDRAFT_485385 [Arab...    97   1e-18
ref|XP_002306469.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18

>ref|XP_002310724.1| predicted protein [Populus trichocarpa] gi|222853627|gb|EEE91174.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score =  101 bits (252), Expect = 5e-20
 Identities = 52/85 (61%), Positives = 61/85 (71%)
 Frame = +3

Query: 3   EMLQVSACSFFGGETIXXXXXXXXXXXXXXXXXFSESLRISGWSCEEVTDALGFNFRPEK 182
           EM++VSA  FF GE +                 FS+SLR +GWS EEV+DALGF+FRPEK
Sbjct: 315 EMVEVSASGFFEGEMVILDNQAVLDALLLKVDRFSDSLRKAGWSSEEVSDALGFDFRPEK 374

Query: 183 ERKPLKKLSPEFVEKIGRLAESVSR 257
           ERKP+KKLSPE VEKIG+LAESVSR
Sbjct: 375 ERKPVKKLSPELVEKIGKLAESVSR 399


>ref|XP_002523586.1| conserved hypothetical protein [Ricinus communis]
           gi|223537148|gb|EEF38781.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 398

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/86 (59%), Positives = 61/86 (70%)
 Frame = +3

Query: 3   EMLQVSACSFFGGETIXXXXXXXXXXXXXXXXXFSESLRISGWSCEEVTDALGFNFRPEK 182
           E++ VSA  FF GE +                 FS+SLR +GWS EEV+DALGF+FRPEK
Sbjct: 313 EIVHVSASGFFEGEMVMLDNQAVRDALLLKADRFSDSLRKAGWSSEEVSDALGFDFRPEK 372

Query: 183 ERKPLKKLSPEFVEKIGRLAESVSRS 260
           ERKP+KKLSPE +EKIG+LAESVSRS
Sbjct: 373 ERKPVKKLSPELIEKIGKLAESVSRS 398


>ref|XP_003611744.1| hypothetical protein MTR_5g017410 [Medicago truncatula]
           gi|355513079|gb|AES94702.1| hypothetical protein
           MTR_5g017410 [Medicago truncatula]
          Length = 395

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/84 (59%), Positives = 60/84 (71%)
 Frame = +3

Query: 3   EMLQVSACSFFGGETIXXXXXXXXXXXXXXXXXFSESLRISGWSCEEVTDALGFNFRPEK 182
           EM+QVSAC FF GE +                 FS+SLR +GWS EEV++ALGF+FRPEK
Sbjct: 310 EMVQVSACGFFEGEMVMLDNQALLDALLLKADRFSDSLRKAGWSSEEVSEALGFDFRPEK 369

Query: 183 ERKPLKKLSPEFVEKIGRLAESVS 254
           ERKP+KKLSPE VEKI +LA+SVS
Sbjct: 370 ERKPVKKLSPELVEKIEKLAQSVS 393


>ref|XP_002877740.1| hypothetical protein ARALYDRAFT_485385 [Arabidopsis lyrata subsp.
           lyrata] gi|297323578|gb|EFH53999.1| hypothetical protein
           ARALYDRAFT_485385 [Arabidopsis lyrata subsp. lyrata]
          Length = 403

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/86 (56%), Positives = 61/86 (70%)
 Frame = +3

Query: 3   EMLQVSACSFFGGETIXXXXXXXXXXXXXXXXXFSESLRISGWSCEEVTDALGFNFRPEK 182
           +++ VSA  FF GE +                 FSESLR +GWS EEV+DALGF+FRPEK
Sbjct: 318 DIVHVSASGFFEGEMVILDNQAVLDALLLKAGRFSESLRKAGWSSEEVSDALGFDFRPEK 377

Query: 183 ERKPLKKLSPEFVEKIGRLAESVSRS 260
           E+KP+KKLSPE V++IG+LAESVSRS
Sbjct: 378 EKKPVKKLSPELVQRIGKLAESVSRS 403


>ref|XP_002306469.1| predicted protein [Populus trichocarpa] gi|222855918|gb|EEE93465.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 51/85 (60%), Positives = 59/85 (69%)
 Frame = +3

Query: 3   EMLQVSACSFFGGETIXXXXXXXXXXXXXXXXXFSESLRISGWSCEEVTDALGFNFRPEK 182
           EM+QVSA  FF GE +                 FS+SLR +GWS EEV+DALGF+FR EK
Sbjct: 315 EMVQVSASGFFEGEMVILDNQAILDALLLKVDRFSDSLRKAGWSSEEVSDALGFDFRAEK 374

Query: 183 ERKPLKKLSPEFVEKIGRLAESVSR 257
           ERKP+K LSPE VEKIG+LAESVSR
Sbjct: 375 ERKPVKTLSPELVEKIGKLAESVSR 399


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