BLASTX nr result

ID: Coptis23_contig00024923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024923
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447968.1| hypothetical protein SORBIDRAFT_06g019043 [S...    63   9e-08
ref|XP_002445293.1| hypothetical protein SORBIDRAFT_07g007880 [S...    60   6e-07
ref|XP_002489305.1| hypothetical protein SORBIDRAFT_0010s007680 ...    58   3e-06
ref|XP_002445703.1| hypothetical protein SORBIDRAFT_07g024435 [S...    57   5e-06
ref|XP_002465815.1| hypothetical protein SORBIDRAFT_01g046340 [S...    57   5e-06

>ref|XP_002447968.1| hypothetical protein SORBIDRAFT_06g019043 [Sorghum bicolor]
           gi|241939151|gb|EES12296.1| hypothetical protein
           SORBIDRAFT_06g019043 [Sorghum bicolor]
          Length = 678

 Score = 63.2 bits (152), Expect = 9e-08
 Identities = 34/141 (24%), Positives = 66/141 (46%)
 Frame = -3

Query: 928 IESLLKEQPWIVSNHIFQIVSWEEYNESGDEAFLKFHVWINLLNYPSIFLDSHIVMDNIF 749
           +E +    PW+V  H   + +++E  +  +  F +  +W+ LLN P  +++ H     + 
Sbjct: 1   MERVFGGSPWMVGRHALLLQTYDENLKPSEIRFDRMDIWVRLLNLPLGWMNRHRGERAMG 60

Query: 748 DSGLLTPTQIKLIELYKQQGNEPAFVRIKAVLDSRDPIPPGFLMPVPFKGNQTQWIQFAY 569
             G+     +K +++ K      A++R +  ++   P+  G L+    K  + +W    Y
Sbjct: 61  LVGV-----VKKMDVDKDGKASGAYLRARVAVEVAKPLRRGVLLRTK-KDVEPEWFDLQY 114

Query: 568 EYLPMFCFRCGFLGHIIANCE 506
           E LP FC  CG +GH    C+
Sbjct: 115 EKLPFFCLSCGIMGHSELECD 135


>ref|XP_002445293.1| hypothetical protein SORBIDRAFT_07g007880 [Sorghum bicolor]
           gi|241941643|gb|EES14788.1| hypothetical protein
           SORBIDRAFT_07g007880 [Sorghum bicolor]
          Length = 388

 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 33/140 (23%), Positives = 66/140 (47%)
 Frame = -3

Query: 928 IESLLKEQPWIVSNHIFQIVSWEEYNESGDEAFLKFHVWINLLNYPSIFLDSHIVMDNIF 749
           +E +L   PW+V  H   +  ++E   + +  F +  +W+ +LN P  +++   +     
Sbjct: 114 MERILAGSPWMVGRHAVILKQYDERLSASEIVFDRMEIWVRILNLPLGWMN---LQRGNR 170

Query: 748 DSGLLTPTQIKLIELYKQQGNEPAFVRIKAVLDSRDPIPPGFLMPVPFKGNQTQWIQFAY 569
             GL+    +  +++ +      AF+R +  ++   P+  G L+ +  +  + +W    Y
Sbjct: 171 AMGLIG--NVIKMDVDRDGKASGAFLRARLAIEIDKPLRRGVLLRMS-RSEEPKWFAVQY 227

Query: 568 EYLPMFCFRCGFLGHIIANC 509
           E LP FCF CG +GH    C
Sbjct: 228 ERLPFFCFACGIMGHSEIEC 247


>ref|XP_002489305.1| hypothetical protein SORBIDRAFT_0010s007680 [Sorghum bicolor]
           gi|241946953|gb|EES20098.1| hypothetical protein
           SORBIDRAFT_0010s007680 [Sorghum bicolor]
          Length = 531

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 11/151 (7%)
 Frame = -3

Query: 928 IESLLKEQPWIVSNHIFQIVSWEEYNESGDEAFLKFHVWINLLNYP-----------SIF 782
           +E +L   PWIV  H   +  + E   + +  F +  +W+ + N P           ++ 
Sbjct: 107 LERVLAGTPWIVGRHAVILKDYNEKLSASEIVFDRMEIWVRIPNLPLGWMNQTRGSRAMS 166

Query: 781 LDSHIVMDNIFDSGLLTPTQIKLIELYKQQGNEPAFVRIKAVLDSRDPIPPGFLMPVPFK 602
           L   +V  ++ D G             K  G   AF+R +  ++   P+  G L+ +  K
Sbjct: 167 LIGPVVRMDVDDDG-------------KASG---AFLRARVAIEIDKPLRRGVLLRMS-K 209

Query: 601 GNQTQWIQFAYEYLPMFCFRCGFLGHIIANC 509
             + +W    YE LP +CF CG +GH    C
Sbjct: 210 AEEPRWFHAQYEKLPYYCFGCGIMGHSEVEC 240


>ref|XP_002445703.1| hypothetical protein SORBIDRAFT_07g024435 [Sorghum bicolor]
           gi|241942053|gb|EES15198.1| hypothetical protein
           SORBIDRAFT_07g024435 [Sorghum bicolor]
          Length = 785

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 37/144 (25%), Positives = 68/144 (47%)
 Frame = -3

Query: 925 ESLLKEQPWIVSNHIFQIVSWEEYNESGDEAFLKFHVWINLLNYPSIFLDSHIVMDNIFD 746
           E +L   PW+V  +   +  ++E   + D  F +  +W+ +LN P  +++       +  
Sbjct: 108 ERVLGGSPWMVGKYSVLLQEYDEKLCAADIKFDRLDLWVRILNLPLGWMNRSRGSRAM-- 165

Query: 745 SGLLTPTQIKLIELYKQQGNEPAFVRIKAVLDSRDPIPPGFLMPVPFKGNQTQWIQFAYE 566
            GL+   Q+  +++        AF+R +  ++   P+  G L+ V  K ++ +W Q  YE
Sbjct: 166 -GLIG--QVVEMDVDADGKASGAFLRARVSMEIDKPVRRGILLRVN-KTDEPRWFQAQYE 221

Query: 565 YLPMFCFRCGFLGHIIANCEVGMA 494
            LP  CF CG +GH    C   +A
Sbjct: 222 KLPYMCFACGIIGHSDMECPTPVA 245


>ref|XP_002465815.1| hypothetical protein SORBIDRAFT_01g046340 [Sorghum bicolor]
           gi|241919669|gb|EER92813.1| hypothetical protein
           SORBIDRAFT_01g046340 [Sorghum bicolor]
          Length = 1028

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 3/171 (1%)
 Frame = -3

Query: 928 IESLLKEQPWIVSNHIFQIVSWEEYNESGDEAFLKFHVWINLLNYPSIFLDSHI---VMD 758
           +E +L   PW+V  H   +  ++E   + +  F +  +W+ +LN P  +++      VM 
Sbjct: 113 LERVLSGTPWMVGKHAIVLKLYDEKLSASEIVFDRMDIWVRILNLPLGWMNQQRGARVMS 172

Query: 757 NIFDSGLLTPTQIKLIELYKQQGNEPAFVRIKAVLDSRDPIPPGFLMPVPFKGNQTQWIQ 578
                  L  + +KL ++        AF+R +  ++   P+  G L+ +  K  + +W +
Sbjct: 173 -------LIGSVVKL-DVDSDGKASGAFLRGRVSIEIDKPLRRGVLLRMS-KSEEPKWFE 223

Query: 577 FAYEYLPMFCFRCGFLGHIIANCEVGMAAMPTLASSSKTEDNVELYNPRSR 425
             YE LP +C  CG LGH     E+G +       + K   +++L  P  +
Sbjct: 224 AQYEKLPYYCSSCGMLGH----SEIGCSQPAQRNEAGKLPYDIQLRAPEEK 270


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