BLASTX nr result

ID: Coptis23_contig00024921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024921
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20251.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_002282682.1| PREDICTED: homeobox-leucine zipper protein A...    97   1e-18
ref|XP_002330748.1| predicted protein [Populus trichocarpa] gi|1...    92   6e-17
ref|XP_002273463.1| PREDICTED: homeobox-leucine zipper protein A...    91   1e-16
ref|XP_003527218.1| PREDICTED: homeobox-leucine zipper protein A...    87   2e-15

>emb|CBI20251.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/66 (71%), Positives = 55/66 (83%)
 Frame = +3

Query: 24  SQNQKSIPKRYKNRLTEEQLRLLEASFNHEKKLEPERKFQLAYELGMPPKQVAIWYQNKR 203
           SQ+QK     +K RLT++Q+RLLE SF+H KKLEPERK  LA ELG+PP+QVAIWYQNKR
Sbjct: 6   SQHQK-----HKKRLTQDQVRLLETSFDHGKKLEPERKLHLARELGVPPRQVAIWYQNKR 60

Query: 204 ARWKTQ 221
           ARWKTQ
Sbjct: 61  ARWKTQ 66


>ref|XP_002282682.1| PREDICTED: homeobox-leucine zipper protein ATHB-52-like [Vitis
           vinifera]
          Length = 161

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/66 (71%), Positives = 55/66 (83%)
 Frame = +3

Query: 24  SQNQKSIPKRYKNRLTEEQLRLLEASFNHEKKLEPERKFQLAYELGMPPKQVAIWYQNKR 203
           SQ+QK     +K RLT++Q+RLLE SF+H KKLEPERK  LA ELG+PP+QVAIWYQNKR
Sbjct: 6   SQHQK-----HKKRLTQDQVRLLETSFDHGKKLEPERKLHLARELGVPPRQVAIWYQNKR 60

Query: 204 ARWKTQ 221
           ARWKTQ
Sbjct: 61  ARWKTQ 66


>ref|XP_002330748.1| predicted protein [Populus trichocarpa] gi|118486271|gb|ABK94977.1|
           unknown [Populus trichocarpa]
           gi|222872524|gb|EEF09655.1| predicted protein [Populus
           trichocarpa]
          Length = 170

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/66 (66%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
 Frame = +3

Query: 27  QNQKSIPKRY-KNRLTEEQLRLLEASFNHEKKLEPERKFQLAYELGMPPKQVAIWYQNKR 203
           Q Q+ +PK   K RLTE+Q+RLLE +F   KKLEPE K QLA +LG+PP+Q+AIWYQNKR
Sbjct: 10  QKQQYLPKHNNKKRLTEDQVRLLERTFTTNKKLEPELKVQLANQLGVPPRQIAIWYQNKR 69

Query: 204 ARWKTQ 221
           ARWKTQ
Sbjct: 70  ARWKTQ 75


>ref|XP_002273463.1| PREDICTED: homeobox-leucine zipper protein ATHB-52 [Vitis vinifera]
           gi|147785778|emb|CAN64250.1| hypothetical protein
           VITISV_002432 [Vitis vinifera]
          Length = 171

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/67 (64%), Positives = 53/67 (79%)
 Frame = +3

Query: 21  KSQNQKSIPKRYKNRLTEEQLRLLEASFNHEKKLEPERKFQLAYELGMPPKQVAIWYQNK 200
           +SQ +K  PK  K RLT++Q+RLLE SF+   KL+ +RK QLA ELG+PP+QVAIWYQNK
Sbjct: 5   QSQARKHQPKFSKKRLTKDQVRLLETSFDLNNKLDSDRKLQLAQELGIPPRQVAIWYQNK 64

Query: 201 RARWKTQ 221
           RARWK Q
Sbjct: 65  RARWKNQ 71


>ref|XP_003527218.1| PREDICTED: homeobox-leucine zipper protein ATHB-52-like [Glycine
           max]
          Length = 200

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 39/66 (59%), Positives = 51/66 (77%)
 Frame = +3

Query: 24  SQNQKSIPKRYKNRLTEEQLRLLEASFNHEKKLEPERKFQLAYELGMPPKQVAIWYQNKR 203
           + +Q++     K RLTE+Q+ +LE  F+   KLEPE+KF LA +LG+PP+QVAIWYQNKR
Sbjct: 17  AHHQRAKHNNNKKRLTEDQVAILEKCFSSNMKLEPEQKFHLANQLGLPPRQVAIWYQNKR 76

Query: 204 ARWKTQ 221
           ARWKTQ
Sbjct: 77  ARWKTQ 82


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