BLASTX nr result

ID: Coptis23_contig00024917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024917
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278573.1| PREDICTED: uncharacterized membrane protein ...   121   3e-45
ref|NP_188798.2| Acid phosphatase/vanadium-dependent haloperoxid...   127   6e-45
ref|XP_002885453.1| hypothetical protein ARALYDRAFT_898610 [Arab...   127   6e-44
ref|XP_003596939.1| Membrane protein, putative [Medicago truncat...   119   8e-44
gb|AFK33902.1| unknown [Medicago truncatula]                          119   8e-44

>ref|XP_002278573.1| PREDICTED: uncharacterized membrane protein yuiD [Vitis vinifera]
           gi|297737478|emb|CBI26679.3| unnamed protein product
           [Vitis vinifera]
          Length = 166

 Score =  121 bits (304), Expect(2) = 3e-45
 Identities = 54/70 (77%), Positives = 67/70 (95%)
 Frame = +1

Query: 250 LSIVLAAVVMYDASGVRLHAGRQAELLNQIVCEFPPEHPLSSVRPLRELLGHTPLQVIAG 429
           +++VLA VVMYDASGVRLHAGRQAELLNQIVCE PP+HP+S+VRPLR+ LGHTPLQV+AG
Sbjct: 94  IAVVLACVVMYDASGVRLHAGRQAELLNQIVCELPPDHPVSNVRPLRDSLGHTPLQVVAG 153

Query: 430 AILGCLVSYV 459
           ++LGC+V+Y+
Sbjct: 154 SVLGCVVAYL 163



 Score = 85.9 bits (211), Expect(2) = 3e-45
 Identities = 38/44 (86%), Positives = 42/44 (95%)
 Frame = +3

Query: 3   FTTWYKEKRWDSRRIFGSGGMPSSHSATVSALAVAIGFEDGIGG 134
           FTTWYKEKRWDSRR+ GSGGMPSSHSATV+ALAVAIGF++G GG
Sbjct: 46  FTTWYKEKRWDSRRMLGSGGMPSSHSATVTALAVAIGFQEGTGG 89


>ref|NP_188798.2| Acid phosphatase/vanadium-dependent haloperoxidase-related protein
           [Arabidopsis thaliana] gi|22135978|gb|AAM91571.1|
           unknown protein [Arabidopsis thaliana]
           gi|23198278|gb|AAN15666.1| unknown protein [Arabidopsis
           thaliana] gi|332643008|gb|AEE76529.1| Acid
           phosphatase/vanadium-dependent haloperoxidase-related
           protein [Arabidopsis thaliana]
          Length = 174

 Score =  127 bits (319), Expect(2) = 6e-45
 Identities = 59/70 (84%), Positives = 67/70 (95%)
 Frame = +1

Query: 250 LSIVLAAVVMYDASGVRLHAGRQAELLNQIVCEFPPEHPLSSVRPLRELLGHTPLQVIAG 429
           +++VLA VVMYDASGVRLHAGRQAELLNQIVCEFPPEHPLS+VRPLRELLGHTP+QV AG
Sbjct: 100 IAVVLACVVMYDASGVRLHAGRQAELLNQIVCEFPPEHPLSTVRPLRELLGHTPIQVAAG 159

Query: 430 AILGCLVSYV 459
            ILGC+V+Y+
Sbjct: 160 GILGCVVAYL 169



 Score = 79.3 bits (194), Expect(2) = 6e-45
 Identities = 35/43 (81%), Positives = 39/43 (90%)
 Frame = +3

Query: 3   FTTWYKEKRWDSRRIFGSGGMPSSHSATVSALAVAIGFEDGIG 131
           FT WYKEKRWDS+R+  SGGMPSSHSATV+ALAVAIGFE+G G
Sbjct: 52  FTNWYKEKRWDSKRMISSGGMPSSHSATVTALAVAIGFEEGAG 94


>ref|XP_002885453.1| hypothetical protein ARALYDRAFT_898610 [Arabidopsis lyrata subsp.
           lyrata] gi|297331293|gb|EFH61712.1| hypothetical protein
           ARALYDRAFT_898610 [Arabidopsis lyrata subsp. lyrata]
          Length = 174

 Score =  127 bits (319), Expect(2) = 6e-44
 Identities = 59/70 (84%), Positives = 67/70 (95%)
 Frame = +1

Query: 250 LSIVLAAVVMYDASGVRLHAGRQAELLNQIVCEFPPEHPLSSVRPLRELLGHTPLQVIAG 429
           +++VLA VVMYDASGVRLHAGRQAELLNQIVCEFPPEHPLS+VRPLRELLGHTP+QV AG
Sbjct: 100 IAVVLACVVMYDASGVRLHAGRQAELLNQIVCEFPPEHPLSTVRPLRELLGHTPIQVAAG 159

Query: 430 AILGCLVSYV 459
            ILGC+V+Y+
Sbjct: 160 GILGCVVAYL 169



 Score = 75.9 bits (185), Expect(2) = 6e-44
 Identities = 33/43 (76%), Positives = 38/43 (88%)
 Frame = +3

Query: 3   FTTWYKEKRWDSRRIFGSGGMPSSHSATVSALAVAIGFEDGIG 131
           FT WYKEK+WDS+R+  SGGMPSSHSATV+ALAVAIG E+G G
Sbjct: 52  FTNWYKEKKWDSKRMISSGGMPSSHSATVTALAVAIGLEEGAG 94


>ref|XP_003596939.1| Membrane protein, putative [Medicago truncatula]
           gi|355485987|gb|AES67190.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 167

 Score =  119 bits (299), Expect(2) = 8e-44
 Identities = 51/70 (72%), Positives = 66/70 (94%)
 Frame = +1

Query: 250 LSIVLAAVVMYDASGVRLHAGRQAELLNQIVCEFPPEHPLSSVRPLRELLGHTPLQVIAG 429
           ++++LA +VMYDA+GVRLHAGRQAELLNQIVCE PPEHPLS+VRPLR+ LGHTPLQV+AG
Sbjct: 93  IAVILACIVMYDATGVRLHAGRQAELLNQIVCELPPEHPLSNVRPLRDSLGHTPLQVVAG 152

Query: 430 AILGCLVSYV 459
            +LGC+++++
Sbjct: 153 GLLGCIIAFL 162



 Score = 83.2 bits (204), Expect(2) = 8e-44
 Identities = 37/43 (86%), Positives = 41/43 (95%)
 Frame = +3

Query: 3   FTTWYKEKRWDSRRIFGSGGMPSSHSATVSALAVAIGFEDGIG 131
           FTTWYKEKRWDS+R+  SGGMPSSHSATVSALAVAIGF++GIG
Sbjct: 45  FTTWYKEKRWDSKRLLDSGGMPSSHSATVSALAVAIGFQEGIG 87


>gb|AFK33902.1| unknown [Medicago truncatula]
          Length = 167

 Score =  119 bits (299), Expect(2) = 8e-44
 Identities = 51/70 (72%), Positives = 66/70 (94%)
 Frame = +1

Query: 250 LSIVLAAVVMYDASGVRLHAGRQAELLNQIVCEFPPEHPLSSVRPLRELLGHTPLQVIAG 429
           ++++LA +VMYDA+GVRLHAGRQAELLNQIVCE PPEHPLS+VRPLR+ LGHTPLQV+AG
Sbjct: 93  IAVILACIVMYDATGVRLHAGRQAELLNQIVCELPPEHPLSNVRPLRDSLGHTPLQVVAG 152

Query: 430 AILGCLVSYV 459
            +LGC+++++
Sbjct: 153 GLLGCIIAFL 162



 Score = 83.2 bits (204), Expect(2) = 8e-44
 Identities = 37/43 (86%), Positives = 41/43 (95%)
 Frame = +3

Query: 3   FTTWYKEKRWDSRRIFGSGGMPSSHSATVSALAVAIGFEDGIG 131
           FTTWYKEKRWDS+R+  SGGMPSSHSATVSALAVAIGF++GIG
Sbjct: 45  FTTWYKEKRWDSKRLLDSGGMPSSHSATVSALAVAIGFQEGIG 87


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