BLASTX nr result

ID: Coptis23_contig00024896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024896
         (1114 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156094.1| PREDICTED: LOW QUALITY PROTEIN: vacuolar pro...   339   6e-91
ref|XP_004140122.1| PREDICTED: vacuolar protein 8-like [Cucumis ...   339   6e-91
ref|XP_002321152.1| predicted protein [Populus trichocarpa] gi|2...   339   8e-91
ref|XP_002271314.1| PREDICTED: vacuolar protein 8 [Vitis vinifera]    335   9e-90
ref|XP_002301599.1| predicted protein [Populus trichocarpa] gi|2...   332   8e-89

>ref|XP_004156094.1| PREDICTED: LOW QUALITY PROTEIN: vacuolar protein 8-like [Cucumis
            sativus]
          Length = 574

 Score =  339 bits (870), Expect = 6e-91
 Identities = 171/299 (57%), Positives = 233/299 (77%)
 Frame = -3

Query: 1106 DLENAWAVSAYGGVAILIDACRSGSPVTQSHAVGSIKNVASVEEIRVALAEDGGVIVLVQ 927
            D ENAWAVSAYGG+++LIDACRSG+P  Q+ AVG+I+NV +VE+I+ +L E+G + VL+Q
Sbjct: 273  DSENAWAVSAYGGISVLIDACRSGTPSLQTSAVGAIRNVTAVEDIKASLVEEGVIPVLLQ 332

Query: 926  LLGSNNTCTQEKSANCLWILASASEDFRNSILQEGGLQKLLHLLQESANPDTLEHVLRAI 747
            LL S+ T +QEK+A    +LAS+ E FR  I+QE GLQ+LLHL+ +SA+ DT+E  LRA+
Sbjct: 333  LLVSSTTASQEKAAMSTAVLASSGEYFRTLIIQERGLQRLLHLIHDSASSDTIESALRAL 392

Query: 746  YALSGSTPSLKILQSSISFIVQLAELIKHGNITTQQISASILCNLSINESTKRLMSGCMG 567
             +L+ S    +IL SS  F+++L EL+KHGN+  QQI+AS++ NLSI++  KR +  CMG
Sbjct: 393  SSLAVSDSVARILSSSTLFVMKLGELVKHGNLVLQQIAASLVSNLSISDGNKRAIGSCMG 452

Query: 566  SLVKMMELSKPIGLQETXXXXXXXXXXXXSNRKELVRDGKSVLKLVQMLDPKNELVCKNF 387
            SLVK+ME+ KP G+QE             SNRKEL++D KSV++L+QMLDPKNE+V K+F
Sbjct: 453  SLVKLMEMPKPAGVQEVAVRALASLLTVRSNRKELMKDEKSVMRLMQMLDPKNEVVGKSF 512

Query: 386  PVYIVSAILSGGSNGCRKKLVSAGAFLHLQKLSDMDVAGAKKALQRLAGNRLKNIFSRT 210
            P+ IV+A+L+GGS GCRK+L+ AGA+ HLQ L+DM+VAGAKKALQRL GNRL++IF+RT
Sbjct: 513  PLAIVTAVLAGGSKGCRKRLLDAGAYQHLQNLTDMNVAGAKKALQRLNGNRLRSIFNRT 571


>ref|XP_004140122.1| PREDICTED: vacuolar protein 8-like [Cucumis sativus]
          Length = 574

 Score =  339 bits (870), Expect = 6e-91
 Identities = 171/299 (57%), Positives = 233/299 (77%)
 Frame = -3

Query: 1106 DLENAWAVSAYGGVAILIDACRSGSPVTQSHAVGSIKNVASVEEIRVALAEDGGVIVLVQ 927
            D ENAWAVSAYGG+++LIDACRSG+P  Q+ AVG+I+NV +VE+I+ +L E+G + VL+Q
Sbjct: 273  DSENAWAVSAYGGISVLIDACRSGTPSLQTSAVGAIRNVTAVEDIKASLVEEGVIPVLLQ 332

Query: 926  LLGSNNTCTQEKSANCLWILASASEDFRNSILQEGGLQKLLHLLQESANPDTLEHVLRAI 747
            LL S+ T +QEK+A    +LAS+ E FR  I+QE GLQ+LLHL+ +SA+ DT+E  LRA+
Sbjct: 333  LLVSSTTASQEKAAMSTAVLASSGEYFRTLIIQERGLQRLLHLIHDSASSDTIESALRAL 392

Query: 746  YALSGSTPSLKILQSSISFIVQLAELIKHGNITTQQISASILCNLSINESTKRLMSGCMG 567
             +L+ S    +IL SS  F+++L EL+KHGN+  QQI+AS++ NLSI++  KR +  CMG
Sbjct: 393  SSLAVSDSVARILSSSTLFVMKLGELVKHGNLVLQQIAASLVSNLSISDGNKRAIGSCMG 452

Query: 566  SLVKMMELSKPIGLQETXXXXXXXXXXXXSNRKELVRDGKSVLKLVQMLDPKNELVCKNF 387
            SLVK+ME+ KP G+QE             SNRKEL++D KSV++L+QMLDPKNE+V K+F
Sbjct: 453  SLVKLMEMPKPAGVQEVAVRALASLLTVRSNRKELMKDEKSVMRLMQMLDPKNEVVGKSF 512

Query: 386  PVYIVSAILSGGSNGCRKKLVSAGAFLHLQKLSDMDVAGAKKALQRLAGNRLKNIFSRT 210
            P+ IV+A+L+GGS GCRK+L+ AGA+ HLQ L+DM+VAGAKKALQRL GNRL++IF+RT
Sbjct: 513  PLAIVTAVLAGGSKGCRKRLLDAGAYQHLQNLTDMNVAGAKKALQRLNGNRLRSIFNRT 571


>ref|XP_002321152.1| predicted protein [Populus trichocarpa] gi|222861925|gb|EEE99467.1|
            predicted protein [Populus trichocarpa]
          Length = 566

 Score =  339 bits (869), Expect = 8e-91
 Identities = 171/301 (56%), Positives = 234/301 (77%)
 Frame = -3

Query: 1112 SSDLENAWAVSAYGGVAILIDACRSGSPVTQSHAVGSIKNVASVEEIRVALAEDGGVIVL 933
            + D +N WA+SAYGGV++LI+ACR GS  TQ+HAVG+I+NVA VE+I++ALAE+G V V+
Sbjct: 263  TGDPDNGWAISAYGGVSVLIEACRCGSQATQTHAVGAIRNVAGVEDIKMALAEEGVVPVI 322

Query: 932  VQLLGSNNTCTQEKSANCLWILASASEDFRNSILQEGGLQKLLHLLQESANPDTLEHVLR 753
            + L+ S ++  QEK+AN + ILAS+   FR+ I+QE GLQ+L+HL+Q+ ++ DT+EHVLR
Sbjct: 323  IHLIVSGSSAAQEKAANTIAILASSGGYFRDLIIQEKGLQRLMHLIQDLSSSDTIEHVLR 382

Query: 752  AIYALSGSTPSLKILQSSISFIVQLAELIKHGNITTQQISASILCNLSINESTKRLMSGC 573
            AI +LS S  + ++L SS + I+ L E IKHGN+T Q+ISAS+L NLSI++  KR ++ C
Sbjct: 383  AISSLSVSDSTAQVLSSSTALIIHLGEFIKHGNMTLQKISASLLANLSISDRNKRAIASC 442

Query: 572  MGSLVKMMELSKPIGLQETXXXXXXXXXXXXSNRKELVRDGKSVLKLVQMLDPKNELVCK 393
            MGSLVK+ME  KP+GLQE              N+KELVRD KS++K+VQMLDPK EL+ K
Sbjct: 443  MGSLVKLMESPKPVGLQEAGALALVSLLTARWNKKELVRDEKSLMKVVQMLDPKYELIDK 502

Query: 392  NFPVYIVSAILSGGSNGCRKKLVSAGAFLHLQKLSDMDVAGAKKALQRLAGNRLKNIFSR 213
             FPV +V+A+LSG S+GCRK+L+ AGA  HLQKL++M+V+GAKKALQRL+G  LK++FSR
Sbjct: 503  KFPVMLVNALLSGRSSGCRKRLLDAGACQHLQKLAEMEVSGAKKALQRLSGISLKSMFSR 562

Query: 212  T 210
            T
Sbjct: 563  T 563


>ref|XP_002271314.1| PREDICTED: vacuolar protein 8 [Vitis vinifera]
          Length = 569

 Score =  335 bits (860), Expect = 9e-90
 Identities = 175/301 (58%), Positives = 231/301 (76%)
 Frame = -3

Query: 1112 SSDLENAWAVSAYGGVAILIDACRSGSPVTQSHAVGSIKNVASVEEIRVALAEDGGVIVL 933
            ++D ENAWAVSAYGGV+ILI+ACRS +  TQ+HAVG+++NVA VE+IR +L E+G V +L
Sbjct: 266  TADPENAWAVSAYGGVSILIEACRSATSSTQTHAVGALRNVAVVEDIRNSLGEEGAVPIL 325

Query: 932  VQLLGSNNTCTQEKSANCLWILASASEDFRNSILQEGGLQKLLHLLQESANPDTLEHVLR 753
            VQLL S +   QEK+ANC+ ILAS+ E FR  I+QE GL +L+ LL +S++ + LEHVLR
Sbjct: 326  VQLLASGSGPAQEKAANCIAILASSGEYFRALIIQERGLLRLMQLLHDSSSSEALEHVLR 385

Query: 752  AIYALSGSTPSLKILQSSISFIVQLAELIKHGNITTQQISASILCNLSINESTKRLMSGC 573
             + +LS S    + L SS +FI+QL+ELIKHGNI  Q  +AS+L +LSI++  KR ++ C
Sbjct: 386  TLISLSASDSISRSLSSSTAFIIQLSELIKHGNIILQHSAASLLAHLSISDGNKRAIASC 445

Query: 572  MGSLVKMMELSKPIGLQETXXXXXXXXXXXXSNRKELVRDGKSVLKLVQMLDPKNELVCK 393
            + SLVK+ME SKP+GLQE             SNRKELVRD KSV++L+QMLDPK+ELVCK
Sbjct: 446  LASLVKLMESSKPVGLQEVAAQALVSLLAVRSNRKELVRDEKSVMRLMQMLDPKSELVCK 505

Query: 392  NFPVYIVSAILSGGSNGCRKKLVSAGAFLHLQKLSDMDVAGAKKALQRLAGNRLKNIFSR 213
             F V +V+A L+GGS GCRK+LV+AGA+  LQ+L++ +V GA+KALQRL GNRLK+IFSR
Sbjct: 506  KFLVAVVAATLAGGSQGCRKRLVAAGAYPLLQRLAETEVPGARKALQRLVGNRLKSIFSR 565

Query: 212  T 210
            T
Sbjct: 566  T 566


>ref|XP_002301599.1| predicted protein [Populus trichocarpa] gi|222843325|gb|EEE80872.1|
            predicted protein [Populus trichocarpa]
          Length = 573

 Score =  332 bits (852), Expect = 8e-89
 Identities = 173/302 (57%), Positives = 230/302 (76%), Gaps = 1/302 (0%)
 Frame = -3

Query: 1112 SSDLENAWAVSAYGGVAILIDACRSGSPVTQSHAVGSIKNVASVEEIRVALAEDGGVIVL 933
            + D +N WA+SAY GV++LI+AC+ GS VTQ+HAVG+I+NVA +E+IR+ALAE+G V V+
Sbjct: 269  TDDPDNGWAISAYHGVSVLIEACQCGSQVTQTHAVGAIRNVAGLEDIRMALAEEGVVPVI 328

Query: 932  VQLLGSNNTCTQEKSANCLWILASASEDFRNSILQEGGLQKLLHLLQE-SANPDTLEHVL 756
              LL S  +  QEK+A+C+ ILAS+ E FR  I+QE GLQ+L++L+Q+ S+   T+EH+L
Sbjct: 329  FHLLVSGTSAAQEKAADCVAILASSGEYFRTLIIQEKGLQRLMYLIQDLSSTSCTIEHIL 388

Query: 755  RAIYALSGSTPSLKILQSSISFIVQLAELIKHGNITTQQISASILCNLSINESTKRLMSG 576
            RAI +LS S    +IL SS + IV L ELIKHGNI +QQISAS+L NLSI++  KR ++ 
Sbjct: 389  RAISSLSVSDSVSQILSSSTALIVHLGELIKHGNIISQQISASLLANLSISDGNKRAIAS 448

Query: 575  CMGSLVKMMELSKPIGLQETXXXXXXXXXXXXSNRKELVRDGKSVLKLVQMLDPKNELVC 396
            CMGSLVK+ME  KP+GLQE              N+KEL RD K ++KLV+MLDP+ EL+ 
Sbjct: 449  CMGSLVKLMESPKPVGLQEAGALALLSLLTVRWNKKELARDEKGLMKLVKMLDPRCELID 508

Query: 395  KNFPVYIVSAILSGGSNGCRKKLVSAGAFLHLQKLSDMDVAGAKKALQRLAGNRLKNIFS 216
            K FPV +V A+LSG S GCRK+L++AG F HLQKL++M+VAGAKKALQRL+ NRLK++FS
Sbjct: 509  KKFPVMVVDALLSGRSGGCRKRLLAAGVFQHLQKLAEMEVAGAKKALQRLSENRLKSMFS 568

Query: 215  RT 210
            RT
Sbjct: 569  RT 570


Top