BLASTX nr result

ID: Coptis23_contig00024882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024882
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268798.2| PREDICTED: uncharacterized protein LOC100251...   192   1e-46
emb|CBI25573.3| unnamed protein product [Vitis vinifera]              192   1e-46
ref|XP_002331009.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43
ref|XP_002531448.1| conserved hypothetical protein [Ricinus comm...   177   3e-42
ref|XP_002270754.1| PREDICTED: uncharacterized membrane protein ...   167   5e-39

>ref|XP_002268798.2| PREDICTED: uncharacterized protein LOC100251745 [Vitis vinifera]
          Length = 573

 Score =  192 bits (487), Expect = 1e-46
 Identities = 90/110 (81%), Positives = 102/110 (92%)
 Frame = +2

Query: 302 VMVPTASELFGLKHFGVIYNFMLLGNPLGALIFSGGLAGYVYDKEAAKQQGLNLLSSSVS 481
           +MVPT SELFGLKHFG+ YNFM LGNPLGA +FSG LAG+VYD EAAKQQG+NLL+SSVS
Sbjct: 461 IMVPTVSELFGLKHFGIFYNFMSLGNPLGAFLFSGLLAGFVYDNEAAKQQGMNLLNSSVS 520

Query: 482 CLGPNCFRLTFLVLAGLCVLGSFLSVILTMRLKPVYQMLYSGGSFRLPQS 631
           CLGPNCFRLTFLVLAG+C +GS LS+ILTMR++PVYQMLYSGGSFRLPQ+
Sbjct: 521 CLGPNCFRLTFLVLAGVCGVGSILSIILTMRIRPVYQMLYSGGSFRLPQN 570



 Score =  100 bits (250), Expect = 4e-19
 Identities = 45/58 (77%), Positives = 54/58 (93%)
 Frame = +1

Query: 1   GSSDTTMLLSIFSFGNFVGRLGGGAISEHFVRSKTVPRTVWMTCTQLIMVLTYLLFAS 174
           G  +TTMLL +FSF NF+GRLGGGA+SEHF+RSKT+PRT+WMTCTQ+IMV+TYLLFAS
Sbjct: 381 GVHNTTMLLCLFSFCNFLGRLGGGAVSEHFLRSKTIPRTIWMTCTQVIMVITYLLFAS 438


>emb|CBI25573.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  192 bits (487), Expect = 1e-46
 Identities = 90/110 (81%), Positives = 102/110 (92%)
 Frame = +2

Query: 302 VMVPTASELFGLKHFGVIYNFMLLGNPLGALIFSGGLAGYVYDKEAAKQQGLNLLSSSVS 481
           +MVPT SELFGLKHFG+ YNFM LGNPLGA +FSG LAG+VYD EAAKQQG+NLL+SSVS
Sbjct: 400 IMVPTVSELFGLKHFGIFYNFMSLGNPLGAFLFSGLLAGFVYDNEAAKQQGMNLLNSSVS 459

Query: 482 CLGPNCFRLTFLVLAGLCVLGSFLSVILTMRLKPVYQMLYSGGSFRLPQS 631
           CLGPNCFRLTFLVLAG+C +GS LS+ILTMR++PVYQMLYSGGSFRLPQ+
Sbjct: 460 CLGPNCFRLTFLVLAGVCGVGSILSIILTMRIRPVYQMLYSGGSFRLPQN 509



 Score =  100 bits (250), Expect = 4e-19
 Identities = 45/58 (77%), Positives = 54/58 (93%)
 Frame = +1

Query: 1   GSSDTTMLLSIFSFGNFVGRLGGGAISEHFVRSKTVPRTVWMTCTQLIMVLTYLLFAS 174
           G  +TTMLL +FSF NF+GRLGGGA+SEHF+RSKT+PRT+WMTCTQ+IMV+TYLLFAS
Sbjct: 320 GVHNTTMLLCLFSFCNFLGRLGGGAVSEHFLRSKTIPRTIWMTCTQVIMVITYLLFAS 377


>ref|XP_002331009.1| predicted protein [Populus trichocarpa] gi|222872939|gb|EEF10070.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  181 bits (459), Expect = 2e-43
 Identities = 88/111 (79%), Positives = 99/111 (89%), Gaps = 1/111 (0%)
 Frame = +2

Query: 302 VMVPTASELFGLKHFGVIYNFMLLGNPLGALIFSGGLAGYVYDKEAAKQQGLNLLS-SSV 478
           +M+PT SELFGLKHFG+ YNFM LGNPLGA +FSG LAGYVYD EAAKQQ  NLLS SS+
Sbjct: 460 IMIPTVSELFGLKHFGLFYNFMSLGNPLGAFLFSGLLAGYVYDNEAAKQQVPNLLSNSSI 519

Query: 479 SCLGPNCFRLTFLVLAGLCVLGSFLSVILTMRLKPVYQMLYSGGSFRLPQS 631
           SCLGPNCFRLTFLVLAG C LGS LS+ILTMR++PVY+MLY+GGSFRLPQ+
Sbjct: 520 SCLGPNCFRLTFLVLAGACGLGSILSIILTMRIRPVYEMLYAGGSFRLPQT 570



 Score =  102 bits (253), Expect = 2e-19
 Identities = 45/58 (77%), Positives = 54/58 (93%)
 Frame = +1

Query: 1   GSSDTTMLLSIFSFGNFVGRLGGGAISEHFVRSKTVPRTVWMTCTQLIMVLTYLLFAS 174
           G  DTT+LLS+FSF NFVGRLGGG +SEHFVRSKT+PRT+WMTCTQ++M++TYLLFAS
Sbjct: 380 GVHDTTILLSLFSFCNFVGRLGGGIVSEHFVRSKTIPRTIWMTCTQVMMIITYLLFAS 437


>ref|XP_002531448.1| conserved hypothetical protein [Ricinus communis]
           gi|223528941|gb|EEF30935.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 570

 Score =  177 bits (450), Expect = 3e-42
 Identities = 82/111 (73%), Positives = 100/111 (90%), Gaps = 1/111 (0%)
 Frame = +2

Query: 302 VMVPTASELFGLKHFGVIYNFMLLGNPLGALIFSGGLAGYVYDKEAAKQQGLNLL-SSSV 478
           +M+PT SELFGLKHFG+ YNF+ +GNPLGA +FSG LAGY+YD EAAKQQG+NLL  SS+
Sbjct: 457 IMIPTVSELFGLKHFGIFYNFISIGNPLGAFLFSGLLAGYIYDTEAAKQQGMNLLLGSSI 516

Query: 479 SCLGPNCFRLTFLVLAGLCVLGSFLSVILTMRLKPVYQMLYSGGSFRLPQS 631
           +C+GPNCFRLTFLVLAG+C +GS LS+ILTMR+ PVY+MLY+GGSFRLPQ+
Sbjct: 517 ACIGPNCFRLTFLVLAGVCGVGSILSLILTMRIWPVYEMLYAGGSFRLPQT 567



 Score =  101 bits (252), Expect = 2e-19
 Identities = 44/58 (75%), Positives = 53/58 (91%)
 Frame = +1

Query: 1   GSSDTTMLLSIFSFGNFVGRLGGGAISEHFVRSKTVPRTVWMTCTQLIMVLTYLLFAS 174
           G  DTT LLS+FSF NFVGRLGGG +SEHFVRS+T+PRT+WMTCTQ++M++TYLLFAS
Sbjct: 377 GVHDTTTLLSLFSFCNFVGRLGGGTVSEHFVRSRTIPRTIWMTCTQIVMIITYLLFAS 434


>ref|XP_002270754.1| PREDICTED: uncharacterized membrane protein YMR155W [Vitis
           vinifera] gi|297743570|emb|CBI36437.3| unnamed protein
           product [Vitis vinifera]
          Length = 564

 Score =  167 bits (422), Expect = 5e-39
 Identities = 84/110 (76%), Positives = 93/110 (84%)
 Frame = +2

Query: 302 VMVPTASELFGLKHFGVIYNFMLLGNPLGALIFSGGLAGYVYDKEAAKQQGLNLLSSSVS 481
           +MVP ASELFGLKHFGVIYNFMLLGNP+GAL+FSG LAGYVYD EAAKQQ       S +
Sbjct: 458 IMVPCASELFGLKHFGVIYNFMLLGNPIGALLFSGLLAGYVYDFEAAKQQ-------SST 510

Query: 482 CLGPNCFRLTFLVLAGLCVLGSFLSVILTMRLKPVYQMLYSGGSFRLPQS 631
           CLG  CFRLTFLVLAG C LG+ LS+ILT+R+KPVYQMLY+GGSFRLP S
Sbjct: 511 CLGGTCFRLTFLVLAGACGLGTILSIILTIRIKPVYQMLYAGGSFRLPSS 560



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 37/58 (63%), Positives = 53/58 (91%)
 Frame = +1

Query: 1   GSSDTTMLLSIFSFGNFVGRLGGGAISEHFVRSKTVPRTVWMTCTQLIMVLTYLLFAS 174
           G +DTT+LLS+FSF NF+GRL GG +SE+FVR++T+PRT+WMT +Q++MV+T+LL+AS
Sbjct: 378 GVTDTTILLSLFSFCNFLGRLFGGVVSEYFVRTRTLPRTIWMTFSQVVMVVTFLLYAS 435


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