BLASTX nr result

ID: Coptis23_contig00024878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024878
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520882.1| conserved hypothetical protein [Ricinus comm...   188   2e-45
emb|CBI25355.3| unnamed protein product [Vitis vinifera]              181   4e-43
ref|XP_002275231.1| PREDICTED: uncharacterized protein LOC100267...   175   2e-41
ref|XP_002325486.1| predicted protein [Populus trichocarpa] gi|2...   174   4e-41
ref|XP_004146473.1| PREDICTED: uncharacterized protein LOC101218...   157   3e-36

>ref|XP_002520882.1| conserved hypothetical protein [Ricinus communis]
            gi|223540013|gb|EEF41591.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 593

 Score =  188 bits (478), Expect = 2e-45
 Identities = 131/304 (43%), Positives = 172/304 (56%), Gaps = 42/304 (13%)
 Frame = -1

Query: 1063 VHSIIEALVKSEKRE----------------------IDSQSALMGQSK-IGIKEVRDGK 953
            VHSIIEALV+SEK E                      IDS    +  S+ IG   +  G 
Sbjct: 290  VHSIIEALVRSEKVENGHVETKQETCVKTATKEISNMIDSGIHRLNFSQGIGGSSILSGS 349

Query: 952  KYLEGQK--GGFGDLDV---------AAEWTY---GDTYGASQFTSDQKDEKLMAY-NKG 818
            K + G    GG GD  +         A+  T+   GDT      TS +  E+   + N+ 
Sbjct: 350  KQIGGYHILGGEGDFSMIDKVSGKNSASHSTHVLDGDTIALKLSTSTKASEESSTFSNEE 409

Query: 817  PEDPTDISFLSVQAANVSSQWLELLCQDINNRLSALRRSKKRVRAVIHKELPSLLSKSVA 638
              + T IS LSV+AA+V+SQWLELL QDI  RLSALRRSKKRV AVI  ELP L+SK   
Sbjct: 410  STNGTSISSLSVRAASVASQWLELLHQDIKGRLSALRRSKKRVGAVIKTELPFLISKEFP 469

Query: 637  PKQENGIHSRQSSTALFSDSTTSDLHGKRWVTLFHQMENKLLEEERHLVSSLQQMKEMQV 458
              QEN  +  + S+   S++T S +H  RW TLFHQM+  L EEE+ L S L Q+KEMQ+
Sbjct: 470  SNQENDPYIMKHSSDGLSNNTISAMHQARWTTLFHQMDKALSEEEKQLESWLNQVKEMQL 529

Query: 457  HCEWGLQCVKQNGL----QLDKSGNASGSKEAENREKELAIRAAAASIYSTSNFIMPRDG 290
            HC+ GLQ    N +    Q + S N +   +A++ E+ELA+RAAAASIYST + +M ++ 
Sbjct: 530  HCDQGLQNFLWNPMFGFQQQETSENYTRIGKADSTERELAVRAAAASIYSTCSLLMSKEN 589

Query: 289  ISCF 278
            +SCF
Sbjct: 590  VSCF 593


>emb|CBI25355.3| unnamed protein product [Vitis vinifera]
          Length = 559

 Score =  181 bits (458), Expect = 4e-43
 Identities = 123/298 (41%), Positives = 159/298 (53%), Gaps = 36/298 (12%)
 Frame = -1

Query: 1063 VHSIIEALVKSEKREID-SQSALMGQSKIGIKEVRDGKKYLEG----------------- 938
            VHSIIEALV+SE+ E   + S     SK G KE+ D KK  E                  
Sbjct: 271  VHSIIEALVRSEQLENGHAGSKQASHSKSGTKEISDEKKDPENIIPLNPSNNMPANLQIR 330

Query: 937  ---------------QKGGFGDLDVAAEWTYGDTYGASQFTSDQKDEKLMAYNKGPEDPT 803
                            KGG  ++ +A + +   T  +   +S   DE        P +  
Sbjct: 331  GNPMLVNKSMSLSSEDKGGDDEI-LALKLSSSQTKASENISSLSNDE--------PMNLN 381

Query: 802  DISFLSVQAANVSSQWLELLCQDINNRLSALRRSKKRVRAVIHKELPSLLSKSVAPKQEN 623
             ++ LSV+AA V+SQWLELL QDI  RL+ALRRSKKRVRAVIH ELP L+SK     QEN
Sbjct: 382  SVTSLSVKAATVASQWLELLHQDIKGRLAALRRSKKRVRAVIHTELPFLISKEFPSNQEN 441

Query: 622  GIHSRQSSTALFSDSTTSDLHGKRWVTLFHQMENKLLEEERHLVSSLQQMKEMQVHCEWG 443
                 + S A  S+   +++H  RW  LF QM+  L EEE+ L S L Q+KEMQ+HCE G
Sbjct: 442  NSSVSKDSAAECSNIAVAEMHQARWSALFDQMDKSLFEEEKQLESWLNQVKEMQMHCERG 501

Query: 442  LQCVKQNGLQLDKSG---NASGSKEAENREKELAIRAAAASIYSTSNFIMPRDGISCF 278
            LQ  + N       G   N    +  ++ E+ELAIRAAAASIYST NF++  + +SCF
Sbjct: 502  LQHFQWNLPHWQHPGTIINDPRPQMVDDSERELAIRAAAASIYSTCNFLLSMENVSCF 559


>ref|XP_002275231.1| PREDICTED: uncharacterized protein LOC100267305 [Vitis vinifera]
          Length = 616

 Score =  175 bits (443), Expect = 2e-41
 Identities = 128/333 (38%), Positives = 159/333 (47%), Gaps = 71/333 (21%)
 Frame = -1

Query: 1063 VHSIIEALVKSEKREID-SQSALMGQSKIGIKEVRDGKKYLEG----------------- 938
            VHSIIEALV+SE+ E   + S     SK G KE+ D KK  E                  
Sbjct: 284  VHSIIEALVRSEQLENGHAGSKQASHSKSGTKEISDEKKDPENVNVLGKTPLYPSHEDGP 343

Query: 937  ----------------------------------QKGGFGDLDVAAEWTYGDTYGASQFT 860
                                               KGG GD  +        T  AS  T
Sbjct: 344  TKIIPLNPSNNMPANLQIRGNPMLVNKSMSLSSEDKGGDGDSRMIERRLVARTSCASSST 403

Query: 859  SDQKDEKLMAY----------------NKGPEDPTDISFLSVQAANVSSQWLELLCQDIN 728
               +DE L                   N  P +   ++ LSV+AA V+SQWLELL QDI 
Sbjct: 404  PTNEDEILALKLSSSQTKASENISSLSNDEPMNLNSVTSLSVKAATVASQWLELLHQDIK 463

Query: 727  NRLSALRRSKKRVRAVIHKELPSLLSKSVAPKQENGIHSRQSSTALFSDSTTSDLHGKRW 548
             RL+ALRRSKKRVRAVIH ELP L+SK     QEN     + S A  S+   +++H  RW
Sbjct: 464  GRLAALRRSKKRVRAVIHTELPFLISKEFPSNQENNSSVSKDSAAECSNIAVAEMHQARW 523

Query: 547  VTLFHQMENKLLEEERHLVSSLQQMKEMQVHCEWGLQCVKQNGLQLDKSG---NASGSKE 377
              LF QM+  L EEE+ L S L Q+KEMQ+HCE GLQ  + N       G   N    + 
Sbjct: 524  SALFDQMDKSLFEEEKQLESWLNQVKEMQMHCERGLQHFQWNLPHWQHPGTIINDPRPQM 583

Query: 376  AENREKELAIRAAAASIYSTSNFIMPRDGISCF 278
             ++ E+ELAIRAAAASIYST NF++  + +SCF
Sbjct: 584  VDDSERELAIRAAAASIYSTCNFLLSMENVSCF 616


>ref|XP_002325486.1| predicted protein [Populus trichocarpa] gi|222862361|gb|EEE99867.1|
            predicted protein [Populus trichocarpa]
          Length = 582

 Score =  174 bits (440), Expect = 4e-41
 Identities = 114/298 (38%), Positives = 165/298 (55%), Gaps = 36/298 (12%)
 Frame = -1

Query: 1063 VHSIIEALVKSEKREIDSQSALMGQSKIGIKEVRD----------------------GKK 950
            VHSIIEALV+SEK E     +     K G KE                         G K
Sbjct: 290  VHSIIEALVRSEKLENGCLESKQAYLKSGTKENNSMSDSGIHRLSFSHGNGSSTSLFGSK 349

Query: 949  YLEGQ--KGGFGD---LDVAAEWTYGDTYGASQ---------FTSDQKDEKLMAYNKGPE 812
               G     G GD   +D+  +  +     AS+          +++  +E     N+   
Sbjct: 350  QTRGYPISNGEGDSSMVDMVHDRNFVSHSAASENDGLTLKLSSSTNALEESRTVLNEESA 409

Query: 811  DPTDISFLSVQAANVSSQWLELLCQDINNRLSALRRSKKRVRAVIHKELPSLLSKSVAPK 632
            +   +S LSV+AA VSSQWLELL QDI  R++ALRRS+KRVRAVI  ELP L+SK  +  
Sbjct: 410  NNASVSCLSVKAATVSSQWLELLHQDIRGRIAALRRSRKRVRAVITTELPFLISKEFSAI 469

Query: 631  QENGIHSRQSSTALFSDSTTSDLHGKRWVTLFHQMENKLLEEERHLVSSLQQMKEMQVHC 452
            + +G ++ +SS+ + S++ T+ +H  RW  LF Q+++ L EEE+ L + L Q+KEMQVHC
Sbjct: 470  EVDGAYTMKSSSEVVSNNATAAMHQARWRALFDQLDSALSEEEKQLETWLSQVKEMQVHC 529

Query: 451  EWGLQCVKQNGLQLDKSGNASGSKEAENREKELAIRAAAASIYSTSNFIMPRDGISCF 278
            + GLQ +  N +          +++A++ +KELA+RAAAASIYST NF+  ++ +SCF
Sbjct: 530  DQGLQHLHYNAIL-----GYPRTEKADSSQKELAVRAAAASIYSTCNFLSSKENVSCF 582


>ref|XP_004146473.1| PREDICTED: uncharacterized protein LOC101218481 [Cucumis sativus]
          Length = 607

 Score =  157 bits (398), Expect = 3e-36
 Identities = 110/313 (35%), Positives = 156/313 (49%), Gaps = 51/313 (16%)
 Frame = -1

Query: 1063 VHSIIEALVKSEKRE-------IDSQSALMGQSKIGIKEVRDGKKYLEGQKGGFGDLD-- 911
            VHSIIEA+V+SEK+E       ++ + A    +K  ++   D    + G   G+G  +  
Sbjct: 296  VHSIIEAIVRSEKQENERIANKLEKRHAAKAGAKRDLENTHDPDINVYGSSQGYGSSNNI 355

Query: 910  --------------------------VAAEWTYGDTYGASQFTSDQKDEKLMAY------ 827
                                      +  +   G  Y +   T++ K+   +        
Sbjct: 356  SAVRQKRGCSLTRSLITEAEVVDRGQIMLDRATGKNYASQLNTTNDKETLALELSSSHAV 415

Query: 826  --------NKGPEDPTDISFLSVQAANVSSQWLELLCQDINNRLSALRRSKKRVRAVIHK 671
                    N   E+ T IS LS++AA V+SQWL+L+ QDI  RLSALRRSKKRVRAVI  
Sbjct: 416  SENACPVSNDEEENLTCISSLSLKAATVASQWLDLIHQDIKGRLSALRRSKKRVRAVIST 475

Query: 670  ELPSLLSKSVAPKQENGIHSRQSSTALFSDSTTSDLHGKRWVTLFHQMENKLLEEERHLV 491
            ELP L+SK     +EN     +SS    S  + +D+H  RW  LF QM+  L EEE+ L 
Sbjct: 476  ELPFLISKEFPSNEENDPFVSKSSQEESSVVSLADIHQARWTKLFDQMDKALAEEEKQLE 535

Query: 490  SSLQQMKEMQVHCEWGLQCVKQNGL--QLDKSGNASGSKEAENREKELAIRAAAASIYST 317
            S L Q+KEMQ+HC+ GL   + N          N   +++  + E+ LA+ AAAASIYST
Sbjct: 536  SWLNQVKEMQIHCDQGLSHAQSNAAFGSQQLGENDLRTRKMNSTERALAVGAAAASIYST 595

Query: 316  SNFIMPRDGISCF 278
             NF+   + +SCF
Sbjct: 596  CNFLF-SENVSCF 607


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