BLASTX nr result

ID: Coptis23_contig00024876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024876
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315971.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28
ref|XP_002514520.1| Calmodulin, putative [Ricinus communis] gi|2...   122   4e-26
ref|XP_003631231.1| PREDICTED: probable calcium-binding protein ...   113   1e-23
ref|XP_004173217.1| PREDICTED: probable calcium-binding protein ...   112   2e-23
ref|XP_004138337.1| PREDICTED: probable calcium-binding protein ...   112   2e-23

>ref|XP_002315971.1| predicted protein [Populus trichocarpa] gi|222865011|gb|EEF02142.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  128 bits (321), Expect = 5e-28
 Identities = 67/92 (72%), Positives = 72/92 (78%)
 Frame = -2

Query: 278 MASLQTDQLQQLKDIFSRFDMDSDXXXXXXXXXXXXXXXXLKPTGDQLHVLLSNMDSNGN 99
           MA+LQTDQL+QLKDIF RFDMDSD                LKPTGDQLHVLLSNMD+NGN
Sbjct: 2   MATLQTDQLKQLKDIFIRFDMDSDGSLTQLELAALLRSLGLKPTGDQLHVLLSNMDANGN 61

Query: 98  GLVEFEELVDVILPDMNEEVLINQEQLLEVFQ 3
           G VEF+ELV  ILPDMNEEVLINQEQLLEVF+
Sbjct: 62  GYVEFDELVSAILPDMNEEVLINQEQLLEVFR 93


>ref|XP_002514520.1| Calmodulin, putative [Ricinus communis] gi|223546124|gb|EEF47626.1|
           Calmodulin, putative [Ricinus communis]
          Length = 158

 Score =  122 bits (305), Expect = 4e-26
 Identities = 63/92 (68%), Positives = 71/92 (77%)
 Frame = -2

Query: 278 MASLQTDQLQQLKDIFSRFDMDSDXXXXXXXXXXXXXXXXLKPTGDQLHVLLSNMDSNGN 99
           MA+LQ DQL+QLKDIF RFDMDSD                LKPTGDQL +LLSNMD+NGN
Sbjct: 2   MATLQPDQLKQLKDIFMRFDMDSDGSLTQLELAALLRSLGLKPTGDQLQILLSNMDANGN 61

Query: 98  GLVEFEELVDVILPDMNEEVLINQEQLLEVFQ 3
           G VEF+ELV+ ILPDMNE+VLINQEQLLEVF+
Sbjct: 62  GYVEFDELVNAILPDMNEDVLINQEQLLEVFR 93


>ref|XP_003631231.1| PREDICTED: probable calcium-binding protein CML16 [Vitis vinifera]
           gi|297737909|emb|CBI27110.3| unnamed protein product
           [Vitis vinifera]
          Length = 162

 Score =  113 bits (283), Expect = 1e-23
 Identities = 56/92 (60%), Positives = 69/92 (75%)
 Frame = -2

Query: 278 MASLQTDQLQQLKDIFSRFDMDSDXXXXXXXXXXXXXXXXLKPTGDQLHVLLSNMDSNGN 99
           M +L++DQL QLKDIF RFDMDSD                LKPTGDQL VLL+NMD+NGN
Sbjct: 3   MDTLKSDQLTQLKDIFKRFDMDSDGSLTQLELAALLRSLGLKPTGDQLQVLLTNMDANGN 62

Query: 98  GLVEFEELVDVILPDMNEEVLINQEQLLEVFQ 3
           G +EF+ELV+ ILPD+NE++L+NQEQL EVF+
Sbjct: 63  GSIEFDELVEAILPDLNEQILVNQEQLTEVFR 94


>ref|XP_004173217.1| PREDICTED: probable calcium-binding protein CML15-like [Cucumis
           sativus]
          Length = 160

 Score =  112 bits (281), Expect = 2e-23
 Identities = 56/92 (60%), Positives = 68/92 (73%)
 Frame = -2

Query: 278 MASLQTDQLQQLKDIFSRFDMDSDXXXXXXXXXXXXXXXXLKPTGDQLHVLLSNMDSNGN 99
           MA+L  +QL QL+DIF+RFDMDSD                LKP+GDQ+HVLL+NMDSNGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDSNGN 60

Query: 98  GLVEFEELVDVILPDMNEEVLINQEQLLEVFQ 3
           G VEF+ELV  I+PD NEEV++NQ QLLEVF+
Sbjct: 61  GSVEFDELVTAIMPDFNEEVMVNQTQLLEVFR 92


>ref|XP_004138337.1| PREDICTED: probable calcium-binding protein CML15-like [Cucumis
           sativus]
          Length = 158

 Score =  112 bits (281), Expect = 2e-23
 Identities = 56/92 (60%), Positives = 68/92 (73%)
 Frame = -2

Query: 278 MASLQTDQLQQLKDIFSRFDMDSDXXXXXXXXXXXXXXXXLKPTGDQLHVLLSNMDSNGN 99
           MA+L  +QL QL+DIF+RFDMDSD                LKP+GDQ+HVLL+NMDSNGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDSNGN 60

Query: 98  GLVEFEELVDVILPDMNEEVLINQEQLLEVFQ 3
           G VEF+ELV  I+PD NEEV++NQ QLLEVF+
Sbjct: 61  GSVEFDELVTAIMPDFNEEVMVNQTQLLEVFR 92


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