BLASTX nr result

ID: Coptis23_contig00024844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024844
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138180.1| PREDICTED: LON peptidase N-terminal domain a...    91   1e-16
emb|CBI15185.3| unnamed protein product [Vitis vinifera]               89   3e-16
tpg|DAA45868.1| TPA: putative RING zinc finger domain superfamil...    88   6e-16
ref|NP_001169658.1| uncharacterized LOC100383539 [Zea mays] gi|2...    88   6e-16
ref|NP_001145128.1| uncharacterized protein LOC100278355 [Zea ma...    88   6e-16

>ref|XP_004138180.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
           2-like [Cucumis sativus]
           gi|449477199|ref|XP_004154958.1| PREDICTED: LON
           peptidase N-terminal domain and RING finger protein
           2-like [Cucumis sativus]
          Length = 487

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
 Frame = -2

Query: 307 DLQEMARGTSELALSWIRRAREAAQTDRRSRRMELLQAEGM-PSPQDPERFSFWLVNIXX 131
           +LQEM    +E A SWIRRA+EA++ D+  +R  LL  E M PS +DPERFSFWL  +  
Sbjct: 393 ELQEMTTNAAEYAQSWIRRAKEASRRDQ-IKRDRLLNVEAMMPSSRDPERFSFWLATLSN 451

Query: 130 XXXXXXXXXXXXRDTKQRLQRGLVYLKSEEQGCRLQ 23
                        DT++R++RGLVYLK+EEQGC++Q
Sbjct: 452 RRPLERLELLRMTDTRERIRRGLVYLKAEEQGCQMQ 487


>emb|CBI15185.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/96 (48%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
 Frame = -2

Query: 307 DLQEMARGTSELALSWIRRAREAAQTDRRSRRMELLQAEGM-PSPQDPERFSFWLVNIXX 131
           DLQEM+   ++ A  WI+RA+EAA  DRR R  EL  AE M P+PQDPE FSFWL  +  
Sbjct: 392 DLQEMSSNAAKYARLWIKRAKEAAWQDRR-RLAELCHAEAMMPTPQDPELFSFWLAGLSN 450

Query: 130 XXXXXXXXXXXXRDTKQRLQRGLVYLKSEEQGCRLQ 23
                       RDTK+R++RGL+Y++  EQGC++Q
Sbjct: 451 RRPPERLDLLYIRDTKERIRRGLIYMRDAEQGCQVQ 486


>tpg|DAA45868.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 458

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/96 (44%), Positives = 61/96 (63%)
 Frame = -2

Query: 310 QDLQEMARGTSELALSWIRRAREAAQTDRRSRRMELLQAEGMPSPQDPERFSFWLVNIXX 131
           ++L E+A G SELA ++IR AR+  +T RR+R ++L   EGMP PQDPE+FSFWL N+  
Sbjct: 366 RELMELANGASELARAYIRHARDTVRTARRTRHLDL---EGMPGPQDPEKFSFWLANLIS 422

Query: 130 XXXXXXXXXXXXRDTKQRLQRGLVYLKSEEQGCRLQ 23
                       RDT++R+   +  L+  EQGCR+Q
Sbjct: 423 LRPSDRLDTLRLRDTRERISSSISLLRDSEQGCRVQ 458


>ref|NP_001169658.1| uncharacterized LOC100383539 [Zea mays] gi|224030665|gb|ACN34408.1|
           unknown [Zea mays] gi|414867312|tpg|DAA45869.1| TPA:
           putative RING zinc finger domain superfamily protein
           [Zea mays]
          Length = 273

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/96 (44%), Positives = 61/96 (63%)
 Frame = -2

Query: 310 QDLQEMARGTSELALSWIRRAREAAQTDRRSRRMELLQAEGMPSPQDPERFSFWLVNIXX 131
           ++L E+A G SELA ++IR AR+  +T RR+R ++L   EGMP PQDPE+FSFWL N+  
Sbjct: 181 RELMELANGASELARAYIRHARDTVRTARRTRHLDL---EGMPGPQDPEKFSFWLANLIS 237

Query: 130 XXXXXXXXXXXXRDTKQRLQRGLVYLKSEEQGCRLQ 23
                       RDT++R+   +  L+  EQGCR+Q
Sbjct: 238 LRPSDRLDTLRLRDTRERISSSISLLRDSEQGCRVQ 273


>ref|NP_001145128.1| uncharacterized protein LOC100278355 [Zea mays]
           gi|195651699|gb|ACG45317.1| hypothetical protein [Zea
           mays]
          Length = 479

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/96 (44%), Positives = 61/96 (63%)
 Frame = -2

Query: 310 QDLQEMARGTSELALSWIRRAREAAQTDRRSRRMELLQAEGMPSPQDPERFSFWLVNIXX 131
           ++L E+A G SELA ++IR AR+  +T RR+R ++L   EGMP PQDPE+FSFWL N+  
Sbjct: 387 RELMELANGASELARAYIRHARDTVRTARRTRHLDL---EGMPGPQDPEKFSFWLANLIS 443

Query: 130 XXXXXXXXXXXXRDTKQRLQRGLVYLKSEEQGCRLQ 23
                       RDT++R+   +  L+  EQGCR+Q
Sbjct: 444 LRPSDRLDTLRLRDTRERISSSISLLRDSEQGCRVQ 479


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