BLASTX nr result

ID: Coptis23_contig00024841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024841
         (1192 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532045.1| PREDICTED: uncharacterized protein LOC100785...   364   2e-98
ref|XP_004155396.1| PREDICTED: uncharacterized protein LOC101230...   360   5e-97
ref|XP_002311873.1| predicted protein [Populus trichocarpa] gi|2...   351   2e-94
gb|ABK94560.1| unknown [Populus trichocarpa]                          351   2e-94
ref|XP_002311797.1| predicted protein [Populus trichocarpa] gi|2...   350   4e-94

>ref|XP_003532045.1| PREDICTED: uncharacterized protein LOC100785006 [Glycine max]
          Length = 496

 Score =  364 bits (935), Expect = 2e-98
 Identities = 186/315 (59%), Positives = 226/315 (71%), Gaps = 17/315 (5%)
 Frame = -3

Query: 971  KDLSFTYISSFCNTTSVKKLMEFFKNAKVIRLRSYHDKYLLAEDDEDYVCQDRNGSSRNA 792
            K +  T  S+    TS++  ME F  AK +RLRS+HDKYLLA++DE+ V QDRNGSSRNA
Sbjct: 182  KSMLKTTSSNTSGATSIRSGMELFHRAKAVRLRSHHDKYLLADEDEESVTQDRNGSSRNA 241

Query: 791  RWTVEFVDGSENVIRLNSCYGKYLTASTIPFLLGVTGKKVLQTTPRRLDSSIEWEPIREG 612
            +WTVE +   +N+IRL SCYGKYLTAS  P LLGVTG+KV+Q+ PRRLDSS+EWEP+R+G
Sbjct: 242  KWTVELIPEFDNIIRLKSCYGKYLTASNQPLLLGVTGRKVVQSLPRRLDSSVEWEPVRDG 301

Query: 611  MQVKLKTRYGDFLRANGGVPPWRNSITHDIPHRSAHQDWILWDVDIIQI----------- 465
             QVKLKTRYG+FLRANGGVPPWRNS+THDIPHR+A QDWILWDVD+++I           
Sbjct: 302  AQVKLKTRYGNFLRANGGVPPWRNSVTHDIPHRTATQDWILWDVDVLEIHVVSPAPPPIP 361

Query: 464  QSD----XXXXXXXXXXXXPTLSRVESSDSLV-CPPPKVDGRTIYYRVADDNGNV-DEGA 303
             SD                 T SR ES+DS V  PP K++GRTIYY VA+DNG+V DE  
Sbjct: 362  HSDSLDFESNTPSAVNIKSTTFSRQESTDSNVGSPPKKMEGRTIYYHVAEDNGDVDDENV 421

Query: 302  EEVSLHFKGNGVEELTRKLEEETGLEDLIVCTRSPISGSLYPIRLHLPPYNTTMHXXXXX 123
            +  SL+FKGNGVE+L RK EEETGLE +IVCTRSP++G LYP+RL LPP N TM      
Sbjct: 422  QGYSLNFKGNGVEQLARKFEEETGLEGVIVCTRSPLNGKLYPLRLQLPPNNVTMQVVLVL 481

Query: 122  XXXXXXRDFEKSGLL 78
                  R+FE+ G+L
Sbjct: 482  PSSKVAREFEEQGIL 496



 Score =  144 bits (363), Expect = 4e-32
 Identities = 72/149 (48%), Positives = 95/149 (63%), Gaps = 1/149 (0%)
 Frame = -3

Query: 911 MEFFKNAKVIRLRSYHDKYLLAEDDEDYVCQDRNGSSRNARWTVEFVDGSENVIRLNSCY 732
           ME F  AK ++LRS+  KYL+A  DED + Q + GS++ A W +E ++G  + +RL S  
Sbjct: 1   MEHFNKAKAVKLRSHLGKYLIA--DEDKLRQSKRGSTKKAIWEIELINGKNHHVRLKSSN 58

Query: 731 GKYLTASTIPFLLGVTGKKV-LQTTPRRLDSSIEWEPIREGMQVKLKTRYGDFLRANGGV 555
           G+YLTA+  PFLLG+TG KV L    +  D   EWEPI EG  VKL++  G +LR NGG 
Sbjct: 59  GRYLTATDAPFLLGMTGNKVVLANFDKGTDWKFEWEPITEGFHVKLRSWCGKYLRGNGGT 118

Query: 554 PPWRNSITHDIPHRSAHQDWILWDVDIIQ 468
            PWRNS+THD P  S    WILW  + +Q
Sbjct: 119 VPWRNSVTHDDPASSVTHTWILWASEPVQ 147


>ref|XP_004155396.1| PREDICTED: uncharacterized protein LOC101230181 [Cucumis sativus]
          Length = 863

 Score =  360 bits (923), Expect = 5e-97
 Identities = 183/302 (60%), Positives = 223/302 (73%), Gaps = 19/302 (6%)
 Frame = -3

Query: 926  SVKKLMEFFKNAKVIRLRSYHDKYLLAEDDEDYVCQDRNGSSRNARWTVEFVDG--SENV 753
            S++  M+FF+NAK +RLRS+HDKYL+A+DD+D V QDRNGSS+ ARW+VEFV G  SE+ 
Sbjct: 562  SLRSHMDFFRNAKTVRLRSHHDKYLVADDDQDTVNQDRNGSSKTARWSVEFVSGANSESF 621

Query: 752  IRLNSCYGKYLTASTIPFLLGVTGKKVLQTTPRRLDSSIEWEPIREGMQVKLKTRYGDFL 573
            IRL SCYGKYLTAS  PFLLG+TG+KVLQT PRRLDSS+EWEP+REG QVK KTRYG+FL
Sbjct: 622  IRLKSCYGKYLTASNQPFLLGMTGRKVLQTLPRRLDSSVEWEPVREGSQVKFKTRYGNFL 681

Query: 572  RANGGVPPWRNSITHDIPHRSAHQDWILWDVDIIQIQ---------------SDXXXXXX 438
            RANGG+PPWRNS+THDIP+R+A QDWILWD+D+++IQ                D      
Sbjct: 682  RANGGLPPWRNSVTHDIPNRTATQDWILWDIDVVEIQVSMNHRAPTIDHQDSLDFNPSSP 741

Query: 437  XXXXXXPT-LSRVESSDSLVCPPPKVDGRTIYYRVADDNGNVDEG-AEEVSLHFKGNGVE 264
                  PT  SR+ES+DS V  PPK +GRTIYY VAD++G+VDE   E  S  FKGNGVE
Sbjct: 742  PSTSGKPTHYSRLESTDSTVSVPPKSEGRTIYYHVADESGDVDEDTVEGSSFTFKGNGVE 801

Query: 263  ELTRKLEEETGLEDLIVCTRSPISGSLYPIRLHLPPYNTTMHXXXXXXXXXXXRDFEKSG 84
            ELTRKL+EETG+E +IVCTR+P++G+LYP+RL LPP N  MH           +D  K  
Sbjct: 802  ELTRKLKEETGIEGIIVCTRNPLNGNLYPLRLQLPPNNAIMHVVAVPETSKLGKDLGKQR 861

Query: 83   LL 78
            LL
Sbjct: 862  LL 863



 Score =  316 bits (809), Expect = 8e-84
 Identities = 163/306 (53%), Positives = 212/306 (69%), Gaps = 20/306 (6%)
 Frame = -3

Query: 995  TPFLIKPIKDLSFTYISSFCNTTSVKKLMEFFKNAKVIRLRSYHDKYLLAEDDEDYVCQD 816
            +P   K ++  S   I SF +  +++   +FF N K +RLRS+H+KYL+A+DD+D V Q+
Sbjct: 179  SPSTPKSVRRSSTLQIKSFSDN-NLRSNSDFFHNVKTVRLRSHHNKYLVADDDQDSVNQE 237

Query: 815  RNGSSRNARWTVEFVDGSEN--VIRLNSCYGKYLTASTIPFLLGVTGKKVLQTTPRRLDS 642
            R+GSS++A W+VEF     +   IRL SCYGKYLTAS  PFLLG+TG+KVLQT PRRLDS
Sbjct: 238  RSGSSKSAHWSVEFPFSKRSNFTIRLKSCYGKYLTASNQPFLLGMTGRKVLQTLPRRLDS 297

Query: 641  SIEWEPIREGMQVKLKTRYGDFLRANGGVPPWRNSITHDIPHRSAHQDWILWDVDIIQIQ 462
            SIEWEP+REG QVK KT  G+FLRANGG+P WR+S+THD P ++A QDWILWD+D+++IQ
Sbjct: 298  SIEWEPVREGAQVKFKTCNGNFLRANGGLPSWRDSVTHDNPSQTAIQDWILWDIDVVEIQ 357

Query: 461  SDXXXXXXXXXXXXPTL-----------------SRVESSDSLVCPPPKVDGRTIYYRVA 333
                           +L                 SR+E ++S V  PPK +GRTIYY VA
Sbjct: 358  VQFLSHRAPTIENVDSLDFNPSSPPSASGKWAHYSRLEYTNSTVSLPPKSEGRTIYYHVA 417

Query: 332  DDNGNVDEG-AEEVSLHFKGNGVEELTRKLEEETGLEDLIVCTRSPISGSLYPIRLHLPP 156
            D++G+VD+   E  S  FKGNGVEELTRKL+EE G E +IVCTR+P++G+LYP+RL LPP
Sbjct: 418  DESGDVDKDIMEGSSFTFKGNGVEELTRKLKEEIGFEGIIVCTRNPLNGNLYPLRLQLPP 477

Query: 155  YNTTMH 138
             N  MH
Sbjct: 478  NNAIMH 483



 Score =  147 bits (371), Expect = 5e-33
 Identities = 74/146 (50%), Positives = 98/146 (67%), Gaps = 1/146 (0%)
 Frame = -3

Query: 911 MEFFKNAKVIRLRSYHDKYLLAEDDEDYVCQDRNGSSRNARWTVEFVDGSENVIRLNSCY 732
           MEFF   K ++LRS+  KYL A DD   V Q  + S+    W +EFV+G  + IRL S +
Sbjct: 1   MEFFTFFKSVKLRSHLRKYLSAADDHQTVRQTSHTSATGTIWAIEFVEGKTDSIRLRSRH 60

Query: 731 GKYLTASTIPFLLGVTGKKVL-QTTPRRLDSSIEWEPIREGMQVKLKTRYGDFLRANGGV 555
           G YL+A+ + FLLG TG+KV+ QT      SS+EWEP+R+G QVKL +  G +LR NG +
Sbjct: 61  GNYLSATDLTFLLGATGRKVICQTKHAAAWSSLEWEPVRDGDQVKLMSWCGSYLRGNGVM 120

Query: 554 PPWRNSITHDIPHRSAHQDWILWDVD 477
           PPWRNS+THD P  S+ + WILWDV+
Sbjct: 121 PPWRNSVTHDEPRFSSTKGWILWDVE 146


>ref|XP_002311873.1| predicted protein [Populus trichocarpa] gi|222851693|gb|EEE89240.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  351 bits (901), Expect = 2e-94
 Identities = 175/300 (58%), Positives = 213/300 (71%), Gaps = 23/300 (7%)
 Frame = -3

Query: 911 MEFFKNAKVIRLRSYHDKYLLAEDDEDYVCQDRNGSSRNARWTVEFVDGSENVIRLNSCY 732
           M+FF  AK +RLRS+HDKYLLAEDDE+ V QDR+GSS+ ARW VE V GS+ +IRL SCY
Sbjct: 1   MDFFHKAKAVRLRSHHDKYLLAEDDEESVIQDRDGSSKTARWIVELVPGSDFIIRLKSCY 60

Query: 731 GKYLTASTIPFLLGVTGKKVLQTTPRRLDSSIEWEPIREGMQVKLKTRYGDFLRANGGVP 552
           GKYLTAS  PFLLG+TG+KVLQT PRRLDSS+EWEP+REG Q+KLKTRYG+FLRANGG+P
Sbjct: 61  GKYLTASNQPFLLGMTGRKVLQTLPRRLDSSVEWEPVREGGQMKLKTRYGNFLRANGGLP 120

Query: 551 PWRNSITHDIPHRSAHQDWILWDVDIIQIQ----------------------SDXXXXXX 438
           PWRNS+THD+PHR++ QDW+LWDVD+++IQ                              
Sbjct: 121 PWRNSVTHDVPHRTSTQDWVLWDVDVLEIQVHQSHTGHAPDLNKIMSHADSLDFESTSPT 180

Query: 437 XXXXXXPTLSRVESSDSLVCPPPKVDGRTIYYRVADDNGNVDEGAE-EVSLHFKGNGVEE 261
                    SR ESSDS V  P K +GRTIYY VAD++G VD+ A    SL+FKGNGV+E
Sbjct: 181 SLSIKSGNFSRQESSDSHVTSPRKSEGRTIYYHVADESGEVDDDATVGYSLNFKGNGVDE 240

Query: 260 LTRKLEEETGLEDLIVCTRSPISGSLYPIRLHLPPYNTTMHXXXXXXXXXXXRDFEKSGL 81
           LT+KL+E+TGLED++VCTRSP++  LYP+RL LPP N  MH           RDF K G+
Sbjct: 241 LTQKLKEDTGLEDIVVCTRSPLNAKLYPLRLQLPPNNADMHVILVQSSSNAARDFAKPGV 300


>gb|ABK94560.1| unknown [Populus trichocarpa]
          Length = 302

 Score =  351 bits (901), Expect = 2e-94
 Identities = 175/300 (58%), Positives = 213/300 (71%), Gaps = 23/300 (7%)
 Frame = -3

Query: 911 MEFFKNAKVIRLRSYHDKYLLAEDDEDYVCQDRNGSSRNARWTVEFVDGSENVIRLNSCY 732
           M+FF  AK +RLRS+HDKYLLAEDDE+ V QDR+GSS+ ARW VE V GS+ +IRL SCY
Sbjct: 1   MDFFHKAKAVRLRSHHDKYLLAEDDEESVIQDRDGSSKTARWIVELVPGSDFIIRLKSCY 60

Query: 731 GKYLTASTIPFLLGVTGKKVLQTTPRRLDSSIEWEPIREGMQVKLKTRYGDFLRANGGVP 552
           GKYLTAS  PFLLG+TG+KVLQT PRRLDSS+EWEP+REG Q+KLKTRYG+FLRANGG+P
Sbjct: 61  GKYLTASNQPFLLGMTGRKVLQTLPRRLDSSVEWEPVREGGQMKLKTRYGNFLRANGGLP 120

Query: 551 PWRNSITHDIPHRSAHQDWILWDVDIIQIQ----------------------SDXXXXXX 438
           PWRNS+THD+PHR++ QDW+LWDVD+++IQ                              
Sbjct: 121 PWRNSVTHDVPHRTSTQDWVLWDVDVLEIQVHQSHTGHAPDLNKIMSHDDSLDFESTSPT 180

Query: 437 XXXXXXPTLSRVESSDSLVCPPPKVDGRTIYYRVADDNGNVDEGAE-EVSLHFKGNGVEE 261
                    SR ESSDS V  P K +GRTIYY VAD++G VD+ A    SL+FKGNGV+E
Sbjct: 181 SLSIKSGNFSRQESSDSHVTSPRKSEGRTIYYHVADESGEVDDDATVGYSLNFKGNGVDE 240

Query: 260 LTRKLEEETGLEDLIVCTRSPISGSLYPIRLHLPPYNTTMHXXXXXXXXXXXRDFEKSGL 81
           LT+KL+E+TGLED++VCTRSP++  LYP+RL LPP N  MH           RDF K G+
Sbjct: 241 LTQKLKEDTGLEDIVVCTRSPLNAKLYPLRLQLPPNNADMHVILVQSSSNAARDFAKPGV 300


>ref|XP_002311797.1| predicted protein [Populus trichocarpa] gi|222851617|gb|EEE89164.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score =  350 bits (898), Expect = 4e-94
 Identities = 177/281 (62%), Positives = 208/281 (74%), Gaps = 23/281 (8%)
 Frame = -3

Query: 911 MEFFKNAKVIRLRSYHDKYLLAEDDEDYVCQDRNGSSRNARWTVEFVDGSENVIRLNSCY 732
           M+FF NAK +RLRS+HDKYLLAE+DED V QDRNGSS+ ARWTVE V GS+++IRL SC 
Sbjct: 1   MDFFLNAKTVRLRSHHDKYLLAEEDEDSVTQDRNGSSKIARWTVEPVPGSDSIIRLKSCN 60

Query: 731 GKYLTASTIPFLLGVTGKKVLQTTPRRLDSSIEWEPIREGMQVKLKTRYGDFLRANGGVP 552
           GKYLTAS  PFLLG+TG+KVLQT PRR DSS+EWEP+REG QVKLKTRYG+FLRANGG+P
Sbjct: 61  GKYLTASNEPFLLGMTGRKVLQTVPRRFDSSVEWEPVREGGQVKLKTRYGNFLRANGGLP 120

Query: 551 PWRNSITHDIPHRSAHQDWILWDVDIIQI------------------QSDXXXXXXXXXX 426
           PWRNS+THDIPHRSA QDWILWDVD+++                   QSD          
Sbjct: 121 PWRNSVTHDIPHRSATQDWILWDVDVVETRALQSPTGHAHYLQKIVSQSDSLDSESTSPP 180

Query: 425 XXPTLS----RVESSDSLVCPPPKVDGRTIYYRVADDNGNVDEGA-EEVSLHFKGNGVEE 261
                S    R  SSDS    P K DGRTIYY VAD++G VD+ A E  SL+FKGNGV+ 
Sbjct: 181 SISIKSGDYLRQGSSDSNASSPRKSDGRTIYYHVADESGEVDDDATERCSLNFKGNGVDG 240

Query: 260 LTRKLEEETGLEDLIVCTRSPISGSLYPIRLHLPPYNTTMH 138
           LT+KL+E+TGLED++VCTRSP++G LYP+RL LPP N  MH
Sbjct: 241 LTQKLKEDTGLEDIVVCTRSPLNGELYPLRLQLPPNNADMH 281


Top