BLASTX nr result
ID: Coptis23_contig00024831
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00024831 (471 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002306106.1| predicted protein [Populus trichocarpa] gi|2... 85 5e-15 ref|XP_002313047.1| predicted protein [Populus trichocarpa] gi|2... 79 4e-13 ref|XP_003631652.1| PREDICTED: uncharacterized protein LOC100853... 77 1e-12 ref|XP_003631653.1| PREDICTED: uncharacterized protein LOC100853... 73 3e-11 ref|XP_002509485.1| conserved hypothetical protein [Ricinus comm... 70 1e-10 >ref|XP_002306106.1| predicted protein [Populus trichocarpa] gi|222849070|gb|EEE86617.1| predicted protein [Populus trichocarpa] Length = 95 Score = 85.1 bits (209), Expect = 5e-15 Identities = 45/65 (69%), Positives = 46/65 (70%) Frame = +3 Query: 54 KSMPSLFPCTKRANPFCTSRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQG 233 KSM S F T TSRI LG VESLMPLHSAIA+ARLKSSIA DSSCWSWLSQG Sbjct: 31 KSMSSPFTSTPTRTILATSRIVSVLGSVESLMPLHSAIANARLKSSIAVDSSCWSWLSQG 90 Query: 234 LVLTL 248 L L Sbjct: 91 LATPL 95 >ref|XP_002313047.1| predicted protein [Populus trichocarpa] gi|222849455|gb|EEE87002.1| predicted protein [Populus trichocarpa] Length = 95 Score = 79.0 bits (193), Expect = 4e-13 Identities = 41/65 (63%), Positives = 45/65 (69%) Frame = +3 Query: 54 KSMPSLFPCTKRANPFCTSRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQG 233 KSM S F T +SR LG VESLMPLH+AIA+ARLKSSIA DSSCWSWLS+G Sbjct: 31 KSMSSPFTSTPTRTILASSRAVSVLGSVESLMPLHNAIANARLKSSIAVDSSCWSWLSRG 90 Query: 234 LVLTL 248 L L Sbjct: 91 LATPL 95 >ref|XP_003631652.1| PREDICTED: uncharacterized protein LOC100853459 isoform 1 [Vitis vinifera] gi|297741456|emb|CBI32587.3| unnamed protein product [Vitis vinifera] Length = 94 Score = 77.0 bits (188), Expect = 1e-12 Identities = 42/65 (64%), Positives = 46/65 (70%) Frame = +3 Query: 54 KSMPSLFPCTKRANPFCTSRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQG 233 K + S F + R P C SRI ALG VESLMPLHSA+ASARLKS IA DS+ WSWLSQG Sbjct: 31 KPLASPFSSSTRPMP-CASRILSALGSVESLMPLHSAVASARLKSFIAVDSTSWSWLSQG 89 Query: 234 LVLTL 248 L L Sbjct: 90 RALPL 94 >ref|XP_003631653.1| PREDICTED: uncharacterized protein LOC100853459 isoform 2 [Vitis vinifera] Length = 94 Score = 72.8 bits (177), Expect = 3e-11 Identities = 39/59 (66%), Positives = 43/59 (72%) Frame = +3 Query: 54 KSMPSLFPCTKRANPFCTSRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQ 230 K + S F + R P C SRI ALG VESLMPLHSA+ASARLKS IA DS+ WSWLSQ Sbjct: 31 KPLASPFSSSTRPMP-CASRILSALGSVESLMPLHSAVASARLKSFIAVDSTSWSWLSQ 88 >ref|XP_002509485.1| conserved hypothetical protein [Ricinus communis] gi|223549384|gb|EEF50872.1| conserved hypothetical protein [Ricinus communis] Length = 98 Score = 70.5 bits (171), Expect = 1e-10 Identities = 35/60 (58%), Positives = 41/60 (68%) Frame = +3 Query: 54 KSMPSLFPCTKRANPFCTSRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQG 233 KS+ S F SR+ LG + SLMPLH+AIA++RLKSSIA DSSCWSWLSQG Sbjct: 31 KSISSAFSSPSTRTIASASRVVSVLGSMVSLMPLHTAIANSRLKSSIAVDSSCWSWLSQG 90