BLASTX nr result

ID: Coptis23_contig00024831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024831
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306106.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002313047.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_003631652.1| PREDICTED: uncharacterized protein LOC100853...    77   1e-12
ref|XP_003631653.1| PREDICTED: uncharacterized protein LOC100853...    73   3e-11
ref|XP_002509485.1| conserved hypothetical protein [Ricinus comm...    70   1e-10

>ref|XP_002306106.1| predicted protein [Populus trichocarpa] gi|222849070|gb|EEE86617.1|
           predicted protein [Populus trichocarpa]
          Length = 95

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/65 (69%), Positives = 46/65 (70%)
 Frame = +3

Query: 54  KSMPSLFPCTKRANPFCTSRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQG 233
           KSM S F  T       TSRI   LG VESLMPLHSAIA+ARLKSSIA DSSCWSWLSQG
Sbjct: 31  KSMSSPFTSTPTRTILATSRIVSVLGSVESLMPLHSAIANARLKSSIAVDSSCWSWLSQG 90

Query: 234 LVLTL 248
           L   L
Sbjct: 91  LATPL 95


>ref|XP_002313047.1| predicted protein [Populus trichocarpa] gi|222849455|gb|EEE87002.1|
           predicted protein [Populus trichocarpa]
          Length = 95

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/65 (63%), Positives = 45/65 (69%)
 Frame = +3

Query: 54  KSMPSLFPCTKRANPFCTSRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQG 233
           KSM S F  T       +SR    LG VESLMPLH+AIA+ARLKSSIA DSSCWSWLS+G
Sbjct: 31  KSMSSPFTSTPTRTILASSRAVSVLGSVESLMPLHNAIANARLKSSIAVDSSCWSWLSRG 90

Query: 234 LVLTL 248
           L   L
Sbjct: 91  LATPL 95


>ref|XP_003631652.1| PREDICTED: uncharacterized protein LOC100853459 isoform 1 [Vitis
           vinifera] gi|297741456|emb|CBI32587.3| unnamed protein
           product [Vitis vinifera]
          Length = 94

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/65 (64%), Positives = 46/65 (70%)
 Frame = +3

Query: 54  KSMPSLFPCTKRANPFCTSRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQG 233
           K + S F  + R  P C SRI  ALG VESLMPLHSA+ASARLKS IA DS+ WSWLSQG
Sbjct: 31  KPLASPFSSSTRPMP-CASRILSALGSVESLMPLHSAVASARLKSFIAVDSTSWSWLSQG 89

Query: 234 LVLTL 248
             L L
Sbjct: 90  RALPL 94


>ref|XP_003631653.1| PREDICTED: uncharacterized protein LOC100853459 isoform 2 [Vitis
           vinifera]
          Length = 94

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/59 (66%), Positives = 43/59 (72%)
 Frame = +3

Query: 54  KSMPSLFPCTKRANPFCTSRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQ 230
           K + S F  + R  P C SRI  ALG VESLMPLHSA+ASARLKS IA DS+ WSWLSQ
Sbjct: 31  KPLASPFSSSTRPMP-CASRILSALGSVESLMPLHSAVASARLKSFIAVDSTSWSWLSQ 88


>ref|XP_002509485.1| conserved hypothetical protein [Ricinus communis]
           gi|223549384|gb|EEF50872.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 98

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/60 (58%), Positives = 41/60 (68%)
 Frame = +3

Query: 54  KSMPSLFPCTKRANPFCTSRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQG 233
           KS+ S F           SR+   LG + SLMPLH+AIA++RLKSSIA DSSCWSWLSQG
Sbjct: 31  KSISSAFSSPSTRTIASASRVVSVLGSMVSLMPLHTAIANSRLKSSIAVDSSCWSWLSQG 90


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