BLASTX nr result

ID: Coptis23_contig00024825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024825
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16552.3| unnamed protein product [Vitis vinifera]              105   3e-21
ref|XP_002283740.1| PREDICTED: LRR receptor-like serine/threonin...   105   3e-21
emb|CAN75789.1| hypothetical protein VITISV_041017 [Vitis vinifera]   105   3e-21
ref|XP_002297619.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002523410.1| serine-threonine protein kinase, plant-type,...   101   6e-20

>emb|CBI16552.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  105 bits (263), Expect = 3e-21
 Identities = 59/109 (54%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
 Frame = +1

Query: 16  LCCPKEQKEALLQFKASLINETDSNSSLETVFGGIESWNSSLDCCQWDLVTCN-PRRSPS 192
           L CP+ QK+ALLQFK+S++    SNSS  +   G+ESWNSS  CCQWD VTC+ P  S S
Sbjct: 21  LSCPEYQKQALLQFKSSILA---SNSSFNSSTFGLESWNSSSSCCQWDQVTCSSPSNSTS 77

Query: 193 RNVVALDLYSFVTSLAPEVVVNSAVLAPLFRITSLTKLDISSNSIQGQL 339
           R V  L L +  T L P   + S VLAPLF+I SL  LDISSN+I G++
Sbjct: 78  RVVTGLYLSALYTMLPPRPQLPSTVLAPLFQIRSLMLLDISSNNIYGEI 126


>ref|XP_002283740.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1
           [Vitis vinifera]
          Length = 814

 Score =  105 bits (263), Expect = 3e-21
 Identities = 59/109 (54%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
 Frame = +1

Query: 16  LCCPKEQKEALLQFKASLINETDSNSSLETVFGGIESWNSSLDCCQWDLVTCN-PRRSPS 192
           L CP+ QK+ALLQFK+S++    SNSS  +   G+ESWNSS  CCQWD VTC+ P  S S
Sbjct: 21  LSCPEYQKQALLQFKSSILA---SNSSFNSSTFGLESWNSSSSCCQWDQVTCSSPSNSTS 77

Query: 193 RNVVALDLYSFVTSLAPEVVVNSAVLAPLFRITSLTKLDISSNSIQGQL 339
           R V  L L +  T L P   + S VLAPLF+I SL  LDISSN+I G++
Sbjct: 78  RVVTGLYLSALYTMLPPRPQLPSTVLAPLFQIRSLMLLDISSNNIYGEI 126


>emb|CAN75789.1| hypothetical protein VITISV_041017 [Vitis vinifera]
          Length = 793

 Score =  105 bits (263), Expect = 3e-21
 Identities = 59/109 (54%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
 Frame = +1

Query: 16  LCCPKEQKEALLQFKASLINETDSNSSLETVFGGIESWNSSLDCCQWDLVTCN-PRRSPS 192
           L CP+ QK+ALLQFK+S++    SNSS  +   G+ESWNSS  CCQWD VTC+ P  S S
Sbjct: 21  LSCPEYQKQALLQFKSSILA---SNSSFNSSTFGLESWNSSSSCCQWDQVTCSSPSNSTS 77

Query: 193 RNVVALDLYSFVTSLAPEVVVNSAVLAPLFRITSLTKLDISSNSIQGQL 339
           R V  L L +  T L P   + S VLAPLF+I SL  LDISSN+I G++
Sbjct: 78  RVVTGLYLSALYTMLPPRPQLPSTVLAPLFQIRSLMLLDISSNNIYGEI 126


>ref|XP_002297619.1| predicted protein [Populus trichocarpa] gi|222844877|gb|EEE82424.1|
           predicted protein [Populus trichocarpa]
          Length = 805

 Score =  103 bits (258), Expect = 1e-20
 Identities = 59/113 (52%), Positives = 75/113 (66%)
 Frame = +1

Query: 4   FYTSLCCPKEQKEALLQFKASLINETDSNSSLETVFGGIESWNSSLDCCQWDLVTCNPRR 183
           F TSLCCP +QK ALL FK+SL++    NSS +     ++SW+ S DCC WD+VTC+  R
Sbjct: 15  FSTSLCCPDDQKLALLHFKSSLLDSI--NSSTQYSLSSLDSWDDSSDCCHWDMVTCS-SR 71

Query: 184 SPSRNVVALDLYSFVTSLAPEVVVNSAVLAPLFRITSLTKLDISSNSIQGQLP 342
           S SR VVAL L S V +  P + + S VL+PL  I SL  LDISSN I G++P
Sbjct: 72  SNSRKVVALHLDSLVLAEQP-IPIPSMVLSPLSLIKSLMLLDISSNYIVGEIP 123


>ref|XP_002523410.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223537360|gb|EEF38989.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 816

 Score =  101 bits (252), Expect = 6e-20
 Identities = 56/116 (48%), Positives = 78/116 (67%), Gaps = 3/116 (2%)
 Frame = +1

Query: 4   FYTSLCCPKEQKEALLQFKASLI---NETDSNSSLETVFGGIESWNSSLDCCQWDLVTCN 174
           F  +L CP + K+ALLQFK+ +I   N T S+SS +    G++SW S+ DCCQW++V C 
Sbjct: 18  FTPTLSCPDDHKQALLQFKSLVIRTLNSTSSSSSSDYSLFGLDSWTSASDCCQWEMVGCK 77

Query: 175 PRRSPSRNVVALDLYSFVTSLAPEVVVNSAVLAPLFRITSLTKLDISSNSIQGQLP 342
              S SR+V +L + S V S+ P + + S+VL+PLFRI SL  LDISSN I G++P
Sbjct: 78  -ANSTSRSVTSLSVSSLVGSVNP-IPIPSSVLSPLFRIRSLMFLDISSNHILGEIP 131


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