BLASTX nr result

ID: Coptis23_contig00024814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024814
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277177.2| PREDICTED: LOW QUALITY PROTEIN: endoglucanas...   148   5e-34
emb|CBI27137.3| unnamed protein product [Vitis vinifera]              148   5e-34
gb|AFK45497.1| unknown [Lotus japonicus]                              147   9e-34
ref|XP_002310080.1| glycosyl hydrolase family 9 [Populus trichoc...   147   1e-33
gb|AFZ78644.1| korrigan [Populus tomentosa]                           144   7e-33

>ref|XP_002277177.2| PREDICTED: LOW QUALITY PROTEIN: endoglucanase 5-like [Vitis
           vinifera]
          Length = 611

 Score =  148 bits (374), Expect = 5e-34
 Identities = 69/93 (74%), Positives = 79/93 (84%)
 Frame = -1

Query: 562 VAFLHSITDTWTVGQRTYYRHKVNIKNISLKPITQLTLLIENLSGSLWGLSPTLEKNTYE 383
           V F+H IT+TWT+G+ TYYRHKV IKN S KPIT L L IENLSG+LWGL+P  EKNTYE
Sbjct: 519 VEFIHFITNTWTIGRTTYYRHKVIIKNKSQKPITDLKLAIENLSGTLWGLNPCQEKNTYE 578

Query: 382 FPQWLKTLKPGSQCSFVYVQGGPQAKVSVISYN 284
            PQW+K L+PGSQ SFVYVQGGPQAKVSV+SY+
Sbjct: 579 LPQWMKVLQPGSQSSFVYVQGGPQAKVSVLSYH 611


>emb|CBI27137.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  148 bits (374), Expect = 5e-34
 Identities = 69/93 (74%), Positives = 79/93 (84%)
 Frame = -1

Query: 562 VAFLHSITDTWTVGQRTYYRHKVNIKNISLKPITQLTLLIENLSGSLWGLSPTLEKNTYE 383
           V F+H IT+TWT+G+ TYYRHKV IKN S KPIT L L IENLSG+LWGL+P  EKNTYE
Sbjct: 523 VEFIHFITNTWTIGRTTYYRHKVIIKNKSQKPITDLKLAIENLSGTLWGLNPCQEKNTYE 582

Query: 382 FPQWLKTLKPGSQCSFVYVQGGPQAKVSVISYN 284
            PQW+K L+PGSQ SFVYVQGGPQAKVSV+SY+
Sbjct: 583 LPQWMKVLQPGSQSSFVYVQGGPQAKVSVLSYH 615


>gb|AFK45497.1| unknown [Lotus japonicus]
          Length = 644

 Score =  147 bits (372), Expect = 9e-34
 Identities = 66/92 (71%), Positives = 79/92 (85%)
 Frame = -1

Query: 562 VAFLHSITDTWTVGQRTYYRHKVNIKNISLKPITQLTLLIENLSGSLWGLSPTLEKNTYE 383
           V FLHSIT +WTVG+ TYYRH+V IKNIS KPI+ L L+I+NLSGSLWGL+PT EKN YE
Sbjct: 552 VQFLHSITSSWTVGESTYYRHRVVIKNISQKPISDLKLMIQNLSGSLWGLTPTNEKNIYE 611

Query: 382 FPQWLKTLKPGSQCSFVYVQGGPQAKVSVISY 287
            PQWL  L+PGS+C FVYVQGGPQAK+S++S+
Sbjct: 612 LPQWLNVLQPGSECIFVYVQGGPQAKISILSF 643


>ref|XP_002310080.1| glycosyl hydrolase family 9 [Populus trichocarpa]
           gi|222852983|gb|EEE90530.1| glycosyl hydrolase family 9
           [Populus trichocarpa] gi|347466591|gb|AEO97208.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
           gi|347466645|gb|AEO97235.1| endo-1,4-beta-glucanase
           [Populus trichocarpa]
          Length = 611

 Score =  147 bits (370), Expect = 1e-33
 Identities = 69/93 (74%), Positives = 78/93 (83%)
 Frame = -1

Query: 562 VAFLHSITDTWTVGQRTYYRHKVNIKNISLKPITQLTLLIENLSGSLWGLSPTLEKNTYE 383
           V FLHSIT TWTVG  TYYRHKV IKN S KPI  L L+IE+LSGS+WGL+PT ++NTYE
Sbjct: 519 VEFLHSITKTWTVGPTTYYRHKVIIKNKSEKPIKDLKLVIEDLSGSIWGLNPTQQRNTYE 578

Query: 382 FPQWLKTLKPGSQCSFVYVQGGPQAKVSVISYN 284
            PQW K L+PGS+CSFVYVQGGPQAKV+V SYN
Sbjct: 579 LPQWQKVLQPGSECSFVYVQGGPQAKVTVQSYN 611


>gb|AFZ78644.1| korrigan [Populus tomentosa]
          Length = 611

 Score =  144 bits (364), Expect = 7e-33
 Identities = 67/93 (72%), Positives = 77/93 (82%)
 Frame = -1

Query: 562 VAFLHSITDTWTVGQRTYYRHKVNIKNISLKPITQLTLLIENLSGSLWGLSPTLEKNTYE 383
           V FLHSIT TWTVG  TYYRH+V IKN S KPI  L L++E LSGS+WGL+PT ++NTYE
Sbjct: 519 VEFLHSITKTWTVGPTTYYRHRVIIKNKSEKPIKDLKLVVEGLSGSVWGLNPTQQRNTYE 578

Query: 382 FPQWLKTLKPGSQCSFVYVQGGPQAKVSVISYN 284
            PQW K L+PGS+CSFVYVQGGPQAKV+V SYN
Sbjct: 579 LPQWQKVLQPGSECSFVYVQGGPQAKVTVQSYN 611


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