BLASTX nr result
ID: Coptis23_contig00024814
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00024814 (562 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277177.2| PREDICTED: LOW QUALITY PROTEIN: endoglucanas... 148 5e-34 emb|CBI27137.3| unnamed protein product [Vitis vinifera] 148 5e-34 gb|AFK45497.1| unknown [Lotus japonicus] 147 9e-34 ref|XP_002310080.1| glycosyl hydrolase family 9 [Populus trichoc... 147 1e-33 gb|AFZ78644.1| korrigan [Populus tomentosa] 144 7e-33 >ref|XP_002277177.2| PREDICTED: LOW QUALITY PROTEIN: endoglucanase 5-like [Vitis vinifera] Length = 611 Score = 148 bits (374), Expect = 5e-34 Identities = 69/93 (74%), Positives = 79/93 (84%) Frame = -1 Query: 562 VAFLHSITDTWTVGQRTYYRHKVNIKNISLKPITQLTLLIENLSGSLWGLSPTLEKNTYE 383 V F+H IT+TWT+G+ TYYRHKV IKN S KPIT L L IENLSG+LWGL+P EKNTYE Sbjct: 519 VEFIHFITNTWTIGRTTYYRHKVIIKNKSQKPITDLKLAIENLSGTLWGLNPCQEKNTYE 578 Query: 382 FPQWLKTLKPGSQCSFVYVQGGPQAKVSVISYN 284 PQW+K L+PGSQ SFVYVQGGPQAKVSV+SY+ Sbjct: 579 LPQWMKVLQPGSQSSFVYVQGGPQAKVSVLSYH 611 >emb|CBI27137.3| unnamed protein product [Vitis vinifera] Length = 615 Score = 148 bits (374), Expect = 5e-34 Identities = 69/93 (74%), Positives = 79/93 (84%) Frame = -1 Query: 562 VAFLHSITDTWTVGQRTYYRHKVNIKNISLKPITQLTLLIENLSGSLWGLSPTLEKNTYE 383 V F+H IT+TWT+G+ TYYRHKV IKN S KPIT L L IENLSG+LWGL+P EKNTYE Sbjct: 523 VEFIHFITNTWTIGRTTYYRHKVIIKNKSQKPITDLKLAIENLSGTLWGLNPCQEKNTYE 582 Query: 382 FPQWLKTLKPGSQCSFVYVQGGPQAKVSVISYN 284 PQW+K L+PGSQ SFVYVQGGPQAKVSV+SY+ Sbjct: 583 LPQWMKVLQPGSQSSFVYVQGGPQAKVSVLSYH 615 >gb|AFK45497.1| unknown [Lotus japonicus] Length = 644 Score = 147 bits (372), Expect = 9e-34 Identities = 66/92 (71%), Positives = 79/92 (85%) Frame = -1 Query: 562 VAFLHSITDTWTVGQRTYYRHKVNIKNISLKPITQLTLLIENLSGSLWGLSPTLEKNTYE 383 V FLHSIT +WTVG+ TYYRH+V IKNIS KPI+ L L+I+NLSGSLWGL+PT EKN YE Sbjct: 552 VQFLHSITSSWTVGESTYYRHRVVIKNISQKPISDLKLMIQNLSGSLWGLTPTNEKNIYE 611 Query: 382 FPQWLKTLKPGSQCSFVYVQGGPQAKVSVISY 287 PQWL L+PGS+C FVYVQGGPQAK+S++S+ Sbjct: 612 LPQWLNVLQPGSECIFVYVQGGPQAKISILSF 643 >ref|XP_002310080.1| glycosyl hydrolase family 9 [Populus trichocarpa] gi|222852983|gb|EEE90530.1| glycosyl hydrolase family 9 [Populus trichocarpa] gi|347466591|gb|AEO97208.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466645|gb|AEO97235.1| endo-1,4-beta-glucanase [Populus trichocarpa] Length = 611 Score = 147 bits (370), Expect = 1e-33 Identities = 69/93 (74%), Positives = 78/93 (83%) Frame = -1 Query: 562 VAFLHSITDTWTVGQRTYYRHKVNIKNISLKPITQLTLLIENLSGSLWGLSPTLEKNTYE 383 V FLHSIT TWTVG TYYRHKV IKN S KPI L L+IE+LSGS+WGL+PT ++NTYE Sbjct: 519 VEFLHSITKTWTVGPTTYYRHKVIIKNKSEKPIKDLKLVIEDLSGSIWGLNPTQQRNTYE 578 Query: 382 FPQWLKTLKPGSQCSFVYVQGGPQAKVSVISYN 284 PQW K L+PGS+CSFVYVQGGPQAKV+V SYN Sbjct: 579 LPQWQKVLQPGSECSFVYVQGGPQAKVTVQSYN 611 >gb|AFZ78644.1| korrigan [Populus tomentosa] Length = 611 Score = 144 bits (364), Expect = 7e-33 Identities = 67/93 (72%), Positives = 77/93 (82%) Frame = -1 Query: 562 VAFLHSITDTWTVGQRTYYRHKVNIKNISLKPITQLTLLIENLSGSLWGLSPTLEKNTYE 383 V FLHSIT TWTVG TYYRH+V IKN S KPI L L++E LSGS+WGL+PT ++NTYE Sbjct: 519 VEFLHSITKTWTVGPTTYYRHRVIIKNKSEKPIKDLKLVVEGLSGSVWGLNPTQQRNTYE 578 Query: 382 FPQWLKTLKPGSQCSFVYVQGGPQAKVSVISYN 284 PQW K L+PGS+CSFVYVQGGPQAKV+V SYN Sbjct: 579 LPQWQKVLQPGSECSFVYVQGGPQAKVTVQSYN 611