BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024808
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1...   105   5e-21
emb|CBI38663.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002268315.1| PREDICTED: protein RFT1 homolog [Vitis vinif...   103   1e-20
gb|AAR15504.1| nuclear division RFT1-like protein [Arabidopsis a...   100   9e-20

>ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|222833933|gb|EEE72410.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/97 (57%), Positives = 68/97 (70%)
 Frame = +2

Query: 2   NMLLRIIYSAVFIKSYFQDAQSFAFRQCLPXXXXXXXXXXXXTFFSERIFLDRMNFWPTM 181
           NM+LRIIYSAVFIK YFQD+ +F+F  CLP            T  SE++FLD  NFWPT 
Sbjct: 380 NMILRIIYSAVFIKYYFQDSSAFSFTSCLPSGWTVLLFSGVITLISEKLFLDHENFWPTF 439

Query: 182 FIHFSVGLVFFSISTVVIYKQEGPFIKKIIRFRDHGD 292
            IHFS+GL  F IS+ +IY++E PFI +IIRFRDH D
Sbjct: 440 LIHFSIGLTCFCISSFIIYRRERPFINRIIRFRDHMD 476


>ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1 homolog [Glycine max]
          Length = 518

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/97 (52%), Positives = 64/97 (65%)
 Frame = +2

Query: 2   NMLLRIIYSAVFIKSYFQDAQSFAFRQCLPXXXXXXXXXXXXTFFSERIFLDRMNFWPTM 181
           NM LRI+YSA+FIK+YFQ + SF+F  CLP            T  SE + LDR NF P+ 
Sbjct: 422 NMTLRILYSAIFIKNYFQGSSSFSFYGCLPSGWIALLLSGVITLISENVLLDRDNFXPSF 481

Query: 182 FIHFSVGLVFFSISTVVIYKQEGPFIKKIIRFRDHGD 292
            +H SVGLV F +S+ VIY +E PFI++IIRF DH D
Sbjct: 482 ILHLSVGLVCFCVSSYVIYCREKPFIRRIIRFNDHVD 518


>emb|CBI38663.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score =  103 bits (257), Expect = 1e-20
 Identities = 52/97 (53%), Positives = 61/97 (62%)
 Frame = +2

Query: 2   NMLLRIIYSAVFIKSYFQDAQSFAFRQCLPXXXXXXXXXXXXTFFSERIFLDRMNFWPTM 181
           NM+LRI YS +FIK+YF+ + SF+   CLP            T  SERIFLDR NF PT 
Sbjct: 426 NMILRIGYSVIFIKNYFRGSASFSLCSCLPSGWRALLFSFVTTLISERIFLDRENFLPTF 485

Query: 182 FIHFSVGLVFFSISTVVIYKQEGPFIKKIIRFRDHGD 292
            IHFS+GL  F IS+ VIY+ E   I KIIR RDH D
Sbjct: 486 LIHFSIGLTCFCISSFVIYRNERALINKIIRLRDHSD 522


>ref|XP_002268315.1| PREDICTED: protein RFT1 homolog [Vitis vinifera]
          Length = 521

 Score =  103 bits (257), Expect = 1e-20
 Identities = 52/97 (53%), Positives = 61/97 (62%)
 Frame = +2

Query: 2   NMLLRIIYSAVFIKSYFQDAQSFAFRQCLPXXXXXXXXXXXXTFFSERIFLDRMNFWPTM 181
           NM+LRI YS +FIK+YF+ + SF+   CLP            T  SERIFLDR NF PT 
Sbjct: 425 NMILRIGYSVIFIKNYFRGSASFSLCSCLPSGWRALLFSFVTTLISERIFLDRENFLPTF 484

Query: 182 FIHFSVGLVFFSISTVVIYKQEGPFIKKIIRFRDHGD 292
            IHFS+GL  F IS+ VIY+ E   I KIIR RDH D
Sbjct: 485 LIHFSIGLTCFCISSFVIYRNERALINKIIRLRDHSD 521


>gb|AAR15504.1| nuclear division RFT1-like protein [Arabidopsis arenosa]
          Length = 478

 Score =  100 bits (250), Expect = 9e-20
 Identities = 46/95 (48%), Positives = 61/95 (64%)
 Frame = +2

Query: 2   NMLLRIIYSAVFIKSYFQDAQSFAFRQCLPXXXXXXXXXXXXTFFSERIFLDRMNFWPTM 181
           NM+ RIIYS  FI+ YFQ   SF+FR+C P            T  SE+  LDR NFW T 
Sbjct: 380 NMIFRIIYSGKFIQRYFQGTSSFSFRKCFPLGWQILILSSIITLISEKTILDRKNFWETF 439

Query: 182 FIHFSVGLVFFSISTVVIYKQEGPFIKKIIRFRDH 286
            +HF++G + F +S +VIY++E  FIK+IIRFRD+
Sbjct: 440 PLHFAIGFICFCLSAIVIYRRERVFIKRIIRFRDY 474