BLASTX nr result

ID: Coptis23_contig00024798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024798
         (1176 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63047.1| hypothetical protein VITISV_044031 [Vitis vinifera]   329   9e-88
ref|XP_002519130.1| conserved hypothetical protein [Ricinus comm...   322   1e-85
ref|XP_002313078.1| predicted protein [Populus trichocarpa] gi|2...   310   5e-82
ref|XP_003541116.1| PREDICTED: transmembrane protein 45B-like [G...   309   8e-82
ref|XP_003606844.1| Transmembrane protein 45B [Medicago truncatu...   303   7e-80

>emb|CAN63047.1| hypothetical protein VITISV_044031 [Vitis vinifera]
          Length = 294

 Score =  329 bits (843), Expect = 9e-88
 Identities = 164/277 (59%), Positives = 187/277 (67%)
 Frame = +2

Query: 83  MGTFVGHMVPGCALILLGLWHTFNTIKAYYLKGKANFHSRLWYPFNDFSFKFKYXXXXXX 262
           MGTFVGH+VPG AL LLGLWHT NTI+AY LKG  NF  + WYPFN      KY      
Sbjct: 1   MGTFVGHLVPGLALTLLGLWHTINTIRAYALKGSTNFTVKFWYPFNSPFPNLKYLELIFI 60

Query: 263 XXXXXXXXXXQVLDFYHFEFSFMLDSLEHATMFLHLAIYAGIVLVVELTHIPEVFMWFIG 442
                     QVLDF     SF LD+ EHA+MFLHLAI+AG  L  ELTH  E      G
Sbjct: 61  LFFSIFAIFMQVLDFPFIRLSFELDNFEHASMFLHLAIFAGFTLSAELTHSLEGLSGVSG 120

Query: 443 LLASSVFSQELFLLHFHSTDHVGLEGHYHWLLQLIVVVSFVSALAMISFPXXXXXXXXXX 622
           +LA+SVF QELFLLHFHSTDHVGLEGHYHWLLQLIV+VS V+ALA  SFP          
Sbjct: 121 ILAASVFGQELFLLHFHSTDHVGLEGHYHWLLQLIVLVSLVAALAATSFPTSFPAALVLS 180

Query: 623 XXXXFQGCWFLNMGFILWVPRFVPKGCMVSFVEGGNDMHGAVTCGTNDAFLRARALANLQ 802
               FQGCWF+NMGF+LWVP FVPKGC V      + MHGAV CG++DA LRARALAN+Q
Sbjct: 181 TAVVFQGCWFMNMGFMLWVPEFVPKGCKVQLTSSSDSMHGAVACGSHDADLRARALANMQ 240

Query: 803 FSLILAAIMILTSSLCLTLAGKYIARRQSIEYERIHS 913
           FS IL+ I++   SLCL L GK  ++  SIEYE++HS
Sbjct: 241 FSWILSGILMFVGSLCLKLVGKCXSKAGSIEYEQLHS 277


>ref|XP_002519130.1| conserved hypothetical protein [Ricinus communis]
           gi|223541793|gb|EEF43341.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 294

 Score =  322 bits (825), Expect = 1e-85
 Identities = 158/279 (56%), Positives = 191/279 (68%), Gaps = 1/279 (0%)
 Frame = +2

Query: 83  MGTFVGHMVPGCALILLGLWHTFNTIKAYYLKGKANFHSRLWYPFNDFSFKFKYXXXXXX 262
           MGTFVGH VP  ALILLGLWHT NT++AY LKG  +F+++ WYPF     + K+      
Sbjct: 9   MGTFVGHFVPALALILLGLWHTINTVRAYCLKGSTSFNAKFWYPFYGTLSRLKHFELIFV 68

Query: 263 XXXXXXXXXXQVLDFYHFEFSFMLDSLEHATMFLHLAIYAGIVLVVELTHIPEVFMWFIG 442
                     Q+LDF    ++F LD+ EHATMFLHLAI++G  L  E+TH  E+     G
Sbjct: 69  LSFSAFAIIVQILDFPLLRYAFKLDNFEHATMFLHLAIFSGFTLFTEITHSSEILSGVSG 128

Query: 443 LLASSVFSQELFLLHFHSTDHVGLEGHYHWLLQLIVVVSFVSALAMISFPXXXXXXXXXX 622
           +LASSVF QELFLLHFHSTDHVGLEGHYHWLLQLIV VS VSALA  +FP          
Sbjct: 129 ILASSVFGQELFLLHFHSTDHVGLEGHYHWLLQLIVFVSLVSALAATNFPSSFPAALVLS 188

Query: 623 XXXXFQGCWFLNMGFILWVPRFVPKGCMVSFVEGGN-DMHGAVTCGTNDAFLRARALANL 799
               FQGCWF+NMGF+LWVP  +P+GC++   E     MHGAVTCG+ DA LRARALANL
Sbjct: 189 ISVVFQGCWFMNMGFMLWVPNLIPEGCVMQLSEANTYGMHGAVTCGSIDADLRARALANL 248

Query: 800 QFSLILAAIMILTSSLCLTLAGKYIARRQSIEYERIHSR 916
           QFS ILAAI++ T   CL  AG+  +R QSIEYE++H++
Sbjct: 249 QFSWILAAILLFTGGACLKSAGRCTSRVQSIEYEQLHNK 287


>ref|XP_002313078.1| predicted protein [Populus trichocarpa] gi|222849486|gb|EEE87033.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  310 bits (794), Expect = 5e-82
 Identities = 156/280 (55%), Positives = 188/280 (67%), Gaps = 1/280 (0%)
 Frame = +2

Query: 83  MGTFVGHMVPGCALILLGLWHTFNTIKAYYLKGKANFHSRLWYPFNDFSFKFKYXXXXXX 262
           MGTFVGH+VPG AL LLGLWHT NTI+A+  KG  NF  + WYPF     + K+      
Sbjct: 1   MGTFVGHIVPGLALTLLGLWHTVNTIRAFCNKGCTNFTVKFWYPFYGPVSRLKHLELIFI 60

Query: 263 XXXXXXXXXXQVLDFYHFEFSFMLDSLEHATMFLHLAIYAGIVLVVELTHIPEVFMWFIG 442
                     Q+LDF    FSF LDS EHA++FLHLAI+AG  L  E++   ++     G
Sbjct: 61  LSFSVLAIFMQLLDFPSLRFSFKLDSFEHASIFLHLAIFAGFTLSAEISQSSDILSGVSG 120

Query: 443 LLASSVFSQELFLLHFHSTDHVGLEGHYHWLLQLIVVVSFVSALAMISFPXXXXXXXXXX 622
           +LA+ VF QELFLLHFHSTDHVGLEGHYHWLLQLIV VS ++ALA  +FP          
Sbjct: 121 ILAAFVFGQELFLLHFHSTDHVGLEGHYHWLLQLIVFVSLLAALAATNFPNSFPAALVLS 180

Query: 623 XXXXFQGCWFLNMGFILWVPRFVPKGCMVSFVEGG-NDMHGAVTCGTNDAFLRARALANL 799
               FQGCWF+NMGF+LW P F+P+GC++ F E   +DMHGAVTCG+  A LRA ALANL
Sbjct: 181 ISVVFQGCWFMNMGFMLWFPDFIPEGCVMQFAEASIDDMHGAVTCGSLAAELRATALANL 240

Query: 800 QFSLILAAIMILTSSLCLTLAGKYIARRQSIEYERIHSRG 919
           QFS ILA I++LT  +CL LA K   R QS EYE++HSRG
Sbjct: 241 QFSWILAGILLLTGCMCLKLARKCTPRSQSTEYEQLHSRG 280


>ref|XP_003541116.1| PREDICTED: transmembrane protein 45B-like [Glycine max]
          Length = 295

 Score =  309 bits (792), Expect = 8e-82
 Identities = 152/281 (54%), Positives = 193/281 (68%), Gaps = 1/281 (0%)
 Frame = +2

Query: 83  MGTFVGHMVPGCALILLGLWHTFNTIKAYYLKGKANFHSRLWYPFNDFSFKFKYXXXXXX 262
           MG+FVGH V G AL LLGLW+T +TI++Y +KG ANF  R WY FN    + K+      
Sbjct: 1   MGSFVGHAVQGSALALLGLWNTIHTIRSYLVKGPANFTVRFWYQFNTPQSRLKHLELVSI 60

Query: 263 XXXXXXXXXXQVLDFYHFEFSFMLDSLEHATMFLHLAIYAGIVLVVELTHIPEVFMWFIG 442
                     Q+LDF HF ++F LD+ EHATMF+HLA++AG  L  ELT   ++F  F+G
Sbjct: 61  LSFSVLAIFMQILDFPHFHYAFKLDNFEHATMFIHLALFAGFSLSTELTDSLDLFSGFVG 120

Query: 443 LLASSVFSQELFLLHFHSTDHVGLEGHYHWLLQLIVVVSFVSALAMISFPXXXXXXXXXX 622
           +LASSVFSQELFLLHFHSTDHVGLEGHYHWLLQLIV+VS V+ALA   FP          
Sbjct: 121 ILASSVFSQELFLLHFHSTDHVGLEGHYHWLLQLIVLVSLVAALAATIFPNNFNAALVLS 180

Query: 623 XXXXFQGCWFLNMGFILWVPRFVPKGCMVSFVE-GGNDMHGAVTCGTNDAFLRARALANL 799
               FQGCWF+NMGF+LW+P FVP+GC+++  +  G+++ GAVTCG+ +A  RAR LANL
Sbjct: 181 ISVIFQGCWFINMGFMLWIPAFVPEGCVMNLAKASGHEIIGAVTCGSKEADFRARGLANL 240

Query: 800 QFSLILAAIMILTSSLCLTLAGKYIARRQSIEYERIHSRGA 922
           QFS IL++I+I    +CL LA K       +EYERI ++GA
Sbjct: 241 QFSWILSSILIFAGIICLKLARKCTITTNRLEYERIQTKGA 281


>ref|XP_003606844.1| Transmembrane protein 45B [Medicago truncatula]
           gi|355507899|gb|AES89041.1| Transmembrane protein 45B
           [Medicago truncatula]
          Length = 293

 Score =  303 bits (775), Expect = 7e-80
 Identities = 150/286 (52%), Positives = 191/286 (66%), Gaps = 1/286 (0%)
 Frame = +2

Query: 83  MGTFVGHMVPGCALILLGLWHTFNTIKAYYLKGKANFHSRLWYPFNDFSFKFKYXXXXXX 262
           M  F+ H+V G AL  LGLWH  NTIK+Y +KG +NF  R WY FN   FKFK+      
Sbjct: 1   MDLFIAHLVQGLALTFLGLWHIINTIKSYLVKGPSNFTIRFWYHFNTPHFKFKHLELVSI 60

Query: 263 XXXXXXXXXXQVLDFYHFEFSFMLDSLEHATMFLHLAIYAGIVLVVELTHIPEVFMWFIG 442
                     Q+LDF HF ++F LD+ EHATMF+HLA++AG  L+ ELT   E+F  F+ 
Sbjct: 61  LSFSILAILMQILDFPHFHYAFKLDNFEHATMFIHLALFAGFSLLTELTDSLELFSGFVA 120

Query: 443 LLASSVFSQELFLLHFHSTDHVGLEGHYHWLLQLIVVVSFVSALAMISFPXXXXXXXXXX 622
           +L SSVFSQELFLLHFHSTDHVG EGHYHWLLQLIV VS +++LA   FP          
Sbjct: 121 ILVSSVFSQELFLLHFHSTDHVGPEGHYHWLLQLIVFVSLIASLAAAVFPNSFNAAIVLS 180

Query: 623 XXXXFQGCWFLNMGFILWVPRFVPKGCMVSFV-EGGNDMHGAVTCGTNDAFLRARALANL 799
               FQGCWF+NMGF+L++P FVP+GC+++   E  +++HGAVTCG+ +A  RA+ LANL
Sbjct: 181 ISLIFQGCWFINMGFMLYIPTFVPEGCVMNLARESASEIHGAVTCGSKEADFRAKGLANL 240

Query: 800 QFSLILAAIMILTSSLCLTLAGKYIARRQSIEYERIHSRGADANQI 937
           QFS IL+AIMI    +CL LA K+      +EYERI S+ AD+  +
Sbjct: 241 QFSWILSAIMIFAGIVCLKLAKKFTI-VDRLEYERIQSKVADSTVV 285


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