BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024797
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25886.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002530604.1| GTP-binding protein hflx, putative [Ricinus ...   100   2e-19
emb|CAN74733.1| hypothetical protein VITISV_037839 [Vitis vinifera]    97   1e-18
ref|XP_002263978.2| PREDICTED: GTP-binding protein At3g49725, ch...    97   1e-18
ref|XP_002877696.1| pentatricopeptide repeat-containing protein ...    92   4e-17

>emb|CBI25886.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/84 (59%), Positives = 63/84 (75%)
 Frame = +2

Query: 149 SFSSHSLKQKTDEISNPNFIYNKDPEKPPKLFVVQPRLRSDVALKAKLSEALNLANSLEE 328
           SFS   L QK ++  N   ++N+DP+ PPKLFVVQPRLR D  L+AKL EA+NLANSLEE
Sbjct: 60  SFSQTPLLQKKEDPYNDASLFNRDPKSPPKLFVVQPRLRPDTLLQAKLDEAINLANSLEE 119

Query: 329 QRDGFFVGDISEKERPAHVIVQNP 400
           QRDG++  ++ EK  P HV+VQNP
Sbjct: 120 QRDGYYDTELCEKGLPPHVVVQNP 143


>ref|XP_002530604.1| GTP-binding protein hflx, putative [Ricinus communis]
           gi|223529852|gb|EEF31784.1| GTP-binding protein hflx,
           putative [Ricinus communis]
          Length = 625

 Score =  100 bits (248), Expect = 2e-19
 Identities = 63/116 (54%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
 Frame = +2

Query: 68  LRSISHLRTLVTSLNRISIINQLPG-THS-FSSHSLKQKTDEISNPNF--IYNKDPEKPP 235
           LRS   L +L  S   ++IIN     THS FSS   +Q ++EI       I N+DP  PP
Sbjct: 7   LRSRLSLNSLALS-QTLTIINPHQSITHSQFSSKQHQQNSNEIDTHGVVSIINRDPTSPP 65

Query: 236 KLFVVQPRLRSDVALKAKLSEALNLANSLEEQRDGFFVGDISEKERPAHVIVQNPV 403
           +LFVVQPRLR D  L+AKL+EAL LANSLEEQRDG+F  D  +K  P HVIVQNP+
Sbjct: 66  RLFVVQPRLRPDSFLQAKLNEALCLANSLEEQRDGYFDTDFFDKALPPHVIVQNPI 121


>emb|CAN74733.1| hypothetical protein VITISV_037839 [Vitis vinifera]
          Length = 743

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/76 (59%), Positives = 59/76 (77%)
 Frame = +2

Query: 173 QKTDEISNPNFIYNKDPEKPPKLFVVQPRLRSDVALKAKLSEALNLANSLEEQRDGFFVG 352
           +K ++  N   ++N+DP+ PPKLFVVQPRLR D  L+AKL EA+NLANSLEEQRDG++  
Sbjct: 222 KKKEDPYNDASLFNRDPKSPPKLFVVQPRLRPDTLLQAKLDEAINLANSLEEQRDGYYDT 281

Query: 353 DISEKERPAHVIVQNP 400
           ++ EK  P HV+VQNP
Sbjct: 282 ELCEKGLPPHVVVQNP 297


>ref|XP_002263978.2| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like,
           partial [Vitis vinifera]
          Length = 555

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/75 (60%), Positives = 58/75 (77%)
 Frame = +2

Query: 176 KTDEISNPNFIYNKDPEKPPKLFVVQPRLRSDVALKAKLSEALNLANSLEEQRDGFFVGD 355
           K ++  N   ++N+DP+ PPKLFVVQPRLR D  L+AKL EA+NLANSLEEQRDG++  +
Sbjct: 1   KKEDPYNDASLFNRDPKSPPKLFVVQPRLRPDTLLQAKLDEAINLANSLEEQRDGYYDTE 60

Query: 356 ISEKERPAHVIVQNP 400
           + EK  P HV+VQNP
Sbjct: 61  LCEKGLPPHVVVQNP 75


>ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323534|gb|EFH53955.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1188

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 54/119 (45%), Positives = 70/119 (58%), Gaps = 6/119 (5%)
 Frame = +2

Query: 65  LLRSISHLRTLVTSLNRISIINQLPGTHSFSSHSLKQKTDEISNPN------FIYNKDPE 226
           L R+     T  + L R  + ++ P +  FSS     KT E+   +       +  KDP 
Sbjct: 636 LARNRLRSETPSSFLARNHLRSKTPSSSPFSSKRHAPKTSEVEEESTPKDSVLLNPKDPS 695

Query: 227 KPPKLFVVQPRLRSDVALKAKLSEALNLANSLEEQRDGFFVGDISEKERPAHVIVQNPV 403
            PPKLF+VQPRL     L+AKL+EAL LANSLEEQR G+F  D  +KE P+HV+VQNPV
Sbjct: 696 SPPKLFLVQPRLAPPKLLQAKLNEALCLANSLEEQRYGYFESDFFDKELPSHVVVQNPV 754