BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024789
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285884.1| PREDICTED: NAD(P)H-quinone oxidoreductase su...   246   3e-63
ref|XP_004139803.1| PREDICTED: NAD(P)H-quinone oxidoreductase su...   244   9e-63
ref|XP_002520302.1| conserved hypothetical protein [Ricinus comm...   238   5e-61
sp|A9PJQ8.1|NDHM_POPJC RecName: Full=NAD(P)H-quinone oxidoreduct...   238   8e-61
ref|XP_003523420.1| PREDICTED: NAD(P)H-quinone oxidoreductase su...   234   7e-60

>ref|XP_002285884.1| PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic
           [Vitis vinifera] gi|209573123|sp|A7NVJ4.1|NDHM_VITVI
           RecName: Full=NAD(P)H-quinone oxidoreductase subunit M,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase I
           subunit M; Short=NDH-1 subunit M; Short=NDH-M; Flags:
           Precursor gi|302141757|emb|CBI18960.3| unnamed protein
           product [Vitis vinifera]
          Length = 208

 Score =  246 bits (627), Expect = 3e-63
 Identities = 120/137 (87%), Positives = 124/137 (90%), Gaps = 4/137 (2%)
 Frame = +2

Query: 206 LPR----QPMAKSKNMGVEYGGQWLSSVTRHVRIYAAYIDPVTHAFDQTQMDKLTLLLDP 373
           LPR    Q   KSKNM  EYGGQWLSSVTRHVRIYAAYIDPVT  FDQTQMDKLTL+LDP
Sbjct: 65  LPRPVEPQVNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDP 124

Query: 374 TNEFVWTSETCNKVYAYFQELVDHYEGAPLAEYTLRLIGSDIEHYIRKLLYDGEIKYNMN 553
           TNEFVWTSETCNKVYAYFQELVDHYEGAPL EYTLRLIGSDIEHYIRKLLYDGEIKYNMN
Sbjct: 125 TNEFVWTSETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYNMN 184

Query: 554 ARTLNFSMGKPRVIFNN 604
           AR LNFSMGKPR++FN+
Sbjct: 185 ARVLNFSMGKPRILFND 201


>ref|XP_004139803.1| PREDICTED: NAD(P)H-quinone oxidoreductase subunit M,
           chloroplastic-like [Cucumis sativus]
           gi|449492622|ref|XP_004159051.1| PREDICTED:
           NAD(P)H-quinone oxidoreductase subunit M,
           chloroplastic-like [Cucumis sativus]
          Length = 209

 Score =  244 bits (623), Expect = 9e-63
 Identities = 115/132 (87%), Positives = 121/132 (91%)
 Frame = +2

Query: 215 QPMAKSKNMGVEYGGQWLSSVTRHVRIYAAYIDPVTHAFDQTQMDKLTLLLDPTNEFVWT 394
           Q   KSKNMG EYGGQWLSSVTRHVRIYAAYIDP+T  FDQTQMDKLTLLLDP+NEF+W 
Sbjct: 69  QQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLDPSNEFLWN 128

Query: 395 SETCNKVYAYFQELVDHYEGAPLAEYTLRLIGSDIEHYIRKLLYDGEIKYNMNARTLNFS 574
            ETCNKVYAYFQELVDHYEGAPL EYTLRLIGSDIEHYIRK+LYDGEIKYNMNAR LNFS
Sbjct: 129 PETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVLNFS 188

Query: 575 MGKPRVIFNNND 610
           MGKPR++FN ND
Sbjct: 189 MGKPRIMFNAND 200


>ref|XP_002520302.1| conserved hypothetical protein [Ricinus communis]
           gi|223540521|gb|EEF42088.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 209

 Score =  238 bits (608), Expect = 5e-61
 Identities = 113/133 (84%), Positives = 120/133 (90%)
 Frame = +2

Query: 212 RQPMAKSKNMGVEYGGQWLSSVTRHVRIYAAYIDPVTHAFDQTQMDKLTLLLDPTNEFVW 391
           +Q   KSKN+  EYGGQWLSSVTRHVRIYAAYIDP T  FDQTQMDKLTLLLDPTNEF+W
Sbjct: 71  KQVNVKSKNLTREYGGQWLSSVTRHVRIYAAYIDPETWEFDQTQMDKLTLLLDPTNEFLW 130

Query: 392 TSETCNKVYAYFQELVDHYEGAPLAEYTLRLIGSDIEHYIRKLLYDGEIKYNMNARTLNF 571
           T ETC KVY+YFQELVDHYEGAPL EYTLRLIGSDIEHYIRKLLYDGEIKYNMNA  LNF
Sbjct: 131 TDETCYKVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYNMNANVLNF 190

Query: 572 SMGKPRVIFNNND 610
           SMGKPR++FNN+D
Sbjct: 191 SMGKPRIMFNNDD 203


>sp|A9PJQ8.1|NDHM_POPJC RecName: Full=NAD(P)H-quinone oxidoreductase subunit M,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase I
           subunit M; Short=NDH-1 subunit M; Short=NDH-M; Flags:
           Precursor gi|118489619|gb|ABK96611.1| unknown [Populus
           trichocarpa x Populus deltoides]
          Length = 203

 Score =  238 bits (606), Expect = 8e-61
 Identities = 113/131 (86%), Positives = 119/131 (90%)
 Frame = +2

Query: 215 QPMAKSKNMGVEYGGQWLSSVTRHVRIYAAYIDPVTHAFDQTQMDKLTLLLDPTNEFVWT 394
           Q   KSKNMG EYGGQWLSSVTRHVRIYAAYIDP T  FDQTQ DKLTL+LDPT+EFVWT
Sbjct: 67  QVNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPETCEFDQTQTDKLTLILDPTDEFVWT 126

Query: 395 SETCNKVYAYFQELVDHYEGAPLAEYTLRLIGSDIEHYIRKLLYDGEIKYNMNARTLNFS 574
            ETC KVY+YFQELVDHYEGAPL EYTLRLIGSDIEHYIRKLLYDGEIKYNMNAR LNFS
Sbjct: 127 DETCYKVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYNMNARVLNFS 186

Query: 575 MGKPRVIFNNN 607
           MGKPR++FNN+
Sbjct: 187 MGKPRILFNND 197


>ref|XP_003523420.1| PREDICTED: NAD(P)H-quinone oxidoreductase subunit M,
           chloroplastic-like isoform 1 [Glycine max]
           gi|356509367|ref|XP_003523421.1| PREDICTED:
           NAD(P)H-quinone oxidoreductase subunit M,
           chloroplastic-like isoform 2 [Glycine max]
          Length = 217

 Score =  234 bits (598), Expect = 7e-60
 Identities = 110/128 (85%), Positives = 117/128 (91%)
 Frame = +2

Query: 227 KSKNMGVEYGGQWLSSVTRHVRIYAAYIDPVTHAFDQTQMDKLTLLLDPTNEFVWTSETC 406
           KSKNM  EYGGQWLS  TRHVRIYAAYIDPVT  FDQTQMDKLTL+LDPT+EFVW +ETC
Sbjct: 81  KSKNMLREYGGQWLSCATRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPTDEFVWNTETC 140

Query: 407 NKVYAYFQELVDHYEGAPLAEYTLRLIGSDIEHYIRKLLYDGEIKYNMNARTLNFSMGKP 586
           N VY+YFQELVDHYEGAPL EYTLRLIGSDIEHYIRK+LYDG IKYNMNAR LNFSMGKP
Sbjct: 141 NMVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGAIKYNMNARVLNFSMGKP 200

Query: 587 RVIFNNND 610
           R++FNNND
Sbjct: 201 RIMFNNND 208