BLASTX nr result

ID: Coptis23_contig00024787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024787
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO73539.1| leafy/floricaula [Salix discolor]                       70   2e-10
gb|AEK26560.1| leafy protein [Populus tremula] gi|340007713|gb|A...    70   2e-10
gb|AGC24708.1| LFY-like protein [Litchi chinensis]                     69   3e-10
ref|XP_002322307.1| predicted protein [Populus trichocarpa] gi|7...    69   3e-10
gb|AEK26561.1| leafy protein [Populus tremula]                         69   3e-10

>gb|AAO73539.1| leafy/floricaula [Salix discolor]
          Length = 375

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 45/96 (46%), Positives = 53/96 (55%)
 Frame = -3

Query: 290 SL*KWETRATAPAPLLQNRIFEEIGATTLXXXXXXXXXXXXXRDQHIGRGLEELFQGYRV 111
           SL KW+TRA  P P   NR+ E +                         GLEELFQ Y +
Sbjct: 9   SLFKWDTRAMVPHP---NRLLEMVAPPQQPPAAAFAVRPRELC------GLEELFQAYGI 59

Query: 110 RYSTVAKIAELGFTVNTLLGMTDGEIDEILVTNLSQ 3
           RY T AKIAELGFTVNTLL M D E+DE ++ +LSQ
Sbjct: 60  RYYTAAKIAELGFTVNTLLDMKDEELDE-MMNSLSQ 94


>gb|AEK26560.1| leafy protein [Populus tremula] gi|340007713|gb|AEK26562.1| leafy
           protein [Populus tremula]
          Length = 377

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 45/96 (46%), Positives = 53/96 (55%)
 Frame = -3

Query: 290 SL*KWETRATAPAPLLQNRIFEEIGATTLXXXXXXXXXXXXXRDQHIGRGLEELFQGYRV 111
           SL KW+TRA  P P   NR+ E +                         GLEELFQ Y +
Sbjct: 9   SLFKWDTRAMVPHP---NRLLEXVPPPQQPPAAAFAVRPRELC------GLEELFQAYGI 59

Query: 110 RYSTVAKIAELGFTVNTLLGMTDGEIDEILVTNLSQ 3
           RY T AKIAELGFTVNTLL M D E+DE ++ +LSQ
Sbjct: 60  RYYTAAKIAELGFTVNTLLDMKDEELDE-MMNSLSQ 94


>gb|AGC24708.1| LFY-like protein [Litchi chinensis]
          Length = 390

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 43/90 (47%), Positives = 52/90 (57%)
 Frame = -3

Query: 290 SL*KWETRATAPAPLLQNRIFEEIGATTLXXXXXXXXXXXXXRDQHIGRGLEELFQGYRV 111
           SL KW+ R   P P    R+FE  G  T              R + +G GLEELFQ Y +
Sbjct: 9   SLFKWDPRTVVPPPA---RLFE--GMATASAPLVGSAAYTMVRPRDLG-GLEELFQAYGI 62

Query: 110 RYSTVAKIAELGFTVNTLLGMTDGEIDEIL 21
           RY T AKIA+LGFTVNTLL M D E+DE++
Sbjct: 63  RYYTAAKIAKLGFTVNTLLDMKDEELDELM 92


>ref|XP_002322307.1| predicted protein [Populus trichocarpa]
           gi|7227895|sp|O04064.1|FLLH_POPTR RecName:
           Full=Floricaula/leafy homolog; AltName: Full=PTLF
           gi|1930094|gb|AAB51533.1| FLORICAULA/LEAFY homolog
           [Populus trichocarpa] gi|222869303|gb|EEF06434.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 45/96 (46%), Positives = 53/96 (55%)
 Frame = -3

Query: 290 SL*KWETRATAPAPLLQNRIFEEIGATTLXXXXXXXXXXXXXRDQHIGRGLEELFQGYRV 111
           SL KW+TRA  P P   NR+ E +                         GLEELFQ Y +
Sbjct: 9   SLFKWDTRAMVPHP---NRLLEMVPPPQQPPAAAFAVRPRELC------GLEELFQAYGI 59

Query: 110 RYSTVAKIAELGFTVNTLLGMTDGEIDEILVTNLSQ 3
           RY T AKIAELGFTVNTLL M D E+DE ++ +LSQ
Sbjct: 60  RYYTAAKIAELGFTVNTLLDMKDEELDE-MMNSLSQ 94


>gb|AEK26561.1| leafy protein [Populus tremula]
          Length = 377

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 45/96 (46%), Positives = 53/96 (55%)
 Frame = -3

Query: 290 SL*KWETRATAPAPLLQNRIFEEIGATTLXXXXXXXXXXXXXRDQHIGRGLEELFQGYRV 111
           SL KW+TRA  P P   NR+ E +                         GLEELFQ Y +
Sbjct: 9   SLFKWDTRAMVPHP---NRLLEMVPPPQQPPAAAFAVRPRELC------GLEELFQAYGI 59

Query: 110 RYSTVAKIAELGFTVNTLLGMTDGEIDEILVTNLSQ 3
           RY T AKIAELGFTVNTLL M D E+DE ++ +LSQ
Sbjct: 60  RYYTAAKIAELGFTVNTLLDMKDEELDE-MMNSLSQ 94


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