BLASTX nr result
ID: Coptis23_contig00024785
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00024785
(727 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275474.1| PREDICTED: LETM1 and EF-hand domain-containi... 102 2e-24
ref|XP_003635110.1| PREDICTED: LETM1 and EF-hand domain-containi... 101 2e-23
emb|CBI23351.3| unnamed protein product [Vitis vinifera] 101 2e-23
ref|XP_002514773.1| leucine zipper-ef-hand containing transmembr... 102 3e-23
ref|XP_002312206.1| predicted protein [Populus trichocarpa] gi|2... 100 5e-23
>ref|XP_002275474.1| PREDICTED: LETM1 and EF-hand domain-containing protein 1,
mitochondrial [Vitis vinifera]
gi|296084337|emb|CBI24725.3| unnamed protein product
[Vitis vinifera]
Length = 764
Score = 102 bits (255), Expect(3) = 2e-24
Identities = 55/102 (53%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
Frame = +1
Query: 43 LGITSMPPGNSLSDKRRKLEFLQKGEEHIRDEEQKEKE-QATLKXXXXXXXXXXTTQEDV 219
+GIT++P +S+S++RRKLE+L+ EE I++EE+KE+E QA +K +QED+
Sbjct: 512 VGITALPSEDSVSERRRKLEYLEMQEELIKEEEEKEEEEQAKIKETV-------VSQEDL 564
Query: 220 ALKEMRMPTAKEAQQHAKEKTLEQQEQLCELSRVLAVLASTS 345
ALKEM +PTA+EAQ+ A+ + +E+QEQLCELSR LAVLAS S
Sbjct: 565 ALKEMTIPTAREAQEQARARAVEKQEQLCELSRALAVLASAS 606
Score = 28.1 bits (61), Expect(3) = 2e-24
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 2 MSSLPDEVVDTVG 40
+SSLPDEVVDTVG
Sbjct: 501 LSSLPDEVVDTVG 513
Score = 28.1 bits (61), Expect(3) = 2e-24
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 456 SVCRESEVFLRLVNKEV 506
SV RE E FLRLVNKE+
Sbjct: 607 SVSREREEFLRLVNKEI 623
>ref|XP_003635110.1| PREDICTED: LETM1 and EF-hand domain-containing protein 1,
mitochondrial-like [Vitis vinifera]
Length = 504
Score = 101 bits (252), Expect(3) = 2e-23
Identities = 54/102 (52%), Positives = 77/102 (75%), Gaps = 1/102 (0%)
Frame = +1
Query: 43 LGITSMPPGNSLSDKRRKLEFLQKGEEHIRDEEQKEKE-QATLKXXXXXXXXXXTTQEDV 219
+G+T++P +S+S++RRKLEFL+ EE I++EE+KE+E QA +K Q+DV
Sbjct: 252 VGVTTLPSEDSVSERRRKLEFLEMQEELIKEEEEKEEEVQARIKEST-------VNQKDV 304
Query: 220 ALKEMRMPTAKEAQQHAKEKTLEQQEQLCELSRVLAVLASTS 345
AL+EM +PTA+EAQ+ A+ KTLE+Q+Q+CELSR L VLAS S
Sbjct: 305 ALEEMTIPTAREAQEQAEAKTLEKQQQICELSRALVVLASAS 346
Score = 28.1 bits (61), Expect(3) = 2e-23
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 2 MSSLPDEVVDTVG 40
+SSLPDEVVDTVG
Sbjct: 241 LSSLPDEVVDTVG 253
Score = 25.8 bits (55), Expect(3) = 2e-23
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 456 SVCRESEVFLRLVNKEV 506
SV E E FLRLVNKE+
Sbjct: 347 SVSWEREAFLRLVNKEI 363
>emb|CBI23351.3| unnamed protein product [Vitis vinifera]
Length = 432
Score = 101 bits (252), Expect(3) = 2e-23
Identities = 54/102 (52%), Positives = 77/102 (75%), Gaps = 1/102 (0%)
Frame = +1
Query: 43 LGITSMPPGNSLSDKRRKLEFLQKGEEHIRDEEQKEKE-QATLKXXXXXXXXXXTTQEDV 219
+G+T++P +S+S++RRKLEFL+ EE I++EE+KE+E QA +K Q+DV
Sbjct: 180 VGVTTLPSEDSVSERRRKLEFLEMQEELIKEEEEKEEEVQARIKEST-------VNQKDV 232
Query: 220 ALKEMRMPTAKEAQQHAKEKTLEQQEQLCELSRVLAVLASTS 345
AL+EM +PTA+EAQ+ A+ KTLE+Q+Q+CELSR L VLAS S
Sbjct: 233 ALEEMTIPTAREAQEQAEAKTLEKQQQICELSRALVVLASAS 274
Score = 28.1 bits (61), Expect(3) = 2e-23
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 2 MSSLPDEVVDTVG 40
+SSLPDEVVDTVG
Sbjct: 169 LSSLPDEVVDTVG 181
Score = 25.8 bits (55), Expect(3) = 2e-23
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 456 SVCRESEVFLRLVNKEV 506
SV E E FLRLVNKE+
Sbjct: 275 SVSWEREAFLRLVNKEI 291
>ref|XP_002514773.1| leucine zipper-ef-hand containing transmembrane protein, putative
[Ricinus communis] gi|223545824|gb|EEF47327.1| leucine
zipper-ef-hand containing transmembrane protein,
putative [Ricinus communis]
Length = 758
Score = 102 bits (253), Expect(3) = 3e-23
Identities = 55/102 (53%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
Frame = +1
Query: 43 LGITSMPPGNSLSDKRRKLEFLQKGEEHIRDEEQKEKE-QATLKXXXXXXXXXXTTQEDV 219
+G+T++P +S+S++RRKLEFL+ EE I++EE++E+E QA +K +Q+DV
Sbjct: 505 VGVTALPSEDSVSERRRKLEFLEMQEELIKEEEEEEEEKQAKMKESVG-------SQKDV 557
Query: 220 ALKEMRMPTAKEAQQHAKEKTLEQQEQLCELSRVLAVLASTS 345
AL+EM +PTA+EAQ+ A+ KTLE+ EQLCELSR LAVLAS S
Sbjct: 558 ALEEMTIPTAREAQEQARAKTLEKHEQLCELSRALAVLASAS 599
Score = 28.1 bits (61), Expect(3) = 3e-23
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 2 MSSLPDEVVDTVG 40
+SSLPDEVVDTVG
Sbjct: 494 LSSLPDEVVDTVG 506
Score = 24.6 bits (52), Expect(3) = 3e-23
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 456 SVCRESEVFLRLVNKEV 506
SV RE E FL+LV KE+
Sbjct: 600 SVSREREEFLKLVKKEI 616
>ref|XP_002312206.1| predicted protein [Populus trichocarpa] gi|222852026|gb|EEE89573.1|
predicted protein [Populus trichocarpa]
Length = 687
Score = 100 bits (248), Expect(3) = 5e-23
Identities = 53/102 (51%), Positives = 79/102 (77%), Gaps = 1/102 (0%)
Frame = +1
Query: 43 LGITSMPPGNSLSDKRRKLEFLQKGEEHIRDEEQKEKE-QATLKXXXXXXXXXXTTQEDV 219
+G+T++P +S+S++RRKLE+L+ EE I++EE++E+E QA +K ++Q+DV
Sbjct: 434 VGVTALPSEDSVSERRRKLEYLEMQEELIKEEEEEEEEEQAKMKESV-------SSQKDV 486
Query: 220 ALKEMRMPTAKEAQQHAKEKTLEQQEQLCELSRVLAVLASTS 345
AL+EM +PTA++A++ AK KTLE+ EQLCELSR LAVLAS S
Sbjct: 487 ALEEMSIPTARDAREQAKAKTLEKHEQLCELSRALAVLASAS 528
Score = 28.1 bits (61), Expect(3) = 5e-23
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 2 MSSLPDEVVDTVG 40
+SSLPDEVVDTVG
Sbjct: 423 LSSLPDEVVDTVG 435
Score = 25.8 bits (55), Expect(3) = 5e-23
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 456 SVCRESEVFLRLVNKEV 506
SV RE E FLRLV KE+
Sbjct: 529 SVSREREEFLRLVKKEI 545