BLASTX nr result

ID: Coptis23_contig00024773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024773
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329219.1| predicted protein [Populus trichocarpa] gi|1...    74   2e-11
gb|AFK46230.1| unknown [Lotus japonicus]                               68   9e-10
ref|XP_002878086.1| oxidoreductase [Arabidopsis lyrata subsp. ly...    67   2e-09
ref|XP_002267177.1| PREDICTED: quinone oxidoreductase-like prote...    67   2e-09
ref|XP_002520899.1| quinone oxidoreductase, putative [Ricinus co...    67   2e-09

>ref|XP_002329219.1| predicted protein [Populus trichocarpa] gi|118487115|gb|ABK95387.1|
           unknown [Populus trichocarpa]
           gi|222871000|gb|EEF08131.1| predicted protein [Populus
           trichocarpa]
          Length = 352

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/60 (65%), Positives = 45/60 (75%)
 Frame = +1

Query: 163 GDEKVLLLTSQGANHVLYTSKVNSAEGVKEFLKARKLREVGVLYDPVGGKPTKLSMKLLN 342
           GDEKV  L S G +HV+ +SK +    VK+FLKARKL+ V VLYDPVGGK TK SMKLLN
Sbjct: 188 GDEKVQFLKSLGVDHVVDSSKESVIASVKDFLKARKLKGVDVLYDPVGGKLTKESMKLLN 247


>gb|AFK46230.1| unknown [Lotus japonicus]
          Length = 346

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/59 (59%), Positives = 42/59 (71%)
 Frame = +1

Query: 163 GDEKVLLLTSQGANHVLYTSKVNSAEGVKEFLKARKLREVGVLYDPVGGKPTKLSMKLL 339
           G EKV LL S G +HV+  +  N  E VKEFLKARKL+ + VLYDPVGGK TK  ++LL
Sbjct: 183 GAEKVQLLKSHGVDHVVDLTNENVTESVKEFLKARKLKGIDVLYDPVGGKLTKECLRLL 241


>ref|XP_002878086.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
           gi|297323924|gb|EFH54345.1| oxidoreductase [Arabidopsis
           lyrata subsp. lyrata]
          Length = 348

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/59 (59%), Positives = 40/59 (67%)
 Frame = +1

Query: 163 GDEKVLLLTSQGANHVLYTSKVNSAEGVKEFLKARKLREVGVLYDPVGGKPTKLSMKLL 339
           G EK+ LL S G +HV+     N    VKEF+K RKLR V VLYDPVGGK TK SMK+L
Sbjct: 184 GTEKIQLLKSMGVDHVVDLGTENVISSVKEFIKTRKLRGVDVLYDPVGGKLTKESMKVL 242


>ref|XP_002267177.1| PREDICTED: quinone oxidoreductase-like protein 2 homolog [Vitis
           vinifera] gi|297736646|emb|CBI25517.3| unnamed protein
           product [Vitis vinifera]
          Length = 345

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/60 (60%), Positives = 43/60 (71%)
 Frame = +1

Query: 163 GDEKVLLLTSQGANHVLYTSKVNSAEGVKEFLKARKLREVGVLYDPVGGKPTKLSMKLLN 342
           G  KV +L S G +HV+ +S  N  E VK FLKA+KL+ V VLYDPVGGK TK +MKLLN
Sbjct: 181 GAGKVQILKSLGVDHVVDSSIENVTESVKNFLKAKKLKGVDVLYDPVGGKLTKETMKLLN 240


>ref|XP_002520899.1| quinone oxidoreductase, putative [Ricinus communis]
           gi|223540030|gb|EEF41608.1| quinone oxidoreductase,
           putative [Ricinus communis]
          Length = 344

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/60 (60%), Positives = 44/60 (73%)
 Frame = +1

Query: 163 GDEKVLLLTSQGANHVLYTSKVNSAEGVKEFLKARKLREVGVLYDPVGGKPTKLSMKLLN 342
           G EKV LL S G +HV+ +SK N    VK+FL ++KL+ V VLYDPVGGK TK S+KLLN
Sbjct: 180 GFEKVELLKSLGVDHVVDSSKENVIASVKDFLLSKKLKGVDVLYDPVGGKLTKDSLKLLN 239


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