BLASTX nr result

ID: Coptis23_contig00024768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024768
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277931.1| PREDICTED: homeobox protein knotted-1-like 1...   117   1e-24
ref|XP_002512511.1| homeobox protein knotted-1, putative [Ricinu...   111   5e-23
gb|ADF81047.1| KNOTTED-like homebox protein 2 [Cocos nucifera]        111   7e-23
gb|AEA11233.1| knotted-like homebox protein [Elaeis guineensis]       108   3e-22
ref|XP_002330254.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21

>ref|XP_002277931.1| PREDICTED: homeobox protein knotted-1-like 1 [Vitis vinifera]
           gi|147820996|emb|CAN77695.1| hypothetical protein
           VITISV_015614 [Vitis vinifera]
           gi|296089776|emb|CBI39595.3| unnamed protein product
           [Vitis vinifera]
          Length = 310

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/108 (52%), Positives = 72/108 (66%)
 Frame = +1

Query: 1   NIETQLNDICEGMSTSTISAGNYHSDEAVGSSEEELSCGEFEASGSQDFSGPSPANMELK 180
           +IE+QL+++C+G  T+  S G+Y+SDEA G+SEEELSCGE E S SQ+  G  P + ELK
Sbjct: 138 DIESQLSNLCKGALTAGTS-GSYYSDEAAGTSEEELSCGEAEVSESQESLGARPGDQELK 196

Query: 181 NMLMQKYSGYLSNXXXXXXXXXXXXXXXXXXXTTLLDWWNTHYRWPYP 324
            MLM+KYSGYLS+                   T LL+WWNTHYRWPYP
Sbjct: 197 EMLMRKYSGYLSSLRKEFLKKRKKGKLPKDARTMLLEWWNTHYRWPYP 244


>ref|XP_002512511.1| homeobox protein knotted-1, putative [Ricinus communis]
           gi|223548472|gb|EEF49963.1| homeobox protein knotted-1,
           putative [Ricinus communis]
          Length = 327

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/108 (50%), Positives = 69/108 (63%)
 Frame = +1

Query: 1   NIETQLNDICEGMSTSTISAGNYHSDEAVGSSEEELSCGEFEASGSQDFSGPSPANMELK 180
           +IE+QL+++C+G  T T    +Y SDEAVG+SEEE+SCGE EAS S++  G  P + +LK
Sbjct: 155 DIESQLSNLCKGTLTKTF---HYGSDEAVGTSEEEISCGEIEASESRESCGSRPVDPDLK 211

Query: 181 NMLMQKYSGYLSNXXXXXXXXXXXXXXXXXXXTTLLDWWNTHYRWPYP 324
            ML++KYSGYLSN                     LLDWWN HYRWPYP
Sbjct: 212 GMLLRKYSGYLSNLRKEFLKKRKKGKLPKDARMILLDWWNNHYRWPYP 259


>gb|ADF81047.1| KNOTTED-like homebox protein 2 [Cocos nucifera]
          Length = 317

 Score =  111 bits (277), Expect = 7e-23
 Identities = 58/111 (52%), Positives = 72/111 (64%), Gaps = 3/111 (2%)
 Frame = +1

Query: 1   NIETQLNDICEGMSTS---TISAGNYHSDEAVGSSEEELSCGEFEASGSQDFSGPSPANM 171
           +IE QL+++C+G +TS   T + GN  SDE VGSSEEELSCG+ +AS SQ+ SG   A+ 
Sbjct: 142 SIEVQLSNLCKGCTTSSSTTTATGNSPSDEVVGSSEEELSCGDVDASESQE-SGSRLADH 200

Query: 172 ELKNMLMQKYSGYLSNXXXXXXXXXXXXXXXXXXXTTLLDWWNTHYRWPYP 324
           ELK ML++KYSGYLSN                    TLLDWW+ HYRWPYP
Sbjct: 201 ELKEMLLKKYSGYLSNLRKEFLKKRKKGKLPKDARLTLLDWWHAHYRWPYP 251


>gb|AEA11233.1| knotted-like homebox protein [Elaeis guineensis]
          Length = 318

 Score =  108 bits (271), Expect = 3e-22
 Identities = 58/111 (52%), Positives = 71/111 (63%), Gaps = 3/111 (2%)
 Frame = +1

Query: 1   NIETQLNDICEGMSTS---TISAGNYHSDEAVGSSEEELSCGEFEASGSQDFSGPSPANM 171
           +IE QL+++C+G +TS   T   GN  SDE VGSSEEELSCG+ +AS  Q+ SG   A+ 
Sbjct: 146 SIEMQLSNLCKGRTTSSSTTGGTGNSPSDEMVGSSEEELSCGDVDASECQE-SGSRLADH 204

Query: 172 ELKNMLMQKYSGYLSNXXXXXXXXXXXXXXXXXXXTTLLDWWNTHYRWPYP 324
           ELK ML++KYSGYLSN                    TLLDWW+THYRWPYP
Sbjct: 205 ELKEMLLKKYSGYLSNLRKEFLKKRKKGKLPKDARLTLLDWWHTHYRWPYP 255


>ref|XP_002330254.1| predicted protein [Populus trichocarpa] gi|222871710|gb|EEF08841.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/108 (49%), Positives = 65/108 (60%)
 Frame = +1

Query: 1   NIETQLNDICEGMSTSTISAGNYHSDEAVGSSEEELSCGEFEASGSQDFSGPSPANMELK 180
           +IE+QL+ +C+G  T     G+  +DE  G+SEEELSCGE EAS SQ+ +G S     LK
Sbjct: 152 SIESQLSSLCKGTLTKMFDYGS--ADEPAGTSEEELSCGEVEASESQETTGVSSQEQNLK 209

Query: 181 NMLMQKYSGYLSNXXXXXXXXXXXXXXXXXXXTTLLDWWNTHYRWPYP 324
            MLM+KYS +LSN                   TTLLDWWN HYRWPYP
Sbjct: 210 GMLMRKYSAHLSNLRKEFLKNRKKGKLPKDARTTLLDWWNHHYRWPYP 257


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