BLASTX nr result
ID: Coptis23_contig00024749
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00024749 (389 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN70803.1| hypothetical protein VITISV_044067 [Vitis vinifera] 54 3e-07 emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera] 54 3e-07 emb|CAN77820.1| hypothetical protein VITISV_043441 [Vitis vinifera] 52 3e-07 emb|CAN66945.1| hypothetical protein VITISV_020092 [Vitis vinifera] 50 4e-07 emb|CAN62052.1| hypothetical protein VITISV_016642 [Vitis vinifera] 52 4e-07 >emb|CAN70803.1| hypothetical protein VITISV_044067 [Vitis vinifera] Length = 1850 Score = 53.5 bits (127), Expect(2) = 3e-07 Identities = 23/43 (53%), Positives = 29/43 (67%) Frame = -3 Query: 237 WSF*NCLFSRFGFGIKWWGWIKACLSTA*YSVLVDALPVGHFQ 109 WSF + + GFG KW GWIK C+STA +SVL++ P G FQ Sbjct: 1253 WSFILTVMKKMGFGEKWLGWIKWCISTASFSVLINGTPKGFFQ 1295 Score = 25.8 bits (55), Expect(2) = 3e-07 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = -2 Query: 115 FPISKGIRQGDPLSHF 68 F S+G+RQGDPLS + Sbjct: 1294 FQSSRGLRQGDPLSPY 1309 >emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera] Length = 1848 Score = 53.5 bits (127), Expect(2) = 3e-07 Identities = 23/43 (53%), Positives = 29/43 (67%) Frame = -3 Query: 237 WSF*NCLFSRFGFGIKWWGWIKACLSTA*YSVLVDALPVGHFQ 109 WSF + + GFG KW GWIK C+STA +SVL++ P G FQ Sbjct: 1223 WSFLLTVMQKMGFGEKWLGWIKWCISTASFSVLINGTPKGFFQ 1265 Score = 25.8 bits (55), Expect(2) = 3e-07 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = -2 Query: 115 FPISKGIRQGDPLSHF 68 F S+G+RQGDPLS + Sbjct: 1264 FQSSRGLRQGDPLSPY 1279 >emb|CAN77820.1| hypothetical protein VITISV_043441 [Vitis vinifera] Length = 1034 Score = 51.6 bits (122), Expect(2) = 3e-07 Identities = 23/46 (50%), Positives = 29/46 (63%) Frame = -3 Query: 237 WSF*NCLFSRFGFGIKWWGWIKACLSTA*YSVLVDALPVGHFQFLK 100 W+F + + GFG KW WIK C+STA +SVLV+ P G FQ K Sbjct: 224 WTFILTVMQKMGFGEKWIRWIKWCISTASFSVLVBGTPTGFFQSSK 269 Score = 27.3 bits (59), Expect(2) = 3e-07 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 8/31 (25%) Frame = -2 Query: 115 FPISKGIRQGDPLSHF--------YSFWLQR 47 F SKG+RQGDPLS + +S +LQR Sbjct: 265 FQSSKGLRQGDPLSPYLFVIAMXVFSAFLQR 295 >emb|CAN66945.1| hypothetical protein VITISV_020092 [Vitis vinifera] Length = 894 Score = 49.7 bits (117), Expect(2) = 4e-07 Identities = 21/47 (44%), Positives = 30/47 (63%) Frame = -3 Query: 240 SWSF*NCLFSRFGFGIKWWGWIKACLSTA*YSVLVDALPVGHFQFLK 100 +W F + + GFG KW GW+ +C+STA +SVLV+ +P G F K Sbjct: 532 NWQFLMKVLQKMGFGQKWLGWMWSCISTARFSVLVNGVPAGFFPSTK 578 Score = 28.9 bits (63), Expect(2) = 4e-07 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = -2 Query: 115 FPISKGIRQGDPLSHF 68 FP +KG+RQGDPLS + Sbjct: 574 FPSTKGLRQGDPLSPY 589 >emb|CAN62052.1| hypothetical protein VITISV_016642 [Vitis vinifera] Length = 764 Score = 51.6 bits (122), Expect(2) = 4e-07 Identities = 24/46 (52%), Positives = 29/46 (63%) Frame = -3 Query: 237 WSF*NCLFSRFGFGIKWWGWIKACLSTA*YSVLVDALPVGHFQFLK 100 WSF + + GFG KW GWIK C+STA +SVLV+ G FQ K Sbjct: 673 WSFLLTVMQKMGFGEKWIGWIKWCISTASFSVLVNGTSTGFFQSSK 718 Score = 26.9 bits (58), Expect(2) = 4e-07 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = -2 Query: 115 FPISKGIRQGDPLSHF 68 F SKG+RQGDPLS + Sbjct: 714 FQSSKGLRQGDPLSPY 729