BLASTX nr result

ID: Coptis23_contig00024749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024749
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70803.1| hypothetical protein VITISV_044067 [Vitis vinifera]    54   3e-07
emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]    54   3e-07
emb|CAN77820.1| hypothetical protein VITISV_043441 [Vitis vinifera]    52   3e-07
emb|CAN66945.1| hypothetical protein VITISV_020092 [Vitis vinifera]    50   4e-07
emb|CAN62052.1| hypothetical protein VITISV_016642 [Vitis vinifera]    52   4e-07

>emb|CAN70803.1| hypothetical protein VITISV_044067 [Vitis vinifera]
          Length = 1850

 Score = 53.5 bits (127), Expect(2) = 3e-07
 Identities = 23/43 (53%), Positives = 29/43 (67%)
 Frame = -3

Query: 237  WSF*NCLFSRFGFGIKWWGWIKACLSTA*YSVLVDALPVGHFQ 109
            WSF   +  + GFG KW GWIK C+STA +SVL++  P G FQ
Sbjct: 1253 WSFILTVMKKMGFGEKWLGWIKWCISTASFSVLINGTPKGFFQ 1295



 Score = 25.8 bits (55), Expect(2) = 3e-07
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -2

Query: 115  FPISKGIRQGDPLSHF 68
            F  S+G+RQGDPLS +
Sbjct: 1294 FQSSRGLRQGDPLSPY 1309


>emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]
          Length = 1848

 Score = 53.5 bits (127), Expect(2) = 3e-07
 Identities = 23/43 (53%), Positives = 29/43 (67%)
 Frame = -3

Query: 237  WSF*NCLFSRFGFGIKWWGWIKACLSTA*YSVLVDALPVGHFQ 109
            WSF   +  + GFG KW GWIK C+STA +SVL++  P G FQ
Sbjct: 1223 WSFLLTVMQKMGFGEKWLGWIKWCISTASFSVLINGTPKGFFQ 1265



 Score = 25.8 bits (55), Expect(2) = 3e-07
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -2

Query: 115  FPISKGIRQGDPLSHF 68
            F  S+G+RQGDPLS +
Sbjct: 1264 FQSSRGLRQGDPLSPY 1279


>emb|CAN77820.1| hypothetical protein VITISV_043441 [Vitis vinifera]
          Length = 1034

 Score = 51.6 bits (122), Expect(2) = 3e-07
 Identities = 23/46 (50%), Positives = 29/46 (63%)
 Frame = -3

Query: 237 WSF*NCLFSRFGFGIKWWGWIKACLSTA*YSVLVDALPVGHFQFLK 100
           W+F   +  + GFG KW  WIK C+STA +SVLV+  P G FQ  K
Sbjct: 224 WTFILTVMQKMGFGEKWIRWIKWCISTASFSVLVBGTPTGFFQSSK 269



 Score = 27.3 bits (59), Expect(2) = 3e-07
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 8/31 (25%)
 Frame = -2

Query: 115 FPISKGIRQGDPLSHF--------YSFWLQR 47
           F  SKG+RQGDPLS +        +S +LQR
Sbjct: 265 FQSSKGLRQGDPLSPYLFVIAMXVFSAFLQR 295


>emb|CAN66945.1| hypothetical protein VITISV_020092 [Vitis vinifera]
          Length = 894

 Score = 49.7 bits (117), Expect(2) = 4e-07
 Identities = 21/47 (44%), Positives = 30/47 (63%)
 Frame = -3

Query: 240 SWSF*NCLFSRFGFGIKWWGWIKACLSTA*YSVLVDALPVGHFQFLK 100
           +W F   +  + GFG KW GW+ +C+STA +SVLV+ +P G F   K
Sbjct: 532 NWQFLMKVLQKMGFGQKWLGWMWSCISTARFSVLVNGVPAGFFPSTK 578



 Score = 28.9 bits (63), Expect(2) = 4e-07
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = -2

Query: 115 FPISKGIRQGDPLSHF 68
           FP +KG+RQGDPLS +
Sbjct: 574 FPSTKGLRQGDPLSPY 589


>emb|CAN62052.1| hypothetical protein VITISV_016642 [Vitis vinifera]
          Length = 764

 Score = 51.6 bits (122), Expect(2) = 4e-07
 Identities = 24/46 (52%), Positives = 29/46 (63%)
 Frame = -3

Query: 237 WSF*NCLFSRFGFGIKWWGWIKACLSTA*YSVLVDALPVGHFQFLK 100
           WSF   +  + GFG KW GWIK C+STA +SVLV+    G FQ  K
Sbjct: 673 WSFLLTVMQKMGFGEKWIGWIKWCISTASFSVLVNGTSTGFFQSSK 718



 Score = 26.9 bits (58), Expect(2) = 4e-07
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 115 FPISKGIRQGDPLSHF 68
           F  SKG+RQGDPLS +
Sbjct: 714 FQSSKGLRQGDPLSPY 729


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