BLASTX nr result

ID: Coptis23_contig00024748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024748
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257...   118   6e-25
ref|NP_193558.3| starch synthase 4 [Arabidopsis thaliana] gi|122...   117   1e-24
emb|CAA16796.1| starch synthase-like protein [Arabidopsis thalia...   117   1e-24
emb|CAB40375.1| starch synthase, isoform V [Vigna unguiculata]        116   2e-24
ref|XP_003524791.1| PREDICTED: uncharacterized protein LOC100788...   111   7e-23

>ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257130 [Vitis vinifera]
           gi|297740652|emb|CBI30834.3| unnamed protein product
           [Vitis vinifera]
          Length = 1011

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/75 (73%), Positives = 67/75 (89%)
 Frame = +1

Query: 1   VRTAEGGRGLHTTLNSYSKKFVGVLNGIDTDSWDPSTDDFLKVQYNADDPQGKLENKEAL 180
           VRT+EGGRGLH+TLNS+SKKF+G+LNGIDTD+WDP+TD +LK Q+NA+D QGK ENKEAL
Sbjct: 741 VRTSEGGRGLHSTLNSHSKKFIGILNGIDTDAWDPATDVYLKSQFNANDLQGKAENKEAL 800

Query: 181 RKKLKLSSADSTQPL 225
           RK L LS AD+ +PL
Sbjct: 801 RKHLGLSYADTRRPL 815


>ref|NP_193558.3| starch synthase 4 [Arabidopsis thaliana]
           gi|122230204|sp|Q0WVX5.1|SSY4_ARATH RecName:
           Full=Probable starch synthase 4,
           chloroplastic/amyloplastic; Short=AtSS4; AltName:
           Full=Soluble starch synthase IV; Flags: Precursor
           gi|110741548|dbj|BAE98723.1| starch synthase-like
           protein [Arabidopsis thaliana]
           gi|332658615|gb|AEE84015.1| starch synthase 4
           [Arabidopsis thaliana]
          Length = 1040

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/75 (73%), Positives = 66/75 (88%)
 Frame = +1

Query: 1   VRTAEGGRGLHTTLNSYSKKFVGVLNGIDTDSWDPSTDDFLKVQYNADDPQGKLENKEAL 180
           VRTAEGG+GLH+TLN +SKKF+G+LNGIDTDSW+P+TD FLK Q+NA D QGK ENK AL
Sbjct: 769 VRTAEGGKGLHSTLNFHSKKFIGILNGIDTDSWNPATDPFLKAQFNAKDLQGKEENKHAL 828

Query: 181 RKKLKLSSADSTQPL 225
           RK+L LSSA+S +PL
Sbjct: 829 RKQLGLSSAESRRPL 843


>emb|CAA16796.1| starch synthase-like protein [Arabidopsis thaliana]
           gi|7268617|emb|CAB78826.1| starch synthase-like protein
           [Arabidopsis thaliana]
          Length = 1071

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/75 (73%), Positives = 66/75 (88%)
 Frame = +1

Query: 1   VRTAEGGRGLHTTLNSYSKKFVGVLNGIDTDSWDPSTDDFLKVQYNADDPQGKLENKEAL 180
           VRTAEGG+GLH+TLN +SKKF+G+LNGIDTDSW+P+TD FLK Q+NA D QGK ENK AL
Sbjct: 772 VRTAEGGKGLHSTLNFHSKKFIGILNGIDTDSWNPATDPFLKAQFNAKDLQGKEENKHAL 831

Query: 181 RKKLKLSSADSTQPL 225
           RK+L LSSA+S +PL
Sbjct: 832 RKQLGLSSAESRRPL 846


>emb|CAB40375.1| starch synthase, isoform V [Vigna unguiculata]
          Length = 874

 Score =  116 bits (290), Expect = 2e-24
 Identities = 54/75 (72%), Positives = 67/75 (89%)
 Frame = +1

Query: 1   VRTAEGGRGLHTTLNSYSKKFVGVLNGIDTDSWDPSTDDFLKVQYNADDPQGKLENKEAL 180
           VRTAEGG+GLH+TL+++SKKF+G+LNGIDTD W+P+TD FL+VQYNA+D QGK ENKEAL
Sbjct: 604 VRTAEGGKGLHSTLSTHSKKFIGILNGIDTDIWNPATDPFLQVQYNANDLQGKSENKEAL 663

Query: 181 RKKLKLSSADSTQPL 225
           R+ L LSSAD  +PL
Sbjct: 664 RRNLGLSSADVRRPL 678


>ref|XP_003524791.1| PREDICTED: uncharacterized protein LOC100788308 [Glycine max]
          Length = 989

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/75 (68%), Positives = 64/75 (85%)
 Frame = +1

Query: 1   VRTAEGGRGLHTTLNSYSKKFVGVLNGIDTDSWDPSTDDFLKVQYNADDPQGKLENKEAL 180
           VRT+EGG GLH+TL+++SKKF+G+LNGIDTD+W+P+TD FL VQYNA D QGK ENK+AL
Sbjct: 719 VRTSEGGHGLHSTLSAHSKKFIGILNGIDTDAWNPATDAFLPVQYNATDLQGKAENKQAL 778

Query: 181 RKKLKLSSADSTQPL 225
           R+ L LSS D  +PL
Sbjct: 779 RRNLGLSSTDVRRPL 793


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