BLASTX nr result

ID: Coptis23_contig00024744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024744
         (707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002462004.1| hypothetical protein SORBIDRAFT_02g012425 [S...    62   1e-07
ref|XP_002436742.1| hypothetical protein SORBIDRAFT_10g007990 [S...    59   1e-06
gb|ABA97607.1| hypothetical protein LOC_Os12g23030 [Oryza sativa...    59   1e-06
ref|XP_002455091.1| hypothetical protein SORBIDRAFT_03g004200 [S...    58   2e-06
ref|XP_002449443.1| hypothetical protein SORBIDRAFT_05g011880 [S...    57   3e-06

>ref|XP_002462004.1| hypothetical protein SORBIDRAFT_02g012425 [Sorghum bicolor]
           gi|241925381|gb|EER98525.1| hypothetical protein
           SORBIDRAFT_02g012425 [Sorghum bicolor]
          Length = 135

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
 Frame = -3

Query: 279 SRLLCRVSQSY---VDILSESYADKPTFLHRIPVKSSDYLKLACNFIRKQFPNLLDVGLQ 109
           +RL+ R  Q     V+I++  +A K  F+ R+P+  SD + L   F RKQFP  L   + 
Sbjct: 9   TRLMVRAMQDNGIDVEIVAGQHARKRVFIPRLPLSPSDDISLPYKFKRKQFPVRLSFVMM 68

Query: 108 IHKSQRQTIPHLGTSLPNHVLDTSQYH 28
           I+KSQ QTIP++G  LP HV    Q +
Sbjct: 69  INKSQGQTIPNVGIYLPEHVFSHGQLY 95


>ref|XP_002436742.1| hypothetical protein SORBIDRAFT_10g007990 [Sorghum bicolor]
           gi|241914965|gb|EER88109.1| hypothetical protein
           SORBIDRAFT_10g007990 [Sorghum bicolor]
          Length = 143

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
 Frame = -3

Query: 279 SRLLCRVSQSYV---DILSESYADKPTFLHRIPVKSSDYLKLACNFIRKQFPNLLDVGLQ 109
           +RL+ R  Q      +I+   +A K  FL RIP+  SD + L     RKQFP  L   + 
Sbjct: 17  TRLMVRAFQDNAVDAEIVGGQHAGKRVFLPRIPMSPSDDISLPFKMKRKQFPIRLSFAMT 76

Query: 108 IHKSQRQTIPHLGTSLPNHVLDTSQYH 28
           I+K+Q QTIP++G  LP HV    Q +
Sbjct: 77  INKAQGQTIPNVGIYLPEHVFSHGQLY 103


>gb|ABA97607.1| hypothetical protein LOC_Os12g23030 [Oryza sativa Japonica Group]
          Length = 1005

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
 Frame = -3

Query: 279  SRLLCRVSQSYV---DILSESYADKPTFLHRIPVKSSDYLKLACNFIRKQFPNLLDVGLQ 109
            +RL+ R  Q      +I+   +A+K  F+ RIP+  SD + L   F RKQFP  L   + 
Sbjct: 879  TRLMVRAFQDNAIDAEIVGGQHANKRVFIPRIPLPPSDDISLPFKFKRKQFPICLSFAMT 938

Query: 108  IHKSQRQTIPHLGTSLPNHVLDTSQYH 28
            I+KSQ QTIP++G  LP  V    Q +
Sbjct: 939  INKSQGQTIPNVGIYLPEPVFSHGQLY 965


>ref|XP_002455091.1| hypothetical protein SORBIDRAFT_03g004200 [Sorghum bicolor]
           gi|241927066|gb|EES00211.1| hypothetical protein
           SORBIDRAFT_03g004200 [Sorghum bicolor]
          Length = 124

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/72 (41%), Positives = 41/72 (56%)
 Frame = -3

Query: 243 DILSESYADKPTFLHRIPVKSSDYLKLACNFIRKQFPNLLDVGLQIHKSQRQTIPHLGTS 64
           +I+   +A K  F+ RIP+  SD + LA    RKQFP  L   + I+K+Q QTIPH+G  
Sbjct: 13  EIVGGQHAGKRVFIPRIPMSPSDDISLAFKLKRKQFPIRLSFAMTINKAQGQTIPHVGIY 72

Query: 63  LPNHVLDTSQYH 28
           LP  V    Q +
Sbjct: 73  LPEPVFSHGQLY 84


>ref|XP_002449443.1| hypothetical protein SORBIDRAFT_05g011880 [Sorghum bicolor]
           gi|241935286|gb|EES08431.1| hypothetical protein
           SORBIDRAFT_05g011880 [Sorghum bicolor]
          Length = 708

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
 Frame = -3

Query: 279 SRLLCRVSQSYV---DILSESYADKPTFLHRIPVKSSDYLKLACNFIRKQFPNLLDVGLQ 109
           +RL+ R  Q      +I++  +A K  F+ R+P+  SD + L   F RKQFP  L   + 
Sbjct: 582 TRLMVRALQDNAIDAEIVAGQHARKRVFIPRLPLSPSDDISLPFKFKRKQFPVRLSFAMM 641

Query: 108 IHKSQRQTIPHLGTSLPNHVLDTSQYH 28
           I+KSQ QTIP++G  LP  V    Q +
Sbjct: 642 INKSQGQTIPNVGIYLPEPVFSHGQLY 668


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