BLASTX nr result
ID: Coptis23_contig00024736
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00024736
(1694 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002326690.1| predicted protein [Populus trichocarpa] gi|2... 855 0.0
ref|XP_002329547.1| predicted protein [Populus trichocarpa] gi|1... 837 0.0
ref|XP_002282871.1| PREDICTED: beta-amylase 3, chloroplastic-lik... 836 0.0
emb|CAN62440.1| hypothetical protein VITISV_032500 [Vitis vinifera] 832 0.0
ref|XP_002517513.1| Beta-amylase, putative [Ricinus communis] gi... 830 0.0
>ref|XP_002326690.1| predicted protein [Populus trichocarpa] gi|222834012|gb|EEE72489.1|
predicted protein [Populus trichocarpa]
Length = 547
Score = 855 bits (2208), Expect = 0.0
Identities = 401/544 (73%), Positives = 467/544 (85%), Gaps = 1/544 (0%)
Frame = +1
Query: 43 MALTLRYSSSFINPIDTKNPKTTDEFVGSVSFPKTKHSYYCLRVKNSSVNEAQTSHEKTL 222
M L+ S+SFI+ DT++PKT D+F G++ F K S C +S+ EAQ SH++ L
Sbjct: 1 MTSALQSSTSFISLKDTRSPKTPDDFSGTICFAHIKPS--CRLQAKNSMQEAQLSHDEIL 58
Query: 223 YFNGTGEERAERQHVLSNQKK-NGPKVPVYVMLPLDTVSIGGNLNRPKSLNASLMALKSA 399
G ++ H +S + N KVPV+VMLPLDT++IGGNLN+P+++NASLMAL+SA
Sbjct: 59 MTEGRKSKKGGELHAISGPRSSNDSKVPVFVMLPLDTITIGGNLNKPRAMNASLMALRSA 118
Query: 400 GVEGVMVDAWWGLVEKNGPMNYNWKGYFDLVQMVEKHGLKIQVVMSFHQCGGNVGDSCSI 579
GVEGVMVDAWWGLVEK+GP+ YNW+GY +LVQMV+KHGLK+QVVMSFHQCGGNVGDSCSI
Sbjct: 119 GVEGVMVDAWWGLVEKDGPLKYNWEGYAELVQMVQKHGLKLQVVMSFHQCGGNVGDSCSI 178
Query: 580 PLPPWVLEEISNNPDLVYTDRSGRRNLEYISLGCDSLPVLRGRTPIQVYSDYMRSFRDHF 759
PLPPWVLEE+S NPDLVYTDRSGRRN EYISLGCDSLP+LRGRTPIQVYSDYMRSFR+ F
Sbjct: 179 PLPPWVLEEMSKNPDLVYTDRSGRRNPEYISLGCDSLPILRGRTPIQVYSDYMRSFRERF 238
Query: 760 KDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMKASLKATADAIG 939
KDYLG VI+EIQVGMGPCGELRYP+YPE+NGTWRFPGIGEFQCYDKYM+ASL+A+A+A+G
Sbjct: 239 KDYLGDVIMEIQVGMGPCGELRYPAYPETNGTWRFPGIGEFQCYDKYMRASLEASAEALG 298
Query: 940 KESWGTNGPHDSGQYNQFPEDTGFFRRDGTWNTDYGQFFLQWYSHKLIEHGDQILAAAQG 1119
K+ WG GPHDSGQYN FPE+TGFFRRDGTWNT+YGQFFL+WYS KL+EHG++ILAAA+G
Sbjct: 299 KKDWGRGGPHDSGQYNHFPEETGFFRRDGTWNTEYGQFFLEWYSGKLLEHGEKILAAAEG 358
Query: 1120 IYRGTGAKLSGKVAGIHWHYNTRSHAAELTAGYYNTRHHDGYLPIAQMLGKRNAVLNFTC 1299
I++GTGA+LSGKVAGIHWHY TRSHAAELTAGYYNTRHHDGYLPIA+M K V NFTC
Sbjct: 359 IFQGTGAQLSGKVAGIHWHYRTRSHAAELTAGYYNTRHHDGYLPIARMFSKHGVVFNFTC 418
Query: 1300 MEMRDGEQPASANCSPQGLVKQVKMATKLTGTELAGENALERYDEGAYAQVLETSRSDSG 1479
MEMRDGEQP ANCSPQGLV+QVKMAT+ GTELAGENALERYD GAY QVL TSRS+SG
Sbjct: 419 MEMRDGEQPEHANCSPQGLVRQVKMATRTAGTELAGENALERYDAGAYTQVLATSRSESG 478
Query: 1480 NGLTAFTYLRLNKRMFEGDNWRNLVVFVNNMSEGGRMIRLSEYDSTGSDLYVGFIHDRKM 1659
NGLTAFTYLR+NK++FEGDNWR LV FV +MSEGGR +LSE DS G++LY+GFI D+ +
Sbjct: 479 NGLTAFTYLRMNKKLFEGDNWRQLVEFVKSMSEGGRNEKLSECDSHGTNLYIGFIKDKSV 538
Query: 1660 NIKK 1671
K
Sbjct: 539 QKTK 542
>ref|XP_002329547.1| predicted protein [Populus trichocarpa] gi|118487474|gb|ABK95564.1|
unknown [Populus trichocarpa] gi|222870256|gb|EEF07387.1|
predicted protein [Populus trichocarpa]
Length = 548
Score = 837 bits (2161), Expect = 0.0
Identities = 399/541 (73%), Positives = 464/541 (85%), Gaps = 2/541 (0%)
Frame = +1
Query: 43 MALTLRYSSSFINPIDTKNPKTTDEFVGSVSFPKTKHSYYCLRVKNSSVNEAQTSHEKTL 222
M +TLR S+SFI+ T++ KT D F G+V F + K S L+ KNS EAQ S + L
Sbjct: 1 MTITLRSSTSFISLRHTRSLKTPDGFSGTVCFAQIKPSCR-LQAKNSK-QEAQLSQDDIL 58
Query: 223 YFNGTGEERAERQHVLS--NQKKNGPKVPVYVMLPLDTVSIGGNLNRPKSLNASLMALKS 396
G + E+ H +S + + +VPV+VMLPLDTV+IGGNLN+P+++NASLMAL+S
Sbjct: 59 VTEGRKSKNWEKLHAISGPDHSSSNSRVPVFVMLPLDTVTIGGNLNKPRAMNASLMALRS 118
Query: 397 AGVEGVMVDAWWGLVEKNGPMNYNWKGYFDLVQMVEKHGLKIQVVMSFHQCGGNVGDSCS 576
AGVEGVMVDAWWGLVEK+GP+ YNW+GY +LVQMV+KHGLK+QVVMSFHQCGGNVGDSCS
Sbjct: 119 AGVEGVMVDAWWGLVEKDGPLKYNWEGYAELVQMVQKHGLKLQVVMSFHQCGGNVGDSCS 178
Query: 577 IPLPPWVLEEISNNPDLVYTDRSGRRNLEYISLGCDSLPVLRGRTPIQVYSDYMRSFRDH 756
IPLPPWVLEE+S N DLVYTD+SGRRN EYISLGCDSLP+LRGRTPIQVYSDYMRSFR+
Sbjct: 179 IPLPPWVLEEMSKNLDLVYTDKSGRRNPEYISLGCDSLPLLRGRTPIQVYSDYMRSFRNR 238
Query: 757 FKDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMKASLKATADAI 936
FKDYLG+VI EIQVGMGPCGELRYP+YPES GTW FPGIGEFQCYDKYM+ASL+A+A+A+
Sbjct: 239 FKDYLGQVITEIQVGMGPCGELRYPAYPESKGTWNFPGIGEFQCYDKYMRASLEASAEAV 298
Query: 937 GKESWGTNGPHDSGQYNQFPEDTGFFRRDGTWNTDYGQFFLQWYSHKLIEHGDQILAAAQ 1116
GK WG GPHDSGQYNQFPE+TGFFRRDGTWNT+YGQFFL+WYS KL+EHGD+ILAAA+
Sbjct: 299 GKTGWGQRGPHDSGQYNQFPEETGFFRRDGTWNTEYGQFFLEWYSGKLLEHGDKILAAAE 358
Query: 1117 GIYRGTGAKLSGKVAGIHWHYNTRSHAAELTAGYYNTRHHDGYLPIAQMLGKRNAVLNFT 1296
GI+RGTGAKLSGKVAGIHWHY TRSHAAELTAGYYNTRHHDGYLP+A+M K V NFT
Sbjct: 359 GIFRGTGAKLSGKVAGIHWHYGTRSHAAELTAGYYNTRHHDGYLPMARMFSKHGVVFNFT 418
Query: 1297 CMEMRDGEQPASANCSPQGLVKQVKMATKLTGTELAGENALERYDEGAYAQVLETSRSDS 1476
CMEMRDGEQP ANCSP+GLV+QVKMAT+ TELAGENALERYD GA++QV+ TSRS+S
Sbjct: 419 CMEMRDGEQPQHANCSPEGLVRQVKMATRTARTELAGENALERYDAGAFSQVMATSRSES 478
Query: 1477 GNGLTAFTYLRLNKRMFEGDNWRNLVVFVNNMSEGGRMIRLSEYDSTGSDLYVGFIHDRK 1656
GNGLTAFTYLR+NKR+FEGDNW +LV FV +MSEGGR +LSE DS+G++LYVGFI D+
Sbjct: 479 GNGLTAFTYLRMNKRLFEGDNWLHLVQFVESMSEGGRHGKLSECDSSGTNLYVGFIKDKS 538
Query: 1657 M 1659
+
Sbjct: 539 V 539
>ref|XP_002282871.1| PREDICTED: beta-amylase 3, chloroplastic-like isoform 1 [Vitis
vinifera]
Length = 543
Score = 836 bits (2159), Expect = 0.0
Identities = 407/539 (75%), Positives = 456/539 (84%), Gaps = 1/539 (0%)
Frame = +1
Query: 43 MALTLRYSSSFINPIDTKNPKTTDEFVGSVSFPKTKHSYYCLRVKNSSVNEAQTSHEKTL 222
MALTLR S+SFINP DTK KT D S+ F +K C S EA HE +
Sbjct: 1 MALTLRSSTSFINPKDTKGLKTPD-ISSSIFFTPSKPP--CSIRAKISTQEAHLCHENAM 57
Query: 223 YFNGTGEERAERQHVLSN-QKKNGPKVPVYVMLPLDTVSIGGNLNRPKSLNASLMALKSA 399
G + + H L KNG +VPV+VMLPLDTVS GGNLN+P+++NASLMALKS+
Sbjct: 58 VSEG---RKNQVLHGLPTPHNKNGSRVPVFVMLPLDTVSFGGNLNKPRAMNASLMALKSS 114
Query: 400 GVEGVMVDAWWGLVEKNGPMNYNWKGYFDLVQMVEKHGLKIQVVMSFHQCGGNVGDSCSI 579
GVEGVMVDAWWGLVEK+GPM YNW+GY +LVQMV++HGLK+QVVMSFHQCGGNVGDSCSI
Sbjct: 115 GVEGVMVDAWWGLVEKDGPMKYNWEGYAELVQMVQRHGLKLQVVMSFHQCGGNVGDSCSI 174
Query: 580 PLPPWVLEEISNNPDLVYTDRSGRRNLEYISLGCDSLPVLRGRTPIQVYSDYMRSFRDHF 759
PLPPWVLEEIS N DLVYTDRSGRRN EYISLGCDS+PVLRGRTPIQVYSDYMRSF + F
Sbjct: 175 PLPPWVLEEISKNTDLVYTDRSGRRNPEYISLGCDSIPVLRGRTPIQVYSDYMRSFHNRF 234
Query: 760 KDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMKASLKATADAIG 939
KDYLG VI EIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYM+ASL+A+ADA+G
Sbjct: 235 KDYLGGVIAEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMRASLEASADAVG 294
Query: 940 KESWGTNGPHDSGQYNQFPEDTGFFRRDGTWNTDYGQFFLQWYSHKLIEHGDQILAAAQG 1119
K+ WG +GP D+G YNQFPEDTGFFRRDGTW T+YGQFFL+WYS KL+EHGD+ILAAA+G
Sbjct: 295 KKDWGRSGPQDAGHYNQFPEDTGFFRRDGTWTTEYGQFFLKWYSGKLLEHGDRILAAAEG 354
Query: 1120 IYRGTGAKLSGKVAGIHWHYNTRSHAAELTAGYYNTRHHDGYLPIAQMLGKRNAVLNFTC 1299
I++GTGAKLSGKVAGIHWHY TRSHAAELTAGYYNTR+HDGYLPIA+M+GK VLNFTC
Sbjct: 355 IFQGTGAKLSGKVAGIHWHYKTRSHAAELTAGYYNTRNHDGYLPIARMMGKYGVVLNFTC 414
Query: 1300 MEMRDGEQPASANCSPQGLVKQVKMATKLTGTELAGENALERYDEGAYAQVLETSRSDSG 1479
MEM+D EQ ANCSP+GLV+QVKMATK GTELAGENALERYD AYAQVL TSRSDSG
Sbjct: 415 MEMKDREQQEHANCSPEGLVRQVKMATKTAGTELAGENALERYDSSAYAQVLATSRSDSG 474
Query: 1480 NGLTAFTYLRLNKRMFEGDNWRNLVVFVNNMSEGGRMIRLSEYDSTGSDLYVGFIHDRK 1656
NGL+AFTYLR+NKR+FEGDNWR+LV FV NMSEGGR RL E DS+G+DLY+GFI +K
Sbjct: 475 NGLSAFTYLRMNKRLFEGDNWRSLVEFVRNMSEGGRN-RLPECDSSGTDLYIGFIKKKK 532
>emb|CAN62440.1| hypothetical protein VITISV_032500 [Vitis vinifera]
Length = 543
Score = 832 bits (2150), Expect = 0.0
Identities = 406/539 (75%), Positives = 454/539 (84%), Gaps = 1/539 (0%)
Frame = +1
Query: 43 MALTLRYSSSFINPIDTKNPKTTDEFVGSVSFPKTKHSYYCLRVKNSSVNEAQTSHEKTL 222
MALTLR S+SFINP DTK KT D S+ F +K C S EA HE +
Sbjct: 1 MALTLRSSTSFINPKDTKGLKTPD-ISSSIFFTPSKPP--CSIRAKISTQEAHLCHENAM 57
Query: 223 YFNGTGEERAERQHVLSN-QKKNGPKVPVYVMLPLDTVSIGGNLNRPKSLNASLMALKSA 399
G + + H L KNG +VPV+VMLPLDTVS GGNLN+P+++NASLMALKSA
Sbjct: 58 VSEG---RKNQVLHGLPTPHNKNGSRVPVFVMLPLDTVSFGGNLNKPRAMNASLMALKSA 114
Query: 400 GVEGVMVDAWWGLVEKNGPMNYNWKGYFDLVQMVEKHGLKIQVVMSFHQCGGNVGDSCSI 579
GVEGVMVDAWWGLVEK+GPM YNW+GY +LVQMV++HGLK+QVVMSFHQCGGNVGDSCSI
Sbjct: 115 GVEGVMVDAWWGLVEKDGPMKYNWEGYAELVQMVQRHGLKLQVVMSFHQCGGNVGDSCSI 174
Query: 580 PLPPWVLEEISNNPDLVYTDRSGRRNLEYISLGCDSLPVLRGRTPIQVYSDYMRSFRDHF 759
PLPPWVLEEIS N DLVYTDRSGRRN EYISLGCDS+PVLRGRTPIQVYSDYMRSF + F
Sbjct: 175 PLPPWVLEEISKNTDLVYTDRSGRRNPEYISLGCDSIPVLRGRTPIQVYSDYMRSFHNRF 234
Query: 760 KDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMKASLKATADAIG 939
KDYLG VI EIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYM+ASL+A+ADA+G
Sbjct: 235 KDYLGGVIAEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMRASLEASADAVG 294
Query: 940 KESWGTNGPHDSGQYNQFPEDTGFFRRDGTWNTDYGQFFLQWYSHKLIEHGDQILAAAQG 1119
K+ WG +GP D+G YNQFPEDTGFFRRDGTW T+YGQFFL+WYS KL+EHGD+ILAAA+G
Sbjct: 295 KKDWGRSGPQDAGHYNQFPEDTGFFRRDGTWTTEYGQFFLKWYSGKLLEHGDRILAAAEG 354
Query: 1120 IYRGTGAKLSGKVAGIHWHYNTRSHAAELTAGYYNTRHHDGYLPIAQMLGKRNAVLNFTC 1299
I++GTGAKLSGKVAGIHWHY TRSHAAELTAGYYNTR+HDGYLPIA+M+GK VLNFTC
Sbjct: 355 IFQGTGAKLSGKVAGIHWHYKTRSHAAELTAGYYNTRNHDGYLPIARMMGKYGVVLNFTC 414
Query: 1300 MEMRDGEQPASANCSPQGLVKQVKMATKLTGTELAGENALERYDEGAYAQVLETSRSDSG 1479
MEM+D EQ ANCSP+GLV+QVKMATK TELAGENALERYD AYAQVL TSRSDSG
Sbjct: 415 MEMKDREQQEHANCSPEGLVRQVKMATKTAXTELAGENALERYDSSAYAQVLATSRSDSG 474
Query: 1480 NGLTAFTYLRLNKRMFEGDNWRNLVVFVNNMSEGGRMIRLSEYDSTGSDLYVGFIHDRK 1656
NGL+AFTYLR+NKR+FEGDNWR+LV FV NMSEGGR RL E DS+G+D Y+GFI +K
Sbjct: 475 NGLSAFTYLRMNKRLFEGDNWRSLVEFVRNMSEGGRN-RLPECDSSGTDXYIGFIKKKK 532
>ref|XP_002517513.1| Beta-amylase, putative [Ricinus communis] gi|223543524|gb|EEF45055.1|
Beta-amylase, putative [Ricinus communis]
Length = 547
Score = 830 bits (2145), Expect = 0.0
Identities = 395/549 (71%), Positives = 459/549 (83%), Gaps = 2/549 (0%)
Frame = +1
Query: 43 MALTLRYSSSFINPIDTKNPKTTDEFVGSVSFPKTKHSYYCLRVKNSSVNEAQTSHEKTL 222
M+LTL S+SFIN DTK+ KT D+F G++ F + K S C +S+ EAQ S +
Sbjct: 1 MSLTLHSSTSFINIKDTKSVKTPDDFSGTICFAQIKPS--CRLGAKNSMQEAQLSQDNIF 58
Query: 223 YFNGTGEERAERQHVLSN-QKKNGPKVPVYVMLPLDTVSIGGNLNRPKSLNASLMALKSA 399
G + E+ H +SN Q N KVPV+VMLPLDTV++GGNLN+P+++NASLMALKSA
Sbjct: 59 TMEGRRSDNREKLHAMSNSQSSNDSKVPVFVMLPLDTVTLGGNLNKPRAMNASLMALKSA 118
Query: 400 GVEGVMVDAWWGLVEKNGPMNYNWKGYFDLVQMVEKHGLKIQVVMSFHQCGGNVGDSCSI 579
GVEGVMVDAWWGLVEK+GP YNW+GY DLV MV+KHGLK+QVVMSFHQCGGNVGDSCSI
Sbjct: 119 GVEGVMVDAWWGLVEKDGPRKYNWEGYADLVHMVQKHGLKLQVVMSFHQCGGNVGDSCSI 178
Query: 580 PLPPWVLEEISNNPDLVYTDRSGRRNLEYISLGCDSLPVLRGRTPIQVYSDYMRSFRDHF 759
PLPPWVLEEIS NPDLVYTDRSGRRN EYISLGCDSLPVLRGRTPIQVY+DYMRSF + F
Sbjct: 179 PLPPWVLEEISKNPDLVYTDRSGRRNPEYISLGCDSLPVLRGRTPIQVYTDYMRSFCNRF 238
Query: 760 KDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMKASLKATADAIG 939
+DYLG V+VEIQVGMGPCGELRYP+YPESNGTW+FPGIGEFQCYDKYMKASL+A+A+AIG
Sbjct: 239 RDYLGEVVVEIQVGMGPCGELRYPAYPESNGTWKFPGIGEFQCYDKYMKASLEASAEAIG 298
Query: 940 KESWGTNGPHDSGQYNQFPEDTGFFRRDGTWNTDYGQFFLQWYSHKLIEHGDQILAAAQG 1119
+ WG GPHD+G Y QFPE+TGFFRRDGTW T+YGQFFL+WYS KL++HGD+ILAAA+G
Sbjct: 299 NKDWGRGGPHDAGHYKQFPEETGFFRRDGTWKTEYGQFFLEWYSGKLLDHGDRILAAAKG 358
Query: 1120 IYRGTGAKLSGKVAGIHWHYNTRSHAAELTAGYYNTRHHDGYLPIAQMLGKRNAVLNFTC 1299
I++GTGAKLSGKVAGIHWHY TRSHA ELTAGYYNTRHHDGYL +A M K V NFTC
Sbjct: 359 IFQGTGAKLSGKVAGIHWHYRTRSHAPELTAGYYNTRHHDGYLTVAHMFSKHGVVFNFTC 418
Query: 1300 MEMRDGEQPASANCSPQGLVKQVKMATKLTGTELAGENALERYDEGAYAQVLETSRSDSG 1479
MEMRDGEQP AN SP+GLV+QVKMAT+ G ELAGENALERYD YAQVL TSRS+SG
Sbjct: 419 MEMRDGEQPGHANSSPEGLVRQVKMATRSAGVELAGENALERYDAAGYAQVLATSRSESG 478
Query: 1480 NGLTAFTYLRLNKRMFEGDNWRNLVVFVNNMSEGGRMIRLSEYDSTGSDLYVGFIHDRK- 1656
NGLTAFTYLR+NK++FEGD+W++LV FV +MSE G+ RL E DS G++LY+GFI D+
Sbjct: 479 NGLTAFTYLRMNKKLFEGDHWQHLVEFVKSMSEHGQNKRLPECDSEGTNLYIGFIKDKNA 538
Query: 1657 MNIKKVVLV 1683
+ K+V L+
Sbjct: 539 IRTKEVALL 547